Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_5220 Physcomitrium patens HOM05D061373 ORTHO05D315005 1.7e-67 259.2 130 100.0
Pp3c22_3080 Physcomitrium patens HOM05D007104 ORTHO05D008851 3.9e-16 88.6 91 51.6
Pp3c23_3415 Physcomitrium patens HOM05D061373 ORTHO05D308960 2.9e-11 72.4 64 57.8
Pp3c12_16500 Physcomitrium patens HOM05D000039 ORTHO05D000815 4.9e-11 71.6 92 42.4
Peaxi162Scf00781g00051 Petunia axillaris HOM05D000039 ORTHO05D000366 1.7e-08 63.2 136 32.4
SEGI_01678 Sequoiadendron giganteum HOM05D000039 ORTHO05D000366 1.7e-08 63.2 89 37.1
SalBow8G3688 Salvia bowleyana HOM05D000044 ORTHO05D005263 5.1e-08 61.6 92 40.2
Nitab4.5_0004428g0020 Nicotiana tabacum HOM05D000039 ORTHO05D000366 3.3e-07 58.9 136 30.9
arahy.Tifrunner.gnm1.ann1.GXYI41 Arachis hypogaea HOM05D000039 ORTHO05D000870 4.3e-07 58.5 91 35.2
Oeu062326.4 Olea europaea HOM05D000039 ORTHO05D008976 4.3e-07 58.5 121 35.5
Nitab4.5_0000900g0090 Nicotiana tabacum HOM05D000039 ORTHO05D000366 5.6e-07 58.2 132 31.1
Oeu062325.1 Olea europaea HOM05D000039 ORTHO05D008976 5.6e-07 58.2 121 34.7
SEGI_11935 Sequoiadendron giganteum HOM05D000039 ORTHO05D000366 7.3e-07 57.8 91 35.2
SEGI_27431 Sequoiadendron giganteum HOM05D000039 ORTHO05D000366 7.3e-07 57.8 91 35.2
A02p02360 Brassica napus HOM05D000039 ORTHO05D000870 9.6e-07 57.4 121 31.4
BraA02t05206Z Brassica rapa HOM05D000039 ORTHO05D000870 9.6e-07 57.4 121 31.4
SMO367G1237 Selaginella moellendorffii HOM05D000039 ORTHO05D000815 9.6e-07 57.4 120 30.0
arahy.Tifrunner.gnm1.ann1.EKB7S2 Arachis hypogaea HOM05D000039 ORTHO05D000870 1.3e-06 57.0 91 34.1
BcaC03g13517 Brassica carinata HOM05D000039 ORTHO05D000870 1.3e-06 57.0 121 31.4
C08p51820 Brassica napus HOM05D000039 ORTHO05D000366 1.3e-06 57.0 122 32.0
BolC8t52714H Brassica oleracea HOM05D000039 ORTHO05D000366 1.3e-06 57.0 122 32.0
BcaC04g19056 Brassica carinata HOM05D000039 ORTHO05D000870 1.6e-06 56.6 121 32.2
arahy.Tifrunner.gnm1.ann1.GT8KW4 Arachis hypogaea HOM05D000044 ORTHO05D000051 2.1e-06 56.2 120 35.0
C08p51860 Brassica napus HOM05D000039 ORTHO05D000366 2.1e-06 56.2 91 34.1
BolC8t52718H Brassica oleracea HOM05D000039 ORTHO05D000366 2.1e-06 56.2 91 34.1
SEGI_14399 Sequoiadendron giganteum HOM05D000039 ORTHO05D000366 2.8e-06 55.8 91 34.1
BcaNung06022 Brassica carinata HOM05D000039 ORTHO05D000870 3.6e-06 55.5 121 31.4
Gohir.A08G229000 Gossypium hirsutum HOM05D000044 ORTHO05D000051 3.6e-06 55.5 123 30.1
Solyc12g005370.2 Solanum lycopersicum HOM05D000039 ORTHO05D000366 3.6e-06 55.5 137 29.2
A09p67530 Brassica napus HOM05D000039 ORTHO05D000366 4.8e-06 55.1 91 34.1
C02p06580 Brassica napus HOM05D000039 ORTHO05D000870 4.8e-06 55.1 120 30.8
BolC2t06604H Brassica oleracea HOM05D000039 ORTHO05D000870 4.8e-06 55.1 120 30.8
BraA09t42084Z Brassica rapa HOM05D000039 ORTHO05D000366 4.8e-06 55.1 91 34.1
Pp3c17_6050 Physcomitrium patens HOM05D000044 ORTHO05D000051 4.8e-06 55.1 139 33.8
Ah.02g116020 Amaranthus hybridus HOM05D000039 ORTHO05D000370 6.2e-06 54.7 134 28.4
arahy.Tifrunner.gnm1.ann1.Q1EQ94 Arachis hypogaea HOM05D000044 ORTHO05D000051 6.2e-06 54.7 120 35.0
Manes.12G076200 Manihot esculenta HOM05D000039 ORTHO05D000366 6.2e-06 54.7 121 31.4
Sopen12g001340 Solanum pennellii HOM05D000039 ORTHO05D000366 6.2e-06 54.7 137 28.5
HPP92_023139 Vanilla planifolia HOM05D000044 ORTHO05D000051 6.2e-06 54.7 132 30.3
A10p24290 Brassica napus HOM05D000039 ORTHO05D000870 8.1e-06 54.3 121 31.4
BraA10t44494Z Brassica rapa HOM05D000039 ORTHO05D000870 8.1e-06 54.3 121 31.4
CiPaw.10G067900 Carya illinoinensis HOM05D000039 ORTHO05D000366 8.1e-06 54.3 92 28.3
COL.COLO4_10436 Corchorus olitorius HOM05D000044 ORTHO05D000051 8.1e-06 54.3 122 28.7
Nn3g21136 Nelumbo nucifera HOM05D000044 ORTHO05D000051 8.1e-06 54.3 120 35.0
PSO339G5423 Papaver somniferum HOM05D000044 ORTHO05D000051 8.1e-06 54.3 126 33.3
PSO384G3181 Papaver somniferum HOM05D000044 ORTHO05D000051 8.1e-06 54.3 126 33.3
SEGI_22685 Sequoiadendron giganteum HOM05D000039 ORTHO05D000366 8.1e-06 54.3 91 35.2
TPR.G15814 Trifolium pratense HOM05D000044 ORTHO05D000051 8.1e-06 54.3 130 27.7


User provided reference genes

Program Settings