Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_8300 Physcomitrium patens HOM05D008218 ORTHO05D010347 1.8e-66 255.8 129 100.0
Pp3c23_15470 Physcomitrium patens HOM05D008218 ORTHO05D010347 5.4e-18 94.7 53 88.7
TWI36G0894 Tripterygium wilfordii HOM05D008218 ORTHO05D010347 2.7e-09 65.9 50 78.0
Mapoly0087s0005 Marchantia polymorpha HOM05D008218 ORTHO05D010347 3.5e-09 65.5 50 76.0
PSO170G1121 Papaver somniferum HOM05D008218 ORTHO05D010347 6.0e-09 64.7 49 75.5
PSO170G3918 Papaver somniferum HOM05D008218 ORTHO05D010347 6.0e-09 64.7 49 75.5
RcHm_v2.0_Chr6g0284071 Rosa chinensis HOM05D008218 ORTHO05D010347 7.8e-09 64.3 50 74.0
PSO357G0222 Papaver somniferum HOM05D008218 ORTHO05D010347 2.3e-08 62.8 49 73.5
Hma1.2p1_0149F.1_g066410 Hydrangea macrophylla HOM05D008218 ORTHO05D010347 3.0e-08 62.4 50 72.0
Prupe.8G198600 Prunus persica HOM05D008218 ORTHO05D010347 3.9e-08 62.0 50 72.0
Gohir.A11G139700 Gossypium hirsutum HOM05D008218 ORTHO05D010347 5.0e-08 61.6 49 71.4
PSO017G0111 Papaver somniferum HOM05D008218 ORTHO05D010347 6.6e-08 61.2 49 73.5
Phvul.008G131550 Phaseolus vulgaris HOM05D008218 ORTHO05D010347 1.5e-07 60.1 50 68.0
Lsat_1_v5_gn_2_120021 Lactuca sativa HOM05D009582 ORTHO05D010347 3.3e-07 58.9 49 73.5
TWI75G0809 Tripterygium wilfordii HOM05D008218 ORTHO05D010347 7.3e-07 57.8 50 72.0
Gohir.A07G161100 Gossypium hirsutum HOM05D008218 ORTHO05D010347 9.5e-07 57.4 50 70.0
Gohir.D07G164600 Gossypium hirsutum HOM05D008218 ORTHO05D010347 9.5e-07 57.4 50 70.0
Potri.002G246300 Populus trichocarpa HOM05D008218 ORTHO05D010347 9.5e-07 57.4 50 70.0
TWI18G1398 Tripterygium wilfordii HOM05D008218 ORTHO05D010347 9.5e-07 57.4 50 70.0
Thhalv10021897m.g Eutrema salsugineum HOM05D008218 ORTHO05D010347 1.2e-06 57.0 50 72.0
Solyc06g063400.3 Solanum lycopersicum HOM05D008218 ORTHO05D010347 1.2e-06 57.0 50 68.0
COL.COLO4_08652 Corchorus olitorius HOM05D008218 ORTHO05D010347 1.6e-06 56.6 50 70.0
CsaV3_3G030050 Cucumis sativus L. HOM05D008218 ORTHO05D010347 1.6e-06 56.6 50 66.0
Solyc06g063390.3 Solanum lycopersicum HOM05D008218 ORTHO05D010347 1.6e-06 56.6 51 68.6
THA.LOC104818972 Tarenaya hassleriana HOM05D008218 ORTHO05D010347 1.6e-06 56.6 50 70.0
THA.LOC104822489 Tarenaya hassleriana HOM05D008218 ORTHO05D010347 1.6e-06 56.6 50 70.0
AL3G18510 Arabidopsis lyrata HOM05D008218 ORTHO05D010347 2.8e-06 55.8 50 70.0
AT3G07230 Arabidopsis thaliana HOM05D008218 ORTHO05D010347 2.8e-06 55.8 50 70.0
BcaC05g29851 Brassica carinata HOM05D003583 ORTHO05D004169 2.8e-06 55.8 55 60.0
Carub.0003s0676 Capsella rubella HOM05D008218 ORTHO05D010347 2.8e-06 55.8 50 70.0
CARHR081880 Cardamine hirsuta HOM05D008218 ORTHO05D010347 2.8e-06 55.8 50 70.0
PGSC0003DMG400007753 Solanum tuberosum HOM05D008218 ORTHO05D010347 2.8e-06 55.8 46 69.6
FAN27G2427 Fragaria x ananassa HOM05D008218 ORTHO05D010347 3.6e-06 55.5 45 71.1
A03p35150 Brassica napus HOM05D008218 ORTHO05D010347 4.7e-06 55.1 49 65.3
FAN15G3347 Fragaria x ananassa HOM05D008218 ORTHO05D010347 4.7e-06 55.1 45 71.1
Aa31LG5G17820 Aethionema arabicum HOM05D008218 ORTHO05D010347 6.2e-06 54.7 50 68.0
Gohir.D11G145833 Gossypium hirsutum HOM05D008218 ORTHO05D010347 6.2e-06 54.7 50 68.0
Lalb_Chr19g0125871 Lupinus albus HOM05D008218 ORTHO05D010347 6.2e-06 54.7 50 68.0
Nitab4.5_0013864g0040 Nicotiana tabacum HOM05D008218 ORTHO05D010347 6.2e-06 54.7 49 67.3
Hund18437 Selenicereus undatus HOM05D008218 ORTHO05D010347 6.2e-06 54.7 60 60.0
Thecc.01G219400 Theobroma cacao HOM05D008218 ORTHO05D010347 6.2e-06 54.7 50 68.0
CiPaw.13G048900 Carya illinoinensis HOM05D008218 ORTHO05D010347 8.1e-06 54.3 50 66.0


User provided reference genes

Program Settings