Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c21_10380 Physcomitrium patens HOM05D001109 ORTHO05D001051 3.8e-148 528.1 260 100.0
Pp3c18_18780 Physcomitrium patens HOM05D001109 ORTHO05D001051 4.8e-82 308.5 260 61.5
Pp3c22_3410 Physcomitrium patens HOM05D001109 ORTHO05D001051 1.4e-62 243.8 263 49.8
Pp3c12_16910 Physcomitrium patens HOM05D001109 ORTHO05D001051 3.4e-19 99.8 134 41.8
Mapoly0133s0012 Marchantia polymorpha HOM05D001109 ORTHO05D002316 4.9e-18 95.9 278 32.4
Pp3c4_8950 Physcomitrium patens HOM05D001109 ORTHO05D001051 1.8e-17 94.0 133 39.8
Pp3c3_32730 Physcomitrium patens HOM05D001109 ORTHO05D001051 1.2e-16 91.3 182 34.6
AagrBONN_evm.TU.Sc2ySwM_362.737 Anthoceros agrestis HOM05D001109 ORTHO05D001051 1.5e-11 74.3 159 32.1
CAN.G204.1 Capsicum annuum HOM05D002301 ORTHO05D002316 2.2e-10 70.5 173 27.7
Rhsim05G0141500 Rhododendron simsii HOM05D000865 ORTHO05D000739 2.2e-10 70.5 186 30.6
CAN.G354.67 Capsicum annuum HOM05D002301 ORTHO05D002316 2.9e-10 70.1 173 28.9
Nn4g22573 Nelumbo nucifera HOM05D002301 ORTHO05D002316 4.9e-10 69.3 176 28.4
MELO3C006931.2 Cucumis melo HOM05D002301 ORTHO05D002316 1.1e-09 68.2 157 29.9
Solyc06g036110.1 Solanum lycopersicum HOM05D002301 ORTHO05D002316 2.4e-09 67.0 163 28.2
CsaV3_3G017350 Cucumis sativus L. HOM05D002301 ORTHO05D002316 7.0e-09 65.5 157 29.9
SMO115G0119 Selaginella moellendorffii HOM05D001109 ORTHO05D001051 1.2e-08 64.7 153 28.1
Rhsim02G0010800 Rhododendron simsii HOM05D000407 ORTHO05D000739 1.6e-08 64.3 272 26.8
GSVIVG01031119001 Vitis vinifera HOM05D000865 ORTHO05D000739 1.6e-08 64.3 161 32.3
Migut.F00316 Erythranthe guttata HOM05D002301 ORTHO05D002316 2.1e-08 63.9 165 29.1
Ca_01948_v3 Cicer arietinum L. HOM05D000865 ORTHO05D000739 3.5e-08 63.2 172 30.8
Sopen06g011900 Solanum pennellii HOM05D002301 ORTHO05D002316 3.5e-08 63.2 163 27.0
Peaxi162Scf00848g00025 Petunia axillaris HOM05D002301 ORTHO05D002316 6.0e-08 62.4 195 28.2
Nitab4.5_0000080g0160 Nicotiana tabacum HOM05D002301 ORTHO05D002316 7.8e-08 62.0 163 27.0
Oeu045379.1 Olea europaea HOM05D002301 ORTHO05D002316 7.8e-08 62.0 158 29.1
vmacro06644 Vaccinium macrocarpon HOM05D002301 ORTHO05D002316 7.8e-08 62.0 159 28.3
Rhsim07G0186400 Rhododendron simsii HOM05D000865 ORTHO05D000739 1.0e-07 61.6 170 27.1
Actinidia19783 Actinidia chinensis HOM05D003060 ORTHO05D001716 1.3e-07 61.2 167 29.9
Gohir.D11G255901 Gossypium hirsutum HOM05D001109 ORTHO05D001051 1.3e-07 61.2 194 23.7
Gorai.007G274200 Gossypium raimondii HOM05D001109 ORTHO05D001051 1.3e-07 61.2 194 23.7
Sopen03g004180 Solanum pennellii HOM05D002301 ORTHO05D002316 1.3e-07 61.2 162 28.4
PGSC0003DMG400010115 Solanum tuberosum HOM05D002301 ORTHO05D002316 1.3e-07 61.2 162 28.4
Ah.04g160490 Amaranthus hybridus HOM05D000865 ORTHO05D000739 1.7e-07 60.8 161 29.2
Glyma.07G248600 Glycine max HOM05D000865 ORTHO05D000739 1.7e-07 60.8 173 26.6
Nn4g25898 Nelumbo nucifera HOM05D000865 ORTHO05D000739 2.3e-07 60.5 156 28.8
Nitab4.5_0012866g0010 Nicotiana tabacum HOM05D002301 ORTHO05D002316 2.3e-07 60.5 163 27.6
CiPaw.02G083700 Carya illinoinensis HOM05D000865 ORTHO05D000739 3.0e-07 60.1 165 29.1
HanXRQChr17g0566961 Helianthus annuus HOM05D000865 ORTHO05D000739 3.0e-07 60.1 156 28.2
TWI23G0797 Tripterygium wilfordii HOM05D002113 ORTHO05D002124 5.0e-07 59.3 161 26.7
Solyc03g025340.1 Solanum lycopersicum HOM05D002301 ORTHO05D002316 6.6e-07 58.9 162 27.8
Nitab4.5_0001625g0070 Nicotiana tabacum HOM05D002301 ORTHO05D002316 8.6e-07 58.5 229 25.3
Oeu016788.1 Olea europaea HOM05D002301 ORTHO05D002316 8.6e-07 58.5 158 28.5
unitig_46.g18799 Utricularia gibba HOM05D002301 ORTHO05D002316 8.6e-07 58.5 160 28.8
Peaxi162Scf00057g00021 Petunia axillaris HOM05D002301 ORTHO05D002316 1.1e-06 58.2 161 28.6
Peaxi162Scf00057g10023 Petunia axillaris HOM05D002301 ORTHO05D002316 1.1e-06 58.2 161 28.6
Peaxi162Scf50127g00001 Petunia axillaris HOM05D002301 ORTHO05D002316 1.1e-06 58.2 161 28.6
SMO351G0155 Selaginella moellendorffii HOM05D001109 ORTHO05D002316 1.1e-06 58.2 131 26.7
DCAR_024563 Daucus carota HOM05D000865 ORTHO05D000739 1.5e-06 57.8 160 29.4
Nitab4.5_0000084g0230 Nicotiana tabacum HOM05D002301 ORTHO05D002316 1.5e-06 57.8 238 26.1
TWI23G0711 Tripterygium wilfordii HOM05D002113 ORTHO05D002124 1.9e-06 57.4 97 28.9
TAR626G0715 Trochodendron aralioides HOM05D001109 ORTHO05D001051 1.9e-06 57.4 134 26.1
CSS0025346 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 2.5e-06 57.0 187 28.3
AagrBONN_evm.TU.Sc2ySwM_228.5483 Anthoceros agrestis HOM05D001109 ORTHO05D002316 3.3e-06 56.6 112 31.2
CAN.G236.17 Capsicum annuum HOM05D002301 ORTHO05D002316 4.3e-06 56.2 162 25.3
Manes.15G013300 Manihot esculenta HOM05D000865 ORTHO05D000739 4.3e-06 56.2 166 27.7
Rhsim02G0009700 Rhododendron simsii HOM05D000407 ORTHO05D000739 4.3e-06 56.2 180 26.1
unitig_37.g11966 Utricularia gibba HOM05D002301 ORTHO05D002316 4.3e-06 56.2 134 26.9
CiPaw.08G101400 Carya illinoinensis HOM05D000865 ORTHO05D000739 5.6e-06 55.8 192 28.1
PGSC0003DMG400024703 Solanum tuberosum HOM05D000865 ORTHO05D000739 5.6e-06 55.8 179 25.7
TWI23G0844 Tripterygium wilfordii HOM05D002113 ORTHO05D002124 5.6e-06 55.8 166 24.7
vmacro09823 Vaccinium macrocarpon HOM05D002301 ORTHO05D002316 5.6e-06 55.8 135 27.4
Aqoxy2G03021 Aquilegia oxysepala HOM05D000865 ORTHO05D000739 7.3e-06 55.5 160 28.8
CSS0011101 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 7.3e-06 55.5 173 30.1
DCAR_030533 Daucus carota HOM05D000865 ORTHO05D000739 9.5e-06 55.1 156 27.6
Oeu040760.1 Olea europaea HOM05D000865 ORTHO05D000739 9.5e-06 55.1 163 29.4
Rhsim02G0009800 Rhododendron simsii HOM05D000865 ORTHO05D000739 9.5e-06 55.1 274 24.8
Sc17g0003320 Simmondsia chinensis HOM05D000865 ORTHO05D000739 9.5e-06 55.1 157 31.2


User provided reference genes

Program Settings