Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_5240 Physcomitrium patens HOM05D009263 ORTHO05D011372 0.0e+00 1144.4 606 100.0
Pp3c17_14540 Physcomitrium patens HOM05D009263 ORTHO05D317039 1.2e-72 278.5 438 38.6
Pp3c22_5320 Physcomitrium patens HOM05D009263 ORTHO05D319260 5.8e-54 216.5 547 32.5
Pp3c2_5170 Physcomitrium patens HOM05D009263 ORTHO05D312357 2.0e-46 191.4 557 30.7
Pp3c1_25930 Physcomitrium patens HOM05D009263 ORTHO05D011372 3.8e-37 160.6 565 27.3
AagrBONN_evm.TU.Sc2ySwM_368.327 Anthoceros agrestis HOM05D009263 ORTHO05D011372 6.0e-35 153.3 556 25.7
Pp3c7_19620 Physcomitrium patens HOM05D009263 ORTHO05D011372 7.8e-35 152.9 590 25.9
Pp3c7_20720 Physcomitrium patens HOM05D009263 ORTHO05D011372 7.8e-35 152.9 573 27.4
Pp3c10_3200 Physcomitrium patens HOM05D009263 ORTHO05D011372 2.8e-32 144.4 573 26.9
AagrBONN_evm.TU.Sc2ySwM_368.346 Anthoceros agrestis HOM05D009263 ORTHO05D011372 6.9e-31 139.8 548 27.9
AagrBONN_evm.TU.Sc2ySwM_368.331 Anthoceros agrestis HOM05D009263 ORTHO05D011372 4.9e-29 133.7 375 29.1
AagrBONN_evm.TU.Sc2ySwM_368.328 Anthoceros agrestis HOM05D009263 ORTHO05D011372 2.1e-27 128.3 406 29.8
AagrBONN_evm.TU.Sc2ySwM_368.326 Anthoceros agrestis HOM05D009263 ORTHO05D011372 1.3e-26 125.6 453 27.2
Mapoly0156s0005 Marchantia polymorpha HOM05D009263 ORTHO05D011372 5.6e-25 120.2 606 25.2
Pp3c2_7620 Physcomitrium patens HOM05D009263 ORTHO05D030457 2.4e-23 114.8 608 24.7
Pp3c15_19160 Physcomitrium patens HOM05D009263 ORTHO05D030457 2.0e-22 111.7 552 25.7
Mapoly0123s0042 Marchantia polymorpha HOM05D009263 ORTHO05D022912 5.4e-20 103.6 367 25.3
Pp3c1_26960 Physcomitrium patens HOM05D000054 ORTHO05D000286 5.4e-20 103.6 570 24.2
SMO367G0281 Selaginella moellendorffii HOM05D011783 ORTHO05D011372 7.1e-20 103.2 587 23.0
Mapoly0110s0042 Marchantia polymorpha HOM05D023156 ORTHO05D011372 1.2e-19 102.4 586 25.9
AagrBONN_evm.TU.Sc2ySwM_368.870 Anthoceros agrestis HOM05D009263 ORTHO05D011372 7.9e-19 99.8 393 28.0
Mapoly0200s0010 Marchantia polymorpha HOM05D023156 ORTHO05D011372 7.9e-19 99.8 403 29.5
SMO367G0618 Selaginella moellendorffii HOM05D011783 ORTHO05D011372 3.9e-18 97.4 435 23.4
Pp3c1_28510 Physcomitrium patens HOM05D009263 ORTHO05D030457 1.9e-17 95.1 244 31.1
Pp3c27_4590 Physcomitrium patens HOM05D000054 ORTHO05D000286 2.0e-14 85.1 580 24.3
SMO367G0156 Selaginella moellendorffii HOM05D011783 ORTHO05D011372 7.6e-14 83.2 537 21.0
Pp3c9_4100 Physcomitrium patens HOM05D009263 ORTHO05D030457 6.4e-13 80.1 460 23.3
Pp3c6_25020 Physcomitrium patens HOM05D000054 ORTHO05D000286 3.2e-12 77.8 129 38.0
CBR_g34189 Chara braunii HOM05D009263 ORTHO05D011372 9.3e-12 76.3 615 20.7
AagrBONN_evm.TU.Sc2ySwM_368.875 Anthoceros agrestis HOM05D009263 ORTHO05D011372 2.7e-11 74.7 176 32.4
Mapoly0009s0220 Marchantia polymorpha HOM05D009263 ORTHO05D022912 1.8e-10 72.0 476 23.1
SMO367G0778 Selaginella moellendorffii HOM05D011783 ORTHO05D011372 1.1e-09 69.3 477 22.6
AagrBONN_evm.TU.Sc2ySwM_368.869 Anthoceros agrestis HOM05D009263 ORTHO05D011372 6.2e-08 63.5 377 24.4
CBR_g5640 Chara braunii HOM05D003330 ORTHO05D003805 1.5e-06 58.9 145 26.2


User provided reference genes

Program Settings