Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_5680 Physcomitrium patens HOM05D004954 ORTHO05D006267 0.0e+00 1206.8 617 100.0
SMO367G0402 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 1.2e-248 863.2 622 69.8
ATR0824G007 Amborella trichopoda HOM05D004954 ORTHO05D006267 6.8e-244 847.4 617 67.6
Mapoly0098s0023 Marchantia polymorpha HOM05D004954 ORTHO05D006267 8.6e-239 830.5 617 68.9
Nn8g39913 Nelumbo nucifera HOM05D004954 ORTHO05D006267 4.6e-232 808.1 615 64.4
MBI18_g30537_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 3.3e-230 802.0 630 63.8
PSO170G3087 Papaver somniferum HOM05D004954 ORTHO05D006267 1.2e-227 793.5 615 63.4
PSO063G7187 Papaver somniferum HOM05D004954 ORTHO05D006267 2.0e-227 792.7 615 63.3
CANSAT01G1324 Cannabis sativa HOM05D004954 ORTHO05D006267 1.3e-226 790.0 615 62.9
Gorai.N003600 Gossypium raimondii HOM05D004954 ORTHO05D006267 6.4e-226 787.7 615 62.8
Gohir.D07G166900 Gossypium hirsutum HOM05D004954 ORTHO05D006267 1.4e-225 786.6 615 62.6
Duzib211G0600 Durio zibethinus HOM05D004954 ORTHO05D006267 1.9e-225 786.2 615 62.6
Prupe.8G191000 Prunus persica HOM05D004954 ORTHO05D006267 7.8e-224 780.8 615 61.8
Gohir.A07G159500 Gossypium hirsutum HOM05D004954 ORTHO05D006267 1.0e-223 780.4 615 62.3
THA.LOC104818994 Tarenaya hassleriana HOM05D004954 ORTHO05D006267 3.9e-223 778.5 615 63.1
A06p39130 Brassica napus HOM05D004954 ORTHO05D006267 6.6e-223 777.7 615 62.8
PGR044G2625 Punica granatum HOM05D004954 ORTHO05D006267 6.6e-223 777.7 615 62.3
CSS0025127 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 8.6e-223 777.3 615 61.5
BolC7t44441H Brassica oleracea HOM05D004954 ORTHO05D006267 1.1e-222 776.9 615 62.6
C07p39210 Brassica napus HOM05D004954 ORTHO05D006267 5.6e-222 774.6 615 62.4
Thecc.01G211600 Theobroma cacao HOM05D004954 ORTHO05D006267 9.5e-222 773.9 615 62.1
Cc01_g16190 Coffea canephora HOM05D004954 ORTHO05D006267 3.6e-221 771.9 614 62.1
MD10G1152500 Malus domestica HOM05D004954 ORTHO05D006267 3.6e-221 771.9 615 61.6
QL09p046153 Quercus lobata HOM05D004954 ORTHO05D006267 8.1e-221 770.8 615 61.5
CiPaw.13G054900 Carya illinoinensis HOM05D004954 ORTHO05D006267 1.1e-220 770.4 615 60.8
VMungo0251G2039 Vigna mungo HOM05D004954 ORTHO05D006267 1.4e-220 770.0 615 60.8
Sed0007567 Sechium edule HOM05D004954 ORTHO05D006267 2.3e-220 769.2 615 62.0
HanXRQChr01g0007231 Helianthus annuus HOM05D004954 ORTHO05D006267 5.2e-220 768.1 616 61.9
Eucgr.H00730 Eucalyptus grandis HOM05D004954 ORTHO05D006267 6.8e-220 767.7 615 61.1
CsaV3_7G026900 Cucumis sativus L. HOM05D004954 ORTHO05D006267 8.9e-220 767.3 617 61.4
Thhalv10003836m.g Eutrema salsugineum HOM05D004954 ORTHO05D006267 8.9e-220 767.3 615 62.1
Sp2g18880 Schrenkiella parvula HOM05D004954 ORTHO05D006267 1.2e-219 766.9 615 62.0
Actinidia34548 Actinidia chinensis HOM05D004954 ORTHO05D006267 2.0e-219 766.1 615 60.8
Phvul.003G003500 Phaseolus vulgaris HOM05D004954 ORTHO05D006267 2.6e-219 765.8 615 60.7
ECA248G3210 Erigeron canadensis HOM05D004954 ORTHO05D006267 5.8e-219 764.6 615 60.8
AT5G48520 Arabidopsis thaliana HOM05D004954 ORTHO05D006267 7.5e-219 764.2 615 61.8
MELO3C012723.2 Cucumis melo HOM05D004954 ORTHO05D006267 1.3e-218 763.5 615 61.3
AagrBONN_evm.TU.Sc2ySwM_344.252 Anthoceros agrestis HOM05D004954 ORTHO05D006267 2.2e-218 762.7 646 60.4
Dinv10429 Davidia involucrata HOM05D004954 ORTHO05D006267 2.9e-218 762.3 615 60.8
SalBow6G4493 Salvia bowleyana HOM05D004954 ORTHO05D006267 2.9e-218 762.3 615 61.0
Carub.0008s0810 Capsella rubella HOM05D004954 ORTHO05D006267 8.3e-218 760.8 616 61.4
BraA06t26827Z Brassica rapa HOM05D004954 ORTHO05D006267 2.4e-217 759.2 648 59.6
Lj1C100T5 Lonicera japonica HOM05D004954 ORTHO05D006267 2.4e-217 759.2 617 61.4
Aqoxy7G02924 Aquilegia oxysepala HOM05D004954 ORTHO05D006267 4.1e-217 758.4 614 61.7
Rhsim13G0052400 Rhododendron simsii HOM05D004954 ORTHO05D006267 2.1e-216 756.1 641 59.1
Lalb_Chr19g0124251 Lupinus albus HOM05D004954 ORTHO05D006267 2.3e-215 752.7 615 60.3
RcHm_v2.0_Chr6g0282881 Rosa chinensis HOM05D004954 ORTHO05D006267 3.0e-215 752.3 615 60.3
Potri.014G191100 Populus trichocarpa HOM05D004954 ORTHO05D006267 3.9e-215 751.9 615 60.5
ClCG09G008140 Citrullus lanatus HOM05D004954 ORTHO05D006267 6.6e-215 751.1 615 60.8
Glyma.17G145700 Glycine max HOM05D004954 ORTHO05D006267 6.6e-215 751.1 617 60.1
MSTRG.21308 Avicennia marina HOM05D004954 ORTHO05D006267 1.1e-214 750.4 616 60.7
FAN27G0710 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.9e-214 749.6 625 59.2
Dinv28815 Davidia involucrata HOM05D004954 ORTHO05D006267 3.3e-214 748.8 616 59.9
FAN24G2804 Fragaria x ananassa HOM05D004954 ORTHO05D006267 3.3e-214 748.8 625 59.7
TWI18G0293 Tripterygium wilfordii HOM05D004954 ORTHO05D006267 4.3e-214 748.4 615 59.2
DCAR_012691 Daucus carota HOM05D004954 ORTHO05D006267 7.3e-214 747.7 618 59.7
BcaC06g30786 Brassica carinata HOM05D004954 ORTHO05D006267 1.2e-213 746.9 615 60.8
Ciclev10004559m.g Citrus clementina HOM05D004954 ORTHO05D006267 2.1e-213 746.1 615 59.3
arahy.Tifrunner.gnm1.ann1.4YG7MF Arachis hypogaea HOM05D004954 ORTHO05D006267 3.6e-213 745.3 616 59.7
arahy.Tifrunner.gnm1.ann1.E22JQ7 Arachis hypogaea HOM05D004954 ORTHO05D006267 3.6e-213 745.3 616 59.7
Oeu003633.1 Olea europaea HOM05D004954 ORTHO05D006267 1.2e-211 740.3 616 59.3
Atru.chr5.2285 Acer truncatum HOM05D004954 ORTHO05D006267 2.0e-211 739.6 616 59.1
HPP92_017515 Vanilla planifolia HOM05D004954 ORTHO05D006267 4.4e-211 738.4 615 60.0
TPR.G29775 Trifolium pratense HOM05D004954 ORTHO05D006267 7.6e-211 737.6 621 59.1
Actinidia23789 Actinidia chinensis HOM05D004954 ORTHO05D006267 9.9e-211 737.3 654 57.2
EL10Ac5g10627 Beta vulgaris HOM05D004954 ORTHO05D006267 9.3e-209 730.7 610 58.9
CSS0003762 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 4.6e-208 728.4 617 59.6
DCAR_018627 Daucus carota HOM05D004954 ORTHO05D006267 6.0e-208 728.0 615 59.0
Ah.11g051040 Amaranthus hybridus HOM05D004954 ORTHO05D006267 7.8e-208 727.6 642 56.7
Hund09467 Selenicereus undatus HOM05D004954 ORTHO05D006267 1.0e-207 727.2 612 58.2
Haze_25215 Corylus avellana HOM05D004954 ORTHO05D006267 1.7e-207 726.5 682 55.6
Lj2g0006494 Lotus japonicus HOM05D004954 ORTHO05D006267 3.0e-207 725.7 615 58.0
Migut.D00727 Erythranthe guttata HOM05D004954 ORTHO05D006267 3.3e-206 722.2 615 58.9
Medtr1g038570 Medicago truncatula HOM05D004954 ORTHO05D006267 4.3e-206 721.8 621 58.0
CAN.G874.27 Capsicum annuum HOM05D004954 ORTHO05D006267 3.1e-204 715.7 616 57.8
Aa31sc420G20 Aethionema arabicum HOM05D004954 ORTHO05D006267 3.4e-203 712.2 575 61.6
vmacro21304 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 2.9e-202 709.1 750 50.8
CDE04G1241 Ceratophyllum demersum HOM05D004954 ORTHO05D006267 4.9e-202 708.4 615 59.5
Sopen06g034480 Solanum pennellii HOM05D004954 ORTHO05D006267 5.4e-201 704.9 617 57.2
SGA_v2.0_scaffold29G12103 Striga asiatica HOM05D004954 ORTHO05D006267 5.4e-201 704.9 575 60.2
Solyc06g083090.4 Solanum lycopersicum HOM05D004954 ORTHO05D006267 9.3e-201 704.1 617 57.1
unitig_37.g12142 Utricularia gibba HOM05D004954 ORTHO05D006267 2.1e-200 703.0 615 56.9
Os06g0186500 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 5.1e-199 698.4 616 56.5
Nitab4.5_0011983g0020 Nicotiana tabacum HOM05D004954 ORTHO05D006267 2.4e-196 689.5 615 56.6
TAR375G0531 Trochodendron aralioides HOM05D004954 ORTHO05D006267 2.4e-196 689.5 639 55.2
Peaxi162Scf01242g00120 Petunia axillaris HOM05D004954 ORTHO05D006267 5.3e-196 688.3 616 56.3
AUR62008123 Chenopodium quinoa HOM05D004954 ORTHO05D006267 2.0e-195 686.4 630 56.2
Nitab4.5_0002463g0060 Nicotiana tabacum HOM05D004954 ORTHO05D006267 8.4e-194 681.0 616 56.0
AUR62028702 Chenopodium quinoa HOM05D004954 ORTHO05D006267 3.2e-193 679.1 615 56.1
Manes.13G054100 Manihot esculenta HOM05D004954 ORTHO05D006267 3.5e-192 675.6 541 60.6
Sopen06g034490 Solanum pennellii HOM05D004954 ORTHO05D006267 8.1e-189 664.5 600 55.0
Solyc06g083100.2 Solanum lycopersicum HOM05D004954 ORTHO05D006267 3.4e-187 659.1 602 54.8
Psat6g025280 Pisum sativum HOM05D004954 ORTHO05D006267 4.5e-187 658.7 579 57.7
Cfa002884 Carpinus fangiana HOM05D004954 ORTHO05D006267 2.8e-181 639.4 517 59.8
Ca_12404_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 2.2e-178 629.8 621 52.8
FvH4_2g17860 Fragaria vesca HOM05D004954 ORTHO05D006267 2.5e-177 626.3 517 58.8
Sabra14G0144200 Salix brachista HOM05D004954 ORTHO05D006267 6.9e-172 608.2 511 59.5
Sc17g0001680 Simmondsia chinensis HOM05D004954 ORTHO05D006267 6.5e-162 575.1 469 59.7
Atru.chr12.963 Acer truncatum HOM05D004954 ORTHO05D006267 2.8e-157 559.7 444 61.3
Lsat_1_v5_gn_5_178381 Lactuca sativa HOM05D004954 ORTHO05D006267 3.8e-154 549.3 530 54.2
CBR_g32699 Chara braunii HOM05D004954 ORTHO05D006267 3.9e-151 539.3 510 53.9
SMO302G0009 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 6.7e-151 538.5 598 53.7
FAN15G2379 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.5e-145 520.8 558 49.3
Os07g0185700 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 9.8e-142 508.1 617 45.2
Zm00001eb301770 Zea mays HOM05D004954 ORTHO05D006267 7.0e-132 475.3 617 42.6
Cpa.g.sc8.76 Carica papaya HOM05D004954 ORTHO05D006267 1.2e-123 448.0 358 61.7
CARHR183510 Cardamine hirsuta HOM05D004954 ORTHO05D006267 7.8e-123 445.3 358 62.3
GSVIVG01006234001 Vitis vinifera HOM05D004954 ORTHO05D006267 7.0e-116 422.2 491 48.7
COL.COLO4_03294 Corchorus olitorius HOM05D004954 ORTHO05D006267 1.2e-115 421.4 339 62.2
Zm00001eb278340 Zea mays HOM05D004954 ORTHO05D006267 1.7e-114 417.5 364 57.4
arahy.Tifrunner.gnm1.ann1.R4R8P3 Arachis hypogaea HOM05D004954 ORTHO05D006267 6.2e-112 409.1 387 55.0
vmacro21300 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 1.4e-84 318.2 284 58.5
MD05G1161600 Malus domestica HOM05D004954 ORTHO05D006267 1.1e-71 275.4 455 38.7
SEGI_36119 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.2e-70 271.9 188 71.3
MD05G1162300 Malus domestica HOM05D004954 ORTHO05D006267 1.1e-68 265.4 375 40.3
GSVIVG01002254001 Vitis vinifera HOM05D004954 ORTHO05D006267 6.9e-55 219.5 175 61.1
COL.COLO4_03295 Corchorus olitorius HOM05D004954 ORTHO05D006267 2.0e-54 218.0 169 63.9
FAN15G2003 Fragaria x ananassa HOM05D004954 ORTHO05D006267 3.6e-43 180.6 144 63.2
Sc17g0001690 Simmondsia chinensis HOM05D004954 ORTHO05D006267 3.9e-42 177.2 138 64.5
SEGI_30399 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 5.1e-42 176.8 137 59.9
Cpa.g.sc8.77 Carica papaya HOM05D004954 ORTHO05D006267 1.5e-41 175.3 119 70.6
FAN15G2507 Fragaria x ananassa HOM05D004954 ORTHO05D006267 9.1e-39 166.0 134 58.2
Atru.chr12.964 Acer truncatum HOM05D004954 ORTHO05D006267 3.2e-36 157.5 151 55.0
MD05G1161700 Malus domestica HOM05D004954 ORTHO05D006267 9.4e-36 156.0 121 64.5
MBI18_g37244_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 1.6e-35 155.2 105 70.5
Sabra14G0144300 Salix brachista HOM05D004954 ORTHO05D006267 9.7e-33 146.0 110 61.8
VMungo0647G2582 Vigna mungo HOM05D004954 ORTHO05D006267 1.7e-32 145.2 105 68.6
CBR_g49514 Chara braunii HOM05D000019 ORTHO05D001702 2.6e-25 121.3 106 55.7
SEGI_32998 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 9.8e-25 119.4 86 70.9
Ca_12408_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 1.1e-23 115.9 178 39.9
Ca_12409_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 2.7e-19 101.3 71 70.4
VMungo0647G1109 Vigna mungo HOM05D004954 ORTHO05D006267 2.3e-18 98.2 100 50.0
VMungo0464G0043 Vigna mungo HOM05D004954 ORTHO05D006267 5.2e-18 97.1 59 71.2
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 5.2e-18 97.1 59 71.2
MD05G1160200 Malus domestica HOM05D004954 ORTHO05D006267 6.8e-18 96.7 87 54.0
MD05G1162200 Malus domestica HOM05D004954 ORTHO05D006267 2.0e-17 95.1 61 68.9
PGSC0003DMG400008807 Solanum tuberosum HOM05D004954 ORTHO05D006267 2.4e-15 88.2 59 64.4
PGSC0003DMG400020114 Solanum tuberosum HOM05D004954 ORTHO05D006267 2.4e-15 88.2 59 64.4
Cfa002883 Carpinus fangiana HOM05D020463 ORTHO05D022255 8.6e-13 79.7 54 68.5
SEGI_31941 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.0e-10 72.8 129 37.2
TAR375G0464 Trochodendron aralioides HOM05D004954 ORTHO05D006267 2.3e-10 71.6 44 75.0
Hma1.2p1_0066F.1_g035760 Hydrangea macrophylla HOM05D004954 ORTHO05D006267 4.0e-10 70.9 53 56.6
QL09p053445 Quercus lobata HOM05D004954 ORTHO05D030058 1.2e-09 69.3 115 42.6
Ciclev10018232m.g Citrus clementina HOM05D004954 ORTHO05D006267 7.5e-09 66.6 76 46.1
Glyma.09G284100 Glycine max HOM05D004954 ORTHO05D006267 3.2e-07 61.2 49 46.9
Medtr3g114845 Medicago truncatula HOM05D004954 ORTHO05D006267 9.2e-07 59.7 51 49.0


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