Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 4.1e-162 574.7 295 100.0
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 1.6e-41 174.1 292 38.4
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 1.4e-40 171.0 147 55.1
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 3.1e-37 159.8 214 43.5
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 1.5e-36 157.5 145 56.6
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 4.5e-28 129.4 231 39.4
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 2.9e-27 126.7 194 41.8
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 6.5e-27 125.6 220 38.6
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 6.5e-27 125.6 149 46.3
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 6.5e-27 125.6 142 47.2
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 1.1e-26 124.8 194 38.7
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 1.5e-26 124.4 196 41.8
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 1.9e-26 124.0 133 49.6
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 2.5e-26 123.6 129 50.4
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 2.5e-26 123.6 123 51.2
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 4.2e-26 122.9 221 38.0
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 4.2e-26 122.9 130 50.8
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 4.2e-26 122.9 222 36.5
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 5.5e-26 122.5 216 39.4
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 5.5e-26 122.5 199 40.2
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 5.5e-26 122.5 199 40.2
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 7.2e-26 122.1 195 40.5
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 9.4e-26 121.7 219 37.0
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 9.4e-26 121.7 219 37.0
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 9.4e-26 121.7 219 37.0
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 1.6e-25 120.9 123 50.4
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 2.7e-25 120.2 190 41.1
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 3.6e-25 119.8 221 38.0
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 3.6e-25 119.8 216 38.9
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 3.6e-25 119.8 178 41.6
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 3.6e-25 119.8 235 40.0
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 4.7e-25 119.4 124 50.0
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 6.1e-25 119.0 213 36.2
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 8.0e-25 118.6 128 49.2
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 8.0e-25 118.6 123 52.0
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.0e-24 118.2 186 38.2
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 1.0e-24 118.2 200 39.0
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 1.0e-24 118.2 197 38.1
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 1.4e-24 117.9 129 48.8
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 1.4e-24 117.9 191 39.3
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 1.8e-24 117.5 135 45.9
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 2.3e-24 117.1 221 37.6
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 3.0e-24 116.7 200 39.5
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 3.0e-24 116.7 172 40.7
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 3.9e-24 116.3 205 39.5
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 3.9e-24 116.3 123 49.6
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 3.9e-24 116.3 122 48.4
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 6.7e-24 115.5 123 48.0
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 8.8e-24 115.2 125 50.4
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 8.8e-24 115.2 209 37.8
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 8.8e-24 115.2 211 36.5
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 1.1e-23 114.8 159 41.5
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 1.1e-23 114.8 214 36.9
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 1.1e-23 114.8 133 46.6
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.5e-23 114.4 207 39.1
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 2.6e-23 113.6 208 38.9
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 2.6e-23 113.6 199 39.7
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 2.6e-23 113.6 132 47.7
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 2.6e-23 113.6 154 42.2
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 2.6e-23 113.6 206 38.3
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 4.4e-23 112.8 130 46.9
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 4.4e-23 112.8 212 36.3
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 5.7e-23 112.5 142 44.4
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 7.4e-23 112.1 227 35.2
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 9.7e-23 111.7 203 38.4
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 9.7e-23 111.7 200 36.0
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 9.7e-23 111.7 123 46.3
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 1.3e-22 111.3 207 38.2
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 1.7e-22 110.9 230 33.5
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 2.8e-22 110.2 239 38.5
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 2.8e-22 110.2 207 37.7
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 4.8e-22 109.4 183 37.2
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 8.2e-22 108.6 224 34.8
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 1.1e-21 108.2 118 46.6
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 1.4e-21 107.8 230 35.7
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 2.4e-21 107.1 248 32.3
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 3.1e-21 106.7 123 46.3
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 7.0e-21 105.5 126 43.7
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 1.2e-20 104.8 210 36.2
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 2.0e-20 104.0 147 41.5
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 3.5e-20 103.2 230 31.3
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 4.5e-20 102.8 234 35.0
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 4.5e-20 102.8 236 32.6
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 4.5e-20 102.8 242 33.1
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 4.5e-20 102.8 197 35.5
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 7.7e-20 102.1 113 46.9
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 7.7e-20 102.1 111 45.9
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 1.0e-19 101.7 230 30.9
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 2.2e-19 100.5 204 35.3
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 2.9e-19 100.1 231 30.3
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 3.8e-19 99.8 256 34.4
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 5.0e-19 99.4 230 30.4
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 5.0e-19 99.4 231 30.7
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 8.5e-19 98.6 243 32.5
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 1.1e-18 98.2 261 31.8
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 4.2e-18 96.3 251 31.1
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 4.2e-18 96.3 206 35.0
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 5.5e-18 95.9 135 41.5
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 3.6e-17 93.2 249 32.9
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 8.0e-17 92.0 230 32.6
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 8.0e-17 92.0 183 37.2
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 2.3e-16 90.5 221 30.3
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 1.7e-14 84.3 93 49.5
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 1.6e-12 77.8 199 31.2
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 2.0e-12 77.4 121 38.0
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 4.5e-12 76.3 123 39.0
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 5.9e-12 75.9 174 30.5
MCO07G107 Micromonas commoda HOM05D006369 ORTHO05D007764 2.0e-07 60.8 96 37.5
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 4.4e-07 59.7 67 47.8
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 3.7e-06 56.6 45 55.6
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 6.3e-06 55.8 74 43.2


User provided reference genes

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