Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_4980 Physcomitrium patens HOM05D024288 ORTHO05D002809 2.1e-169 599.0 311 100.0
Mapoly0015s0203 Marchantia polymorpha HOM05D024288 ORTHO05D002809 3.3e-61 239.6 328 47.3
AagrBONN_evm.TU.Sc2ySwM_117.3658 Anthoceros agrestis HOM05D024288 ORTHO05D002809 1.4e-48 197.6 315 42.9
SMO367G0523 Selaginella moellendorffii HOM05D000638 ORTHO05D002809 1.2e-34 151.4 305 35.1
CBR_g45942 Chara braunii HOM05D024288 ORTHO05D002809 2.4e-19 100.5 151 35.1
Mapoly0042s0124 Marchantia polymorpha HOM05D002766 ORTHO05D002809 3.0e-14 83.6 316 29.1
SMO367G1113 Selaginella moellendorffii HOM05D002766 ORTHO05D002809 1.9e-13 80.9 329 28.3
SEGI_39337 Sequoiadendron giganteum HOM05D002766 ORTHO05D002809 2.5e-13 80.5 267 27.3
SEGI_16254 Sequoiadendron giganteum HOM05D002766 ORTHO05D002809 1.6e-12 77.8 321 26.2
Pp3c15_19720 Physcomitrium patens HOM05D002766 ORTHO05D002809 2.9e-09 67.0 329 25.8
CiPaw.14G023800 Carya illinoinensis HOM05D002766 ORTHO05D002809 6.5e-09 65.9 148 31.1
SEGI_27148 Sequoiadendron giganteum HOM05D002766 ORTHO05D002809 6.5e-09 65.9 148 29.1
Oeu017784.1 Olea europaea HOM05D002766 ORTHO05D002809 1.1e-08 65.1 289 25.6
MSTRG.133 Avicennia marina HOM05D002766 ORTHO05D002809 1.4e-08 64.7 234 27.4
Dinv06576 Davidia involucrata HOM05D002766 ORTHO05D002809 1.4e-08 64.7 233 26.6
AagrBONN_evm.TU.Sc2ySwM_340.385 Anthoceros agrestis HOM05D024288 ORTHO05D002809 1.9e-08 64.3 180 26.7
Potri.001G126300 Populus trichocarpa HOM05D002766 ORTHO05D002809 1.9e-08 64.3 268 27.6
Ca_12620_v3 Cicer arietinum L. HOM05D002766 ORTHO05D002809 3.2e-08 63.5 149 32.2
QL02p025713 Quercus lobata HOM05D002766 ORTHO05D002809 4.2e-08 63.2 148 29.1
TWI23G0718 Tripterygium wilfordii HOM05D002766 ORTHO05D002809 4.2e-08 63.2 161 31.1
TWI39G0974 Tripterygium wilfordii HOM05D002766 ORTHO05D002809 4.2e-08 63.2 163 28.8
Pp3c2_1090 Physcomitrium patens HOM05D002766 ORTHO05D002809 5.5e-08 62.8 148 29.7
Manes.06G133000 Manihot esculenta HOM05D002766 ORTHO05D002809 1.6e-07 61.2 164 28.0
Psat3g167080 Pisum sativum HOM05D002766 ORTHO05D002809 2.7e-07 60.5 151 31.8
Sabra01G0097400 Salix brachista HOM05D002766 ORTHO05D002809 2.7e-07 60.5 265 27.2
ClCG01G001130 Citrullus lanatus HOM05D002766 ORTHO05D002809 3.5e-07 60.1 143 30.1
SalBow2G0493 Salvia bowleyana HOM05D002766 ORTHO05D002809 4.6e-07 59.7 154 30.5
TAR627G0073 Trochodendron aralioides HOM05D003841 ORTHO05D004602 4.6e-07 59.7 285 25.3
DCAR_018118 Daucus carota HOM05D002766 ORTHO05D002809 6.0e-07 59.3 269 24.9
Sabra03G0074200 Salix brachista HOM05D002766 ORTHO05D002809 6.0e-07 59.3 280 26.8
CAN.G48.48 Capsicum annuum HOM05D002766 ORTHO05D002809 1.0e-06 58.5 158 26.6
Duzib084G0704 Durio zibethinus HOM05D002766 ORTHO05D002809 1.0e-06 58.5 295 25.1
MBI04_g09526_MAGBIO Magnolia biondii HOM05D002766 ORTHO05D002809 1.0e-06 58.5 322 26.7
Hma1.2p1_0432F.1_g151920 Hydrangea macrophylla HOM05D002766 ORTHO05D002809 1.3e-06 58.2 237 25.7
Nitab4.5_0001267g0160 Nicotiana tabacum HOM05D002766 ORTHO05D002809 1.3e-06 58.2 148 27.0
Pp3c9_19620 Physcomitrium patens HOM05D002766 ORTHO05D002809 1.3e-06 58.2 331 23.9
vmacro09914 Vaccinium macrocarpon HOM05D002766 ORTHO05D002809 1.3e-06 58.2 209 27.8
Actinidia01048 Actinidia chinensis HOM05D002766 ORTHO05D002809 1.8e-06 57.8 258 27.5
Ciclev10005283m.g Citrus clementina HOM05D002766 ORTHO05D002809 1.8e-06 57.8 271 25.5
Cc02_g04440 Coffea canephora HOM05D002766 ORTHO05D002809 1.8e-06 57.8 306 28.1
Gohir.A11G039800 Gossypium hirsutum HOM05D002766 ORTHO05D002809 1.8e-06 57.8 269 25.7
Gorai.007G046400 Gossypium raimondii HOM05D002766 ORTHO05D002809 1.8e-06 57.8 272 26.5
Lj3g0010292 Lotus japonicus HOM05D003841 ORTHO05D004602 1.8e-06 57.8 262 24.8
Lalb_Chr01g0000251 Lupinus albus HOM05D002766 ORTHO05D002809 1.8e-06 57.8 235 27.2
QL04p035311 Quercus lobata HOM05D002766 ORTHO05D002809 1.8e-06 57.8 151 27.2
Sopen03g024140 Solanum pennellii HOM05D002766 ORTHO05D002809 3.0e-06 57.0 232 25.0
Atru.chr1.819 Acer truncatum HOM05D002766 ORTHO05D002809 3.9e-06 56.6 158 27.8
ECA238G1863 Erigeron canadensis HOM05D002766 ORTHO05D002809 3.9e-06 56.6 153 30.1
Potri.003G107400 Populus trichocarpa HOM05D002766 ORTHO05D002809 3.9e-06 56.6 151 31.1
Potri.014G057200 Populus trichocarpa HOM05D002766 ORTHO05D002809 3.9e-06 56.6 134 26.9
Gohir.D11G043100 Gossypium hirsutum HOM05D002766 ORTHO05D002809 5.1e-06 56.2 272 26.1
Peaxi162Scf00271g00833 Petunia axillaris HOM05D002766 ORTHO05D002809 5.1e-06 56.2 296 26.0
Rhsim09G0190500 Rhododendron simsii HOM05D002766 ORTHO05D002809 5.1e-06 56.2 236 27.5
PGSC0003DMG400018857 Solanum tuberosum HOM05D002766 ORTHO05D002809 5.1e-06 56.2 254 24.0
Rhsim03G0165400 Rhododendron simsii HOM05D002766 ORTHO05D002809 6.7e-06 55.8 233 27.0
Pp3c17_23830 Physcomitrium patens HOM05D039964 ORTHO05D002809 8.7e-06 55.5 347 26.5
TAR271G0005 Trochodendron aralioides HOM05D003841 ORTHO05D004602 8.7e-06 55.5 342 24.6
TAR271G0006 Trochodendron aralioides HOM05D003841 ORTHO05D004602 8.7e-06 55.5 342 24.6


User provided reference genes

Program Settings