Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 4.9e-45 184.1 93 100.0
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 1.9e-25 119.0 90 60.0
Pp3c15_25421 Physcomitrium patens HOM05D006090 ORTHO05D007600 9.5e-25 116.7 81 77.8
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 2.7e-19 98.6 89 50.6
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.6e-16 89.4 97 49.5
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 4.7e-16 87.8 94 48.9
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 4.7e-16 87.8 93 49.5
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 6.2e-16 87.4 93 49.5
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 6.2e-16 87.4 93 49.5
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 6.2e-16 87.4 93 47.3
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 8.1e-16 87.0 93 47.3
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 1.1e-15 86.7 93 48.4
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 1.1e-15 86.7 93 47.3
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 1.8e-15 85.9 93 48.4
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 1.8e-15 85.9 93 48.4
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 1.8e-15 85.9 93 48.4
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 1.8e-15 85.9 93 48.4
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.8e-15 85.9 93 46.2
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 1.8e-15 85.9 93 46.2
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 2.4e-15 85.5 93 48.4
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 2.4e-15 85.5 93 48.4
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 2.4e-15 85.5 93 49.5
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 3.1e-15 85.1 93 48.4
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 4.0e-15 84.7 93 47.3
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 4.0e-15 84.7 93 47.3
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 4.0e-15 84.7 93 47.3
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 4.0e-15 84.7 93 47.3
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 4.0e-15 84.7 93 48.4
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 4.0e-15 84.7 93 49.5
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 5.2e-15 84.3 93 46.2
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 6.8e-15 84.0 93 47.3
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 6.8e-15 84.0 93 48.4
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 6.8e-15 84.0 93 45.2
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 6.8e-15 84.0 93 46.2
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 6.8e-15 84.0 93 43.0
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 8.9e-15 83.6 93 46.2
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 1.2e-14 83.2 93 45.2
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 1.2e-14 83.2 90 45.6
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 1.2e-14 83.2 93 46.2
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 1.5e-14 82.8 93 47.3
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 1.5e-14 82.8 93 45.2
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 2.0e-14 82.4 93 46.2
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 2.0e-14 82.4 91 41.8
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 2.6e-14 82.0 89 49.4
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 2.6e-14 82.0 93 45.2
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 2.6e-14 82.0 93 46.2
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 2.6e-14 82.0 93 47.3
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 2.6e-14 82.0 93 47.3
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 2.6e-14 82.0 93 44.1
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 2.6e-14 82.0 93 44.1
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 3.4e-14 81.6 92 43.5
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 3.4e-14 81.6 93 45.2
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 3.4e-14 81.6 93 43.0
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 3.4e-14 81.6 93 45.2
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 4.4e-14 81.3 89 48.3
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 4.4e-14 81.3 93 41.9
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 4.4e-14 81.3 93 44.1
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 5.8e-14 80.9 93 46.2
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 5.8e-14 80.9 93 46.2
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 5.8e-14 80.9 90 45.6
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 5.8e-14 80.9 89 46.1
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 5.8e-14 80.9 93 45.2
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 5.8e-14 80.9 93 46.2
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 7.6e-14 80.5 93 44.1
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 9.9e-14 80.1 93 45.2
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 1.3e-13 79.7 93 43.0
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 1.3e-13 79.7 87 46.0
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.3e-13 79.7 89 43.8
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 1.7e-13 79.3 91 41.8
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 1.7e-13 79.3 89 46.1
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 2.2e-13 79.0 93 43.0
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 2.2e-13 79.0 93 43.0
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 2.2e-13 79.0 91 46.2
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 3.8e-13 78.2 93 44.1
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 3.8e-13 78.2 91 42.9
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 3.8e-13 78.2 93 44.1
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 3.8e-13 78.2 89 47.2
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 3.8e-13 78.2 89 42.7
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 4.9e-13 77.8 93 43.0
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 6.4e-13 77.4 92 46.7
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 8.4e-13 77.0 89 46.1
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 8.4e-13 77.0 93 44.1
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 8.4e-13 77.0 93 43.0
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.1e-12 76.6 93 40.9
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 1.1e-12 76.6 93 41.9
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.4e-12 76.3 93 46.2
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 1.4e-12 76.3 97 39.2
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 1.9e-12 75.9 89 46.1
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 2.4e-12 75.5 92 45.7
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 3.2e-12 75.1 92 46.7
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 3.2e-12 75.1 90 42.2
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 3.2e-12 75.1 93 43.0
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 4.2e-12 74.7 89 42.7
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 5.4e-12 74.3 89 47.2
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 5.4e-12 74.3 93 43.0
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 1.2e-11 73.2 89 38.2
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.2e-11 73.2 89 38.2
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 1.2e-11 73.2 89 39.3
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.6e-11 72.8 91 41.8
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 2.7e-11 72.0 56 57.1
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 4.6e-11 71.2 87 41.4
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 6.0e-11 70.9 92 40.2
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 1.0e-10 70.1 56 51.8
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.7e-10 69.3 99 33.3
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 1.7e-10 69.3 59 52.5
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 3.9e-10 68.2 55 54.5
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 5.6e-09 64.3 51 60.8
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 9.6e-09 63.5 127 32.3
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 6.2e-08 60.8 72 43.1
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 6.2e-08 60.8 73 42.5
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 8.1e-08 60.5 89 37.1
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 8.1e-08 60.5 89 37.1
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 8.1e-08 60.5 79 39.2
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 3.1e-07 58.5 73 41.1
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 6.9e-07 57.4 72 43.1
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 1.2e-06 56.6 73 42.5
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 2.0e-06 55.8 71 46.5
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 2.6e-06 55.5 86 37.2
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 3.4e-06 55.1 73 41.1


User provided reference genes

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