Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 3.0e-75 285.0 140 100.0
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 6.4e-49 197.6 138 65.2
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 2.4e-48 195.7 137 67.9
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 3.2e-48 195.3 139 65.5
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 6.0e-47 191.0 138 63.8
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 7.8e-47 190.7 138 65.9
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 1.3e-46 189.9 138 65.9
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 1.7e-46 189.5 138 65.2
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 1.7e-46 189.5 137 64.2
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 2.3e-46 189.1 138 65.2
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 3.9e-46 188.3 138 63.8
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 3.9e-46 188.3 138 63.8
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 5.1e-46 188.0 138 62.3
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 5.1e-46 188.0 138 64.5
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 8.6e-46 187.2 138 63.8
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 8.6e-46 187.2 137 65.7
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 1.1e-45 186.8 138 62.3
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 1.5e-45 186.4 138 62.3
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 1.9e-45 186.0 138 61.6
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 2.5e-45 185.7 137 63.5
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 4.3e-45 184.9 138 63.0
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 4.3e-45 184.9 137 63.5
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 5.6e-45 184.5 138 60.9
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 5.6e-45 184.5 137 62.8
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 5.6e-45 184.5 137 61.3
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 5.6e-45 184.5 137 63.5
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 7.3e-45 184.1 138 60.9
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 7.3e-45 184.1 138 62.3
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 7.3e-45 184.1 138 62.3
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 9.6e-45 183.7 138 63.8
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 9.6e-45 183.7 138 60.9
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 9.6e-45 183.7 138 63.0
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 9.6e-45 183.7 138 63.0
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 9.6e-45 183.7 138 62.3
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.2e-44 183.3 138 61.6
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 1.2e-44 183.3 137 63.5
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 1.6e-44 183.0 138 63.0
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.6e-44 183.0 138 60.9
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.6e-44 183.0 138 63.0
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 1.6e-44 183.0 137 63.5
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 2.8e-44 182.2 138 61.6
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 2.8e-44 182.2 138 61.6
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 2.8e-44 182.2 138 59.4
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 2.8e-44 182.2 138 60.9
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 3.6e-44 181.8 138 59.4
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 3.6e-44 181.8 137 63.5
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 4.7e-44 181.4 138 63.0
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 4.7e-44 181.4 138 59.4
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 4.7e-44 181.4 137 61.3
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 8.1e-44 180.6 137 63.5
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 8.1e-44 180.6 139 62.6
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 8.1e-44 180.6 139 62.6
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 8.1e-44 180.6 138 59.4
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 1.1e-43 180.3 137 61.3
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 1.1e-43 180.3 138 60.9
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 1.1e-43 180.3 137 62.0
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 1.4e-43 179.9 138 58.7
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 3.1e-43 178.7 137 62.0
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 4.0e-43 178.3 138 61.6
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 4.0e-43 178.3 138 60.1
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 5.2e-43 177.9 138 62.3
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 6.9e-43 177.6 137 61.3
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 8.9e-43 177.2 133 63.2
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 8.9e-43 177.2 140 60.0
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 8.9e-43 177.2 139 59.7
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 1.2e-42 176.8 137 62.0
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.5e-42 176.4 138 61.6
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 1.5e-42 176.4 138 60.1
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 2.0e-42 176.0 138 60.9
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 2.0e-42 176.0 138 60.1
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 3.4e-42 175.3 137 60.6
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 5.8e-42 174.5 139 58.3
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 5.8e-42 174.5 140 57.1
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 5.8e-42 174.5 138 58.0
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 7.6e-42 174.1 137 60.6
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 9.9e-42 173.7 163 54.0
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 1.3e-41 173.3 137 60.6
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 1.7e-41 172.9 137 59.1
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 1.7e-41 172.9 137 59.1
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 1.7e-41 172.9 137 59.1
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.7e-41 172.9 149 57.7
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 2.2e-41 172.6 137 59.9
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 2.9e-41 172.2 137 59.1
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 2.9e-41 172.2 140 57.9
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 1.1e-40 170.2 139 56.8
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 1.4e-40 169.9 147 56.5
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 2.4e-40 169.1 138 58.7
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 4.2e-40 168.3 147 56.5
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 5.4e-40 167.9 130 61.5
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 6.0e-39 164.5 148 54.7
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 3.0e-38 162.2 143 57.3
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 8.7e-38 160.6 138 56.5
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 9.9e-34 147.1 147 52.4
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 1.7e-33 146.4 140 55.0
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 3.8e-33 145.2 116 61.2
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 3.9e-30 135.2 210 39.5
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.5e-29 133.3 143 49.7
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 1.6e-28 129.8 106 60.4
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 3.1e-27 125.6 106 58.5
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 4.0e-27 125.2 106 57.5
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 4.0e-27 125.2 111 53.2
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 2.6e-26 122.5 106 57.5
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 3.4e-26 122.1 137 48.9
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 1.7e-25 119.8 106 54.7
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 1.7e-25 119.8 119 50.4
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 2.2e-25 119.4 106 56.6
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 3.8e-25 118.6 142 45.8
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 2.4e-24 115.9 106 52.8
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 1.1e-21 107.1 141 44.0
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 2.5e-21 105.9 70 71.4
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 1.5e-18 96.7 144 38.2
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 5.1e-14 81.6 80 50.0
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 8.7e-14 80.9 136 36.0
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 4.1e-11 72.0 56 64.3


User provided reference genes

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