Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c21_13310 Physcomitrium patens HOM05D000267 ORTHO05D009944 0.0e+00 1170.2 589 100.0
Cre17.g719500 Chlamydomonas reinhardtii HOM05D000267 ORTHO05D009944 9.6e-155 551.2 516 55.8
Cre13.g587500 Chlamydomonas reinhardtii HOM05D000267 ORTHO05D009944 6.9e-153 545.0 558 51.1
SMO367G0708 Selaginella moellendorffii HOM05D000267 ORTHO05D009944 4.2e-150 535.8 498 54.0
AagrBONN_evm.TU.Sc2ySwM_344.2069 Anthoceros agrestis HOM05D000267 ORTHO05D009944 1.2e-149 534.3 514 52.5
Pp3c3_37260 Physcomitrium patens HOM05D000267 ORTHO05D009944 5.6e-147 525.4 574 48.8
Mapoly0001s0154 Marchantia polymorpha HOM05D000267 ORTHO05D009944 1.4e-145 520.8 531 49.9
AagrBONN_evm.TU.Sc2ySwM_228.1198 Anthoceros agrestis HOM05D000267 ORTHO05D009944 9.6e-139 498.0 362 70.2
ATR0661G537 Amborella trichopoda HOM05D000267 ORTHO05D009944 8.8e-124 448.4 501 47.7
MCO05G576 Micromonas commoda HOM05D000267 ORTHO05D009944 1.0e-119 434.9 489 49.9
TWI79G0018 Tripterygium wilfordii HOM05D000267 ORTHO05D009944 1.0e-119 434.9 492 45.5
Actinidia18043 Actinidia chinensis HOM05D000267 ORTHO05D002764 4.2e-118 429.5 511 44.4
Prupe.8G168300 Prunus persica HOM05D000267 ORTHO05D009944 4.2e-118 429.5 540 43.3
TAR628G1652 Trochodendron aralioides HOM05D000267 ORTHO05D009944 5.5e-118 429.1 508 45.1
CsaV3_2G016240 Cucumis sativus L. HOM05D000267 ORTHO05D009944 2.7e-117 426.8 512 44.3
Thecc.02G056000 Theobroma cacao HOM05D000267 ORTHO05D009944 4.7e-117 426.0 498 45.6
CSS0022193 Camellia sinensis var. sinensis HOM05D000267 ORTHO05D009944 6.1e-117 425.6 492 45.1
QL11p051524 Quercus lobata HOM05D000267 ORTHO05D009944 2.0e-115 420.6 511 43.4
EL10Ac9g21344 Beta vulgaris HOM05D000267 ORTHO05D009944 3.3e-115 419.9 499 45.5
Manes.11G097600 Manihot esculenta HOM05D000267 ORTHO05D009944 4.4e-115 419.5 511 44.6
MBI05_g00165_MAGBIO Magnolia biondii HOM05D000267 ORTHO05D009944 5.7e-115 419.1 552 44.0
Dinv41920 Davidia involucrata HOM05D000267 ORTHO05D002764 7.4e-115 418.7 462 46.5
Gorai.008G037400 Gossypium raimondii HOM05D000267 ORTHO05D009944 2.2e-114 417.2 506 44.9
CiPaw.05G084800 Carya illinoinensis HOM05D000267 ORTHO05D009944 1.8e-113 414.1 549 42.3
Gohir.D12G036200 Gossypium hirsutum HOM05D000267 ORTHO05D009944 4.1e-113 412.9 506 45.1
THA.LOC104807804 Tarenaya hassleriana HOM05D000267 ORTHO05D009944 2.6e-112 410.2 514 43.2
ClCG02G012080 Citrullus lanatus HOM05D000267 ORTHO05D009944 7.7e-112 408.7 512 43.2
AUR62010015 Chenopodium quinoa HOM05D000267 ORTHO05D009944 3.8e-111 406.4 487 44.8
Migut.B00061 Erythranthe guttata HOM05D000267 ORTHO05D009944 6.5e-111 405.6 510 42.2
FvH4_2g15600 Fragaria vesca HOM05D000267 ORTHO05D009944 6.5e-111 405.6 574 41.1
AUR62013005 Chenopodium quinoa HOM05D000267 ORTHO05D009944 1.4e-110 404.4 522 42.9
Sc14g0002320 Simmondsia chinensis HOM05D000267 ORTHO05D009944 1.9e-110 404.1 482 44.0
FAN20G0365 Fragaria x ananassa HOM05D000267 ORTHO05D009944 7.2e-110 402.1 515 42.9
COL.COLO4_17372 Corchorus olitorius HOM05D000267 ORTHO05D009944 1.6e-109 401.0 540 42.8
CANSAT25G1222 Cannabis sativa HOM05D000267 ORTHO05D009944 4.7e-109 399.4 457 44.2
Rhsim11G0193400 Rhododendron simsii HOM05D000267 ORTHO05D009944 6.1e-109 399.1 544 40.8
Nitab4.5_0000079g0250 Nicotiana tabacum HOM05D000267 ORTHO05D000298 2.3e-108 397.1 500 41.8
GSVIVG01023990001 Vitis vinifera HOM05D000267 ORTHO05D009944 2.3e-108 397.1 493 43.4
Duzib132G0985 Durio zibethinus HOM05D000267 ORTHO05D009944 3.0e-108 396.7 506 43.5
Cfa005283 Carpinus fangiana HOM05D000267 ORTHO05D002764 8.8e-108 395.2 485 44.5
Potri.004G177400 Populus trichocarpa HOM05D000267 ORTHO05D009944 4.4e-107 392.9 498 41.0
Hma1.2p1_0163F.1_g072670 Hydrangea macrophylla HOM05D000267 ORTHO05D009944 5.7e-107 392.5 434 45.4
Cc09_g10270 Coffea canephora HOM05D000267 ORTHO05D009944 3.7e-106 389.8 486 44.0
MD05G1124600 Malus domestica HOM05D000267 ORTHO05D009944 3.7e-106 389.8 516 41.5
Cpa.g.sc20.108 Carica papaya HOM05D000267 ORTHO05D009944 1.6e-104 384.4 494 43.7
AUR62015150 Chenopodium quinoa HOM05D000267 ORTHO05D009944 1.0e-103 381.7 487 43.5
Eucgr.I01454 Eucalyptus grandis HOM05D000267 ORTHO05D009944 1.0e-103 381.7 514 41.8
Nitab4.5_0007484g0010 Nicotiana tabacum HOM05D000267 ORTHO05D009944 8.5e-103 378.6 508 41.1
Sed0004064 Sechium edule HOM05D000267 ORTHO05D009944 8.5e-103 378.6 512 42.0
Atru.chr5.3400 Acer truncatum HOM05D000267 ORTHO05D009944 1.1e-102 378.3 484 42.6
Nn5g30837 Nelumbo nucifera HOM05D000267 ORTHO05D009944 1.6e-101 374.4 406 47.5
Ciclev10028457m.g Citrus clementina HOM05D000267 ORTHO05D009944 4.7e-101 372.9 419 44.9
vmacro02289 Vaccinium macrocarpon HOM05D000267 ORTHO05D009944 1.0e-100 371.7 450 43.6
Os04g0560500 Oryza sativa ssp. japonica HOM05D000267 ORTHO05D009944 8.3e-98 362.1 545 36.7
MELO3C020832.2 Cucumis melo HOM05D000267 ORTHO05D009944 7.0e-97 359.0 527 39.7
FAN24G1303 Fragaria x ananassa HOM05D000267 ORTHO05D009944 2.7e-96 357.1 668 35.2
MCO05G735 Micromonas commoda HOM05D000267 ORTHO05D009944 1.3e-95 354.8 552 38.8
FAN27G0796 Fragaria x ananassa HOM05D000267 ORTHO05D009944 2.9e-95 353.6 618 37.1
Gohir.A12G036400 Gossypium hirsutum HOM05D000267 ORTHO05D009944 4.0e-92 343.2 420 44.0
PRCOL_00001600 Prasinoderma coloniale HOM05D000267 ORTHO05D009944 6.3e-90 335.9 523 42.4
SalBow1G0833 Salvia bowleyana HOM05D000267 ORTHO05D009944 2.7e-88 330.5 432 40.7
FAN15G3022 Fragaria x ananassa HOM05D000267 ORTHO05D009944 5.0e-87 326.2 519 38.9
Haze_02110 Corylus avellana HOM05D000267 ORTHO05D009944 1.9e-86 324.3 484 39.7
SEGI_10216 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 1.6e-85 321.2 306 55.9
Zm00001eb074100 Zea mays HOM05D000267 ORTHO05D009944 1.6e-85 321.2 523 35.9
Oeu015554.3 Olea europaea HOM05D000267 ORTHO05D002764 6.3e-82 309.3 373 43.7
SEGI_17018 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 2.0e-72 277.7 200 63.5
RcHm_v2.0_Chr6g0278781 Rosa chinensis HOM05D000267 ORTHO05D009944 2.7e-64 250.8 290 44.5
HPP92_001748 Vanilla planifolia HOM05D000267 ORTHO05D009944 1.5e-62 245.0 300 42.3
Ah.01g023200 Amaranthus hybridus HOM05D000267 ORTHO05D009944 5.2e-60 236.5 327 38.2
Atru.chr5.3388 Acer truncatum HOM05D000267 ORTHO05D009944 1.1e-54 218.8 417 32.9
Peaxi162Scf00078g01332 Petunia axillaris HOM05D000267 ORTHO05D009944 9.2e-49 199.1 207 48.3
SEGI_00421 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 1.0e-47 195.7 189 52.9
RcHm_v2.0_Chr6g0255801 Rosa chinensis HOM05D000267 ORTHO05D009944 1.9e-41 174.9 298 35.9
Hund06449 Selenicereus undatus HOM05D000267 ORTHO05D009944 2.3e-31 141.4 194 40.2
Actinidia20524 Actinidia chinensis HOM05D000267 ORTHO05D002764 1.1e-28 132.5 408 30.1
Atru.chr5.3392 Acer truncatum HOM05D000267 ORTHO05D009944 4.9e-26 123.6 289 28.0
RcHm_v2.0_Chr6g0278801 Rosa chinensis HOM05D000267 ORTHO05D009944 3.2e-25 120.9 193 36.3
SEGI_37732 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 6.7e-23 113.2 88 61.4
PRCOL_00001058 Prasinoderma coloniale HOM05D002360 ORTHO05D006971 4.5e-19 100.5 476 23.1
DCAR_006616 Daucus carota HOM05D002360 ORTHO05D006297 5.8e-19 100.1 455 24.0
CSS0031670 Camellia sinensis var. sinensis HOM05D002360 ORTHO05D006297 3.0e-15 87.8 518 22.4
Solyc01g097810.3 Solanum lycopersicum HOM05D002360 ORTHO05D006297 3.9e-15 87.4 461 23.4
Sopen01g041410 Solanum pennellii HOM05D002360 ORTHO05D006297 3.9e-15 87.4 461 23.4
PGSC0003DMG400022473 Solanum tuberosum HOM05D002360 ORTHO05D006297 5.1e-15 87.0 461 23.2
arahy.Tifrunner.gnm1.ann1.X7Z7AQ Arachis hypogaea HOM05D002360 ORTHO05D006297 6.7e-15 86.7 510 22.7
arahy.Tifrunner.gnm1.ann1.093KP0 Arachis hypogaea HOM05D002360 ORTHO05D006297 8.7e-15 86.3 524 22.7
PSO210G5722 Papaver somniferum HOM05D002360 ORTHO05D006297 8.7e-15 86.3 497 22.5
THA.LOC104821685 Tarenaya hassleriana HOM05D002360 ORTHO05D006297 8.7e-15 86.3 457 22.1
PSO761G0170 Papaver somniferum HOM05D002360 ORTHO05D006297 1.1e-14 85.9 497 22.5
PGR083G0408 Punica granatum HOM05D002360 ORTHO05D006297 1.5e-14 85.5 457 23.4
Thecc.05G288400 Theobroma cacao HOM05D002360 ORTHO05D006297 1.5e-14 85.5 511 22.5
Gohir.A11G255100 Gossypium hirsutum HOM05D002360 ORTHO05D006297 1.9e-14 85.1 456 21.1
CANSAT54G2096 Cannabis sativa HOM05D002360 ORTHO05D006297 2.5e-14 84.7 457 22.1
Gohir.D11G264800 Gossypium hirsutum HOM05D002360 ORTHO05D006297 2.5e-14 84.7 456 21.1
Gorai.007G284900 Gossypium raimondii HOM05D002360 ORTHO05D006297 2.5e-14 84.7 456 21.1
Actinidia05764 Actinidia chinensis HOM05D002360 ORTHO05D006297 3.3e-14 84.3 462 22.3
Peaxi162Scf00404g00021 Petunia axillaris HOM05D002360 ORTHO05D006297 3.3e-14 84.3 458 23.4
Potri.013G037700 Populus trichocarpa HOM05D002360 ORTHO05D006297 3.3e-14 84.3 457 21.4
TWI56G0866 Tripterygium wilfordii HOM05D002360 ORTHO05D006297 3.3e-14 84.3 460 22.0
Eucgr.H04384 Eucalyptus grandis HOM05D002360 ORTHO05D006297 4.3e-14 84.0 460 22.6
Eucgr.L02103 Eucalyptus grandis HOM05D002360 ORTHO05D006297 4.3e-14 84.0 460 22.6
FvH4_6g03420 Fragaria vesca HOM05D002360 ORTHO05D006297 4.3e-14 84.0 462 22.7
Cfa006458 Carpinus fangiana HOM05D002360 ORTHO05D006297 5.7e-14 83.6 462 21.9
FAN09G3371 Fragaria x ananassa HOM05D002360 ORTHO05D006297 5.7e-14 83.6 462 22.7
Manes.08G128100 Manihot esculenta HOM05D002360 ORTHO05D006297 5.7e-14 83.6 465 22.6
Peaxi162Scf00078g01331 Petunia axillaris HOM05D000267 ORTHO05D009944 5.7e-14 83.6 103 43.7
VMungo0720G1538 Vigna mungo HOM05D002360 ORTHO05D006297 7.4e-14 83.2 461 22.3
CDE10G0593 Ceratophyllum demersum HOM05D002360 ORTHO05D006297 1.3e-13 82.4 463 23.3
Phvul.007G186000 Phaseolus vulgaris HOM05D002360 ORTHO05D006297 1.3e-13 82.4 461 21.7
Haze_04332 Corylus avellana HOM05D002360 ORTHO05D006297 1.6e-13 82.0 462 21.6
Glyma.20G227900 Glycine max HOM05D002360 ORTHO05D006297 1.6e-13 82.0 463 21.4
Glyma.10G160500 Glycine max HOM05D002360 ORTHO05D006297 2.8e-13 81.3 462 21.2
Gorai.013G201600 Gossypium raimondii HOM05D002360 ORTHO05D006297 4.8e-13 80.5 511 21.9
TAR362G0813 Trochodendron aralioides HOM05D002360 ORTHO05D006297 4.8e-13 80.5 458 22.3
RcHm_v2.0_Chr6g0255791 Rosa chinensis HOM05D000267 ORTHO05D009944 1.1e-12 79.3 95 42.1
Gohir.D13G176200 Gossypium hirsutum HOM05D002360 ORTHO05D006297 1.4e-12 79.0 511 21.7
Gohir.A13G170700 Gossypium hirsutum HOM05D002360 ORTHO05D006297 3.1e-12 77.8 513 21.8
Duzib177G0875 Durio zibethinus HOM05D002360 ORTHO05D006297 1.7e-10 72.0 453 20.8
Dinv11540 Davidia involucrata HOM05D002360 ORTHO05D006297 2.9e-10 71.2 492 20.3
FAN02G3593 Fragaria x ananassa HOM05D002360 ORTHO05D006297 2.9e-10 71.2 465 21.9
Lj9A400T56 Lonicera japonica HOM05D000267 ORTHO05D009944 3.8e-10 70.9 74 44.6
FAN14G1113 Fragaria x ananassa HOM05D002360 ORTHO05D006297 1.9e-09 68.6 463 21.8
FAN05G4730 Fragaria x ananassa HOM05D002360 ORTHO05D006297 9.4e-09 66.2 331 23.0
Sabra04G0119300 Salix brachista HOM05D000267 ORTHO05D009944 9.4e-09 66.2 173 28.3
FAN05G4267 Fragaria x ananassa HOM05D002360 ORTHO05D006297 1.8e-07 62.0 331 22.4
Thecc.02G059600 Theobroma cacao HOM05D000267 ORTHO05D009944 6.7e-07 60.1 86 38.4
RcHm_v2.0_Chr2g0123001 Rosa chinensis HOM05D000267 ORTHO05D009944 7.4e-06 56.6 71 40.8


User provided reference genes

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