Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_8910 Physcomitrium patens HOM05D006071 ORTHO05D007462 0.0e+00 1636.3 852 100.0
Mapoly0006s0082 Marchantia polymorpha HOM05D006071 ORTHO05D007462 2.8e-179 633.3 856 47.7
SMO141G0304 Selaginella moellendorffii HOM05D006071 ORTHO05D007462 2.1e-139 500.7 876 40.3
SEGI_23511 Sequoiadendron giganteum HOM05D006071 ORTHO05D007462 7.4e-132 475.7 709 44.0
CBR_g4363 Chara braunii HOM05D006071 ORTHO05D007462 3.3e-116 423.7 810 37.4
ATR0582G122 Amborella trichopoda HOM05D006071 ORTHO05D007462 3.5e-113 413.7 752 39.6
RcHm_v2.0_Chr2g0176461 Rosa chinensis HOM05D006071 ORTHO05D007462 3.5e-113 413.7 758 38.1
Os02g0516600 Oryza sativa ssp. japonica HOM05D006071 ORTHO05D007462 5.9e-113 412.9 720 38.2
FAN09G3006 Fragaria x ananassa HOM05D006071 ORTHO05D007462 5.0e-112 409.8 727 38.7
Hma1.2p1_0421F.1_g149970 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 1.1e-111 408.7 733 38.2
MBI07_g41894_MAGBIO Magnolia biondii HOM05D006071 ORTHO05D007462 1.5e-111 408.3 796 37.2
Gorai.011G088400 Gossypium raimondii HOM05D006071 ORTHO05D007462 3.2e-111 407.1 709 38.1
Dinv33279 Davidia involucrata HOM05D006071 ORTHO05D007462 5.5e-111 406.4 780 37.7
Gohir.D10G081100 Gossypium hirsutum HOM05D006071 ORTHO05D007462 5.5e-111 406.4 709 37.7
Aqoxy5G03151 Aquilegia oxysepala HOM05D006071 ORTHO05D007462 2.7e-110 404.1 713 38.7
Gohir.A10G070000 Gossypium hirsutum HOM05D006071 ORTHO05D007462 3.6e-110 403.7 699 38.3
arahy.Tifrunner.gnm1.ann1.FR25D6 Arachis hypogaea HOM05D006071 ORTHO05D007462 4.7e-110 403.3 742 37.1
Lalb_Chr24g0403151 Lupinus albus HOM05D006071 ORTHO05D007462 6.1e-110 402.9 837 36.0
arahy.Tifrunner.gnm1.ann1.FMKW1Y Arachis hypogaea HOM05D006071 ORTHO05D007462 1.0e-109 402.1 742 36.9
TPR.G10339 Trifolium pratense HOM05D006071 ORTHO05D007462 1.4e-109 401.7 762 36.5
Glyma.16G048700 Glycine max HOM05D006071 ORTHO05D007462 5.2e-109 399.8 715 38.3
Zm00001eb242020 Zea mays HOM05D006071 ORTHO05D007462 6.7e-109 399.4 718 37.7
Rhsim10G0001400 Rhododendron simsii HOM05D006071 ORTHO05D007462 4.4e-108 396.7 760 37.8
VMungo1383G1903 Vigna mungo HOM05D006071 ORTHO05D007462 1.3e-107 395.2 713 36.6
Glyma.19G103000 Glycine max HOM05D006071 ORTHO05D007462 1.7e-107 394.8 713 37.4
Medtr7g084020 Medicago truncatula HOM05D006071 ORTHO05D007462 1.7e-107 394.8 767 37.2
MD17G1007100 Malus domestica HOM05D006071 ORTHO05D007462 2.2e-107 394.4 736 38.3
AagrBONN_evm.TU.Sc2ySwM_344.4297 Anthoceros agrestis HOM05D006071 ORTHO05D007462 4.8e-107 393.3 820 37.4
Nn4g22141 Nelumbo nucifera HOM05D006071 ORTHO05D007462 4.8e-107 393.3 742 38.1
Thecc.04G047500 Theobroma cacao HOM05D006071 ORTHO05D007462 1.1e-106 392.1 734 37.1
DCAR_014471 Daucus carota HOM05D006071 ORTHO05D007462 1.8e-106 391.3 764 36.4
FAN14G4217 Fragaria x ananassa HOM05D006071 ORTHO05D007462 4.1e-106 390.2 729 39.2
Lsat_1_v5_gn_0_22580 Lactuca sativa HOM05D006071 ORTHO05D007462 4.1e-106 390.2 750 37.3
Prupe.3G313200 Prunus persica HOM05D006071 ORTHO05D007462 5.3e-106 389.8 714 38.1
PGR142G0457 Punica granatum HOM05D006071 ORTHO05D007462 5.3e-106 389.8 822 35.9
ECA246G2252 Erigeron canadensis HOM05D006071 ORTHO05D007462 7.0e-106 389.4 750 37.2
HanXRQChr17g0550941 Helianthus annuus HOM05D006071 ORTHO05D007462 1.2e-105 388.7 837 34.4
Manes.11G077000 Manihot esculenta HOM05D006071 ORTHO05D007462 1.6e-105 388.3 746 36.9
Ah.03g136370 Amaranthus hybridus HOM05D006071 ORTHO05D007462 2.0e-105 387.9 749 36.3
Hund04198 Selenicereus undatus HOM05D006071 ORTHO05D007462 2.0e-105 387.9 735 37.1
CANSAT64G2805 Cannabis sativa HOM05D006071 ORTHO05D007462 2.7e-105 387.5 745 35.3
Lj1g0026027 Lotus japonicus HOM05D006071 ORTHO05D007462 1.0e-104 385.6 694 36.7
Potri.014G145300 Populus trichocarpa HOM05D006071 ORTHO05D007462 1.3e-104 385.2 740 37.3
Phvul.001G084800 Phaseolus vulgaris HOM05D006071 ORTHO05D007462 3.8e-104 383.6 715 37.2
QL02p069613 Quercus lobata HOM05D006071 ORTHO05D007462 3.8e-104 383.6 733 34.2
Ciclev10014332m.g Citrus clementina HOM05D006071 ORTHO05D007462 8.5e-104 382.5 831 34.4
EL10Ac6g13395 Beta vulgaris HOM05D006071 ORTHO05D007462 1.5e-103 381.7 756 35.8
MELO3C014817.2 Cucumis melo HOM05D006071 ORTHO05D007462 2.5e-103 380.9 747 36.3
TAR629G1421 Trochodendron aralioides HOM05D006071 ORTHO05D007462 2.5e-103 380.9 717 36.7
TWI32G0148 Tripterygium wilfordii HOM05D006071 ORTHO05D007462 5.5e-103 379.8 736 37.1
Ca_08138_v3 Cicer arietinum L. HOM05D006071 ORTHO05D007462 7.2e-103 379.4 744 37.6
CsaV3_3G027770 Cucumis sativus L. HOM05D006071 ORTHO05D007462 7.2e-103 379.4 748 36.5
Sc07g0003750 Simmondsia chinensis HOM05D006071 ORTHO05D007462 7.2e-103 379.4 762 35.0
PSO017G0597 Papaver somniferum HOM05D006071 ORTHO05D007462 9.4e-103 379.0 793 35.3
MD09G1003000 Malus domestica HOM05D006071 ORTHO05D007462 2.1e-102 377.9 647 39.4
vmacro22244 Vaccinium macrocarpon HOM05D006071 ORTHO05D007462 2.1e-102 377.9 766 37.2
Thhalv10003691m.g Eutrema salsugineum HOM05D006071 ORTHO05D007462 4.7e-102 376.7 736 35.9
Aa31LG2G5830 Aethionema arabicum HOM05D006071 ORTHO05D007462 6.1e-102 376.3 732 36.5
ClCG05G012640 Citrullus lanatus HOM05D006071 ORTHO05D007462 1.8e-101 374.8 737 36.4
PSO478G4855 Papaver somniferum HOM05D006071 ORTHO05D007462 1.8e-101 374.8 796 36.8
CDE05G0431 Ceratophyllum demersum HOM05D000877 ORTHO05D001509 2.3e-101 374.4 767 36.2
Haze_14947 Corylus avellana HOM05D006071 ORTHO05D007462 2.3e-101 374.4 767 35.9
Lju41A60G26 Lonicera japonica HOM05D006071 ORTHO05D007462 8.8e-101 372.5 743 36.6
THA.LOC104805300 Tarenaya hassleriana HOM05D006071 ORTHO05D007462 1.2e-100 372.1 746 34.9
Duzib187G0315 Durio zibethinus HOM05D006071 ORTHO05D007462 1.5e-100 371.7 768 34.9
AUR62037834 Chenopodium quinoa HOM05D006071 ORTHO05D007462 2.0e-100 371.3 742 35.8
CSS0001742 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 9.8e-100 369.0 695 36.8
FAN02G4165 Fragaria x ananassa HOM05D006071 ORTHO05D007462 9.8e-100 369.0 665 37.9
MSTRG.15572 Avicennia marina HOM05D006071 ORTHO05D007462 3.7e-99 367.1 790 35.6
Peaxi162Scf00420g00836 Petunia axillaris HOM05D006071 ORTHO05D007462 4.8e-99 366.7 741 35.8
BcaB07g30217 Brassica carinata HOM05D006071 ORTHO05D007462 6.3e-99 366.3 760 35.5
Nitab4.5_0000519g0320 Nicotiana tabacum HOM05D006071 ORTHO05D007462 1.1e-98 365.5 799 34.3
Sabra14G0109500 Salix brachista HOM05D006071 ORTHO05D007462 2.4e-98 364.4 716 36.3
Sp2g15850 Schrenkiella parvula HOM05D006071 ORTHO05D007462 3.1e-98 364.0 699 35.1
AT3G26730 Arabidopsis thaliana HOM05D006071 ORTHO05D007462 5.4e-98 363.2 729 36.5
A02p34700 Brassica napus HOM05D006071 ORTHO05D007462 9.1e-98 362.5 727 36.5
Carub.0005s0473 Capsella rubella HOM05D006071 ORTHO05D007462 1.6e-97 361.7 728 36.0
HPP92_024403 Vanilla planifolia HOM05D006071 ORTHO05D007462 1.6e-97 361.7 773 35.8
BraA02t08478Z Brassica rapa HOM05D006071 ORTHO05D007462 2.7e-97 360.9 743 36.2
FvH4_6g54271 Fragaria vesca HOM05D006071 ORTHO05D007462 2.7e-97 360.9 574 38.7
Sed0023591 Sechium edule HOM05D006071 ORTHO05D007462 2.7e-97 360.9 739 36.1
Cc07_g01250 Coffea canephora HOM05D006071 ORTHO05D007462 7.7e-97 359.4 742 35.7
SGA_v2.0_scaffold47G17632 Striga asiatica HOM05D006071 ORTHO05D007462 6.5e-96 356.3 762 34.8
AL5G15580 Arabidopsis lyrata HOM05D006071 ORTHO05D007462 1.5e-95 355.1 726 35.1
CARHR147750 Cardamine hirsuta HOM05D006071 ORTHO05D007462 1.5e-95 355.1 750 35.1
Sopen02g039190 Solanum pennellii HOM05D006071 ORTHO05D007462 5.5e-95 353.2 749 35.4
Migut.K01485 Erythranthe guttata HOM05D006071 ORTHO05D007462 7.2e-95 352.8 839 33.8
Nitab4.5_0002172g0120 Nicotiana tabacum HOM05D006071 ORTHO05D007462 1.2e-94 352.1 805 33.9
CiPaw.03G002300 Carya illinoinensis HOM05D006071 ORTHO05D007462 8.0e-94 349.4 692 35.4
Eucgr.I01601 Eucalyptus grandis HOM05D006071 ORTHO05D007462 1.0e-93 349.0 756 35.4
Hma1.2p1_0421F.1_g149975 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 2.0e-92 344.7 549 37.7
C02p53260 Brassica napus HOM05D006071 ORTHO05D007462 3.4e-92 344.0 860 33.3
GSVIVG01032990001 Vitis vinifera HOM05D006071 ORTHO05D007462 2.2e-91 341.3 754 34.6
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 2.8e-91 340.9 856 33.1
Actinidia36244 Actinidia chinensis HOM05D000877 ORTHO05D001509 6.3e-91 339.7 637 36.4
BolC2t11398H Brassica oleracea HOM05D006071 ORTHO05D007462 4.5e-89 333.6 860 33.0
Oeu003415.3 Olea europaea HOM05D006071 ORTHO05D007462 4.9e-83 313.5 754 32.2
unitig_0.g2406 Utricularia gibba HOM05D006071 ORTHO05D007462 4.3e-79 300.4 570 35.1
Atru.chr6.2689 Acer truncatum HOM05D006071 ORTHO05D007462 6.8e-77 293.1 493 38.5
Hma1.2p1_0033F.1_g021090 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 4.1e-74 283.9 555 36.2
AUR62041072 Chenopodium quinoa HOM05D006071 ORTHO05D007462 5.4e-66 256.9 468 35.0
Psat3g093480 Pisum sativum HOM05D006071 ORTHO05D007462 4.1e-58 230.7 573 32.1
SHI11389 Sapria himalayana HOM05D006071 ORTHO05D007462 1.8e-53 215.3 266 41.7
COL.COLO4_13369 Corchorus olitorius HOM05D006071 ORTHO05D007462 7.1e-50 203.4 648 28.9
MCO15G395 Micromonas commoda HOM05D006071 ORTHO05D007462 1.4e-45 189.1 744 26.5
Cre03.g144687 Chlamydomonas reinhardtii HOM05D006071 ORTHO05D007462 2.0e-44 185.3 623 26.6
Solyc02g094510.4 Solanum lycopersicum HOM05D006071 ORTHO05D007462 2.1e-41 175.3 281 41.6
Duzib147G1044 Durio zibethinus HOM05D006071 ORTHO05D007462 7.9e-41 173.3 678 27.6
CSS0035612 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 6.0e-33 147.1 522 26.1
CDE05G1324 Ceratophyllum demersum HOM05D006071 ORTHO05D007462 3.9e-32 144.4 114 58.8
AUR62041071 Chenopodium quinoa HOM05D006071 ORTHO05D007462 6.0e-25 120.6 238 37.4
Cre16.g681251 Chlamydomonas reinhardtii HOM05D006071 ORTHO05D007462 2.2e-22 112.1 269 32.0
HanXRQChr17g0550951 Helianthus annuus HOM05D006071 ORTHO05D007462 1.0e-16 93.2 241 32.8
HanXRQChr17g0550971 Helianthus annuus HOM05D006071 ORTHO05D007462 2.8e-14 85.1 275 27.3
Psat2g087400 Pisum sativum HOM05D006071 ORTHO05D007462 9.1e-13 80.1 196 29.6
Psat2g052360 Pisum sativum HOM05D006071 ORTHO05D007462 1.5e-12 79.3 119 37.8
Psat0s2046g0080 Pisum sativum HOM05D006071 ORTHO05D007462 3.6e-09 68.2 129 32.6
Lj1g0013684 Lotus japonicus HOM05D006071 ORTHO05D007462 7.9e-09 67.0 129 38.0
Atru.chr6.2690 Acer truncatum HOM05D006071 ORTHO05D007462 1.4e-08 66.2 92 41.3


User provided reference genes

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