Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 2.1e-126 455.7 223 100.0
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 4.1e-58 228.8 222 52.3
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 2.4e-50 203.0 165 56.4
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 5.4e-50 201.8 167 54.5
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 1.2e-49 200.7 209 47.8
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 3.5e-49 199.1 167 54.5
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 7.8e-49 198.0 176 52.8
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.7e-48 196.8 169 55.0
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 2.3e-48 196.4 166 53.6
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 3.0e-48 196.1 167 53.3
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 3.9e-48 195.7 169 55.0
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 3.9e-48 195.7 165 55.2
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 6.6e-48 194.9 165 53.3
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 6.6e-48 194.9 165 53.3
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 8.6e-48 194.5 169 52.1
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 1.1e-47 194.1 165 53.3
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 1.1e-47 194.1 165 53.3
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 1.1e-47 194.1 167 50.9
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 1.5e-47 193.7 212 46.2
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 1.9e-47 193.4 172 53.5
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 1.9e-47 193.4 167 50.9
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 1.9e-47 193.4 169 53.8
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 4.3e-47 192.2 161 53.4
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 4.3e-47 192.2 165 53.3
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 4.3e-47 192.2 166 54.8
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 7.3e-47 191.4 165 54.5
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 9.5e-47 191.0 163 52.8
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 9.5e-47 191.0 165 54.5
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 1.2e-46 190.7 167 52.1
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 1.2e-46 190.7 165 52.7
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 1.2e-46 190.7 167 53.3
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 1.6e-46 190.3 167 52.1
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 1.6e-46 190.3 166 53.6
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 1.6e-46 190.3 168 51.8
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 1.6e-46 190.3 163 52.1
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 1.6e-46 190.3 162 53.1
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 1.6e-46 190.3 165 52.7
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 1.6e-46 190.3 167 51.5
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 2.8e-46 189.5 161 53.4
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 2.8e-46 189.5 161 53.4
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 2.8e-46 189.5 176 49.4
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 3.6e-46 189.1 163 52.1
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 3.6e-46 189.1 165 52.1
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 4.7e-46 188.7 167 53.3
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 4.7e-46 188.7 162 51.9
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 4.7e-46 188.7 162 53.7
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 6.2e-46 188.3 164 52.4
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 6.2e-46 188.3 164 52.4
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 6.2e-46 188.3 164 52.4
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 6.2e-46 188.3 164 52.4
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 6.2e-46 188.3 164 52.4
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 8.1e-46 188.0 163 50.9
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 8.1e-46 188.0 165 52.1
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 8.1e-46 188.0 165 51.5
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 8.1e-46 188.0 162 51.2
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 1.1e-45 187.6 167 50.3
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 1.8e-45 186.8 169 53.8
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 3.1e-45 186.0 167 50.3
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 3.1e-45 186.0 162 52.5
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 4.0e-45 185.7 161 52.2
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 6.8e-45 184.9 167 49.1
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 6.8e-45 184.9 169 53.3
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 8.9e-45 184.5 167 49.7
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 1.2e-44 184.1 165 52.1
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 1.5e-44 183.7 161 50.9
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 2.0e-44 183.3 166 51.8
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 2.0e-44 183.3 167 50.3
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 2.6e-44 183.0 165 49.7
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 3.4e-44 182.6 161 51.6
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 3.4e-44 182.6 162 53.7
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 4.4e-44 182.2 167 50.3
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 5.8e-44 181.8 148 57.4
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 5.8e-44 181.8 180 46.1
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 5.8e-44 181.8 167 49.1
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 7.6e-44 181.4 161 50.3
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 7.6e-44 181.4 174 50.0
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 7.6e-44 181.4 167 50.9
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 9.9e-44 181.0 165 50.9
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 9.9e-44 181.0 168 49.4
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 9.9e-44 181.0 165 49.7
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 1.3e-43 180.6 167 49.7
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 7.1e-42 174.9 161 50.3
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 1.6e-41 173.7 165 52.7
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 3.5e-41 172.6 189 45.0
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 1.0e-40 171.0 182 46.2
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 8.6e-40 167.9 198 42.4
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 1.9e-39 166.8 143 53.8
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 5.6e-39 165.2 136 55.9
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 9.6e-39 164.5 135 57.8
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 1.6e-38 163.7 144 52.8
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 1.4e-37 160.6 167 47.3
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 8.9e-37 157.9 130 54.6
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 9.9e-36 154.5 121 59.5
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 1.7e-35 153.7 140 51.4
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 2.2e-35 153.3 176 44.9
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 6.4e-35 151.8 166 47.0
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 1.1e-34 151.0 127 55.1
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 7.1e-34 148.3 178 45.5
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 1.6e-33 147.1 166 50.6
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 9.6e-31 137.9 217 37.3
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 1.3e-30 137.5 165 41.8
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 7.6e-28 128.3 165 39.4
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 9.9e-28 127.9 127 50.4
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 9.3e-26 121.3 159 41.5
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 9.3e-26 121.3 184 37.5
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 9.3e-26 121.3 124 44.4
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 9.3e-26 121.3 117 50.4
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 5.6e-23 112.1 90 56.7
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 9.6e-23 111.3 163 36.2
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 1.3e-22 110.9 88 59.1
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 2.1e-22 110.2 122 44.3
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 2.4e-21 106.7 104 49.0
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 6.9e-21 105.1 83 55.4
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 9.0e-21 104.8 169 34.9
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 3.4e-20 102.8 93 53.8
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 3.0e-16 89.7 86 45.3
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 3.9e-16 89.4 101 44.6
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 3.9e-16 89.4 94 46.8
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 4.3e-15 85.9 70 57.1
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 1.4e-13 80.9 59 61.0
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 1.1e-10 71.2 98 40.8
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 1.3e-08 64.3 68 50.0
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 1.3e-08 64.3 111 33.3
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 1.5e-07 60.8 40 62.5
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 2.5e-07 60.1 54 51.9


User provided reference genes

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