Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_3410 Physcomitrium patens HOM05D000002 ORTHO05D313888 5.9e-42 173.7 84 100.0
Pp3c5_27270 Physcomitrium patens HOM05D000006 ORTHO05D000001 2.1e-15 85.5 92 48.9
Pp3c16_19670 Physcomitrium patens HOM05D000006 ORTHO05D318266 4.7e-15 84.3 97 47.4
Pp3c15_8400 Physcomitrium patens HOM05D000002 ORTHO05D000001 5.8e-13 77.4 95 44.2
Pp3c7_3400 Physcomitrium patens HOM05D000002 ORTHO05D316655 1.2e-10 69.7 45 75.6
Pp3c6_18150 Physcomitrium patens HOM05D000002 ORTHO05D000001 3.0e-09 65.1 97 37.1
Hma1.2p1_0061F.1_g033800 Hydrangea macrophylla HOM05D000006 ORTHO05D000001 5.1e-09 64.3 81 39.5
Pp3c27_2220 Physcomitrium patens HOM05D000002 ORTHO05D317565 6.6e-09 63.9 92 38.0
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 89 34.8
CSS0044424 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 4.3e-08 61.2 89 34.8
CSS0046608 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 4.3e-08 61.2 89 34.8
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-08 60.8 89 34.8
CSS0040971 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-08 60.8 89 34.8
CSS0049823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-08 60.8 89 33.7
SHI27159 Sapria himalayana HOM05D000002 ORTHO05D000001 9.6e-08 60.1 91 35.2
Sopen12g019350 Solanum pennellii HOM05D000006 ORTHO05D000001 1.6e-07 59.3 86 31.4
HanXRQChr02g0049901 Helianthus annuus HOM05D000002 ORTHO05D000001 2.1e-07 58.9 97 32.0
SEGI_02354 Sequoiadendron giganteum HOM05D000526 ORTHO05D002053 2.1e-07 58.9 94 35.1
TPR.G7066 Trifolium pratense HOM05D000002 ORTHO05D000001 2.1e-07 58.9 92 34.8
CSS0012289 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-07 58.5 89 33.7
Duzib041G0431 Durio zibethinus HOM05D000002 ORTHO05D000001 2.8e-07 58.5 86 34.9
ECA246G2006 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-07 58.5 86 34.9
TPR.G1944 Trifolium pratense HOM05D000002 ORTHO05D000001 2.8e-07 58.5 92 34.8
Manes.13G070650 Manihot esculenta HOM05D000002 ORTHO05D000001 3.6e-07 58.2 91 33.0
Sopen07g019560 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-07 58.2 94 34.0
TWI18G1116 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 3.6e-07 58.2 96 30.2
CSS0012172 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 4.7e-07 57.8 96 30.2
CSS0017137 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 4.7e-07 57.8 96 30.2
CSS0037222 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-07 57.8 89 32.6
Hma1.2p1_0370F.1_g137900 Hydrangea macrophylla HOM05D000006 ORTHO05D000001 4.7e-07 57.8 81 38.3
SHI35072 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-07 57.8 88 37.5
CSS0002087 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 6.2e-07 57.4 96 30.2
CSS0005849 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 6.2e-07 57.4 96 30.2
CSS0017304 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 6.2e-07 57.4 96 30.2
CSS0020166 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 6.2e-07 57.4 96 30.2
CSS0042679 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 6.2e-07 57.4 96 30.2
ECA238G0426 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-07 57.4 86 34.9
SHI06261 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-07 57.4 91 34.1
SHI12350 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-07 57.4 91 34.1
SEGI_18239 Sequoiadendron giganteum HOM05D018187 ORTHO05D013716 6.2e-07 57.4 94 31.9
CSS0032052 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.1e-07 57.0 89 31.5
ECA248G3034 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-07 57.0 86 33.7
MD01G1129400 Malus domestica HOM05D000002 ORTHO05D000001 8.1e-07 57.0 86 33.7
Rhsim02G0113200 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.1e-07 57.0 91 31.9
Rhsim03G0172600 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.1e-07 57.0 91 31.9
Rhsim09G0033700 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.1e-07 57.0 91 31.9
SHI07801 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-07 57.0 91 33.0
MD00G1037700 Malus domestica HOM05D000002 ORTHO05D000001 1.1e-06 56.6 86 32.6
MD08G1027200 Malus domestica HOM05D000002 ORTHO05D000001 1.1e-06 56.6 86 32.6
ECA232G2478 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 56.2 86 33.7
ECA233G1505 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 56.2 86 33.7
ECA233G2364 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 56.2 86 33.7
ECA233G3173 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 56.2 86 33.7
ECA238G1515 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 56.2 86 33.7
SHI47831 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 56.2 88 34.1
SHI48104 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 56.2 88 34.1
SEGI_05802 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 1.4e-06 56.2 94 34.0
Sopen03g025100 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 56.2 83 34.9
Sopen04g014220 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 56.2 79 39.2
CSS0031144 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 1.8e-06 55.8 91 34.1
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-06 55.8 91 34.1
SHI16765 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 55.8 88 34.1
SHI19839 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 55.8 88 34.1
SHI28896 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 55.8 83 36.1
SHI29707 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 55.8 91 33.0
SHI35079 Sapria himalayana HOM05D002705 ORTHO05D000001 1.8e-06 55.8 91 33.0
Atru.chr5.2970 Acer truncatum HOM05D000002 ORTHO05D000001 2.4e-06 55.5 83 36.1
CAN.G186.11 Capsicum annuum HOM05D000821 ORTHO05D000001 2.4e-06 55.5 78 39.7
ClCG04G004290 Citrullus lanatus HOM05D000002 ORTHO05D000001 2.4e-06 55.5 83 34.9
HanXRQChr12g0367671 Helianthus annuus HOM05D000002 ORTHO05D000001 2.4e-06 55.5 92 35.9
SHI18782 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 55.5 88 34.1
SHI32554 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 55.5 91 33.0
SHI35799 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 55.5 88 34.1
CSS0034005 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 3.1e-06 55.1 88 33.0
Lalb_Chr23g0274101 Lupinus albus HOM05D000006 ORTHO05D000001 3.1e-06 55.1 91 30.8
Rhsim01G0080600 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.1e-06 55.1 91 30.8
RcHm_v2.0_Chr1g0330721 Rosa chinensis HOM05D000002 ORTHO05D000001 3.1e-06 55.1 91 33.0
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 3.1e-06 55.1 91 33.0
TWI09G0578 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 3.1e-06 55.1 96 28.1
CSS0016795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-06 54.7 82 32.9
CSS0032463 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 4.0e-06 54.7 96 30.2
QL03p042293 Quercus lobata HOM05D000002 ORTHO05D000001 4.0e-06 54.7 94 29.8
QL04p083744 Quercus lobata HOM05D000002 ORTHO05D000001 4.0e-06 54.7 94 29.8
QL09p045312 Quercus lobata HOM05D000002 ORTHO05D000001 4.0e-06 54.7 94 29.8
QL12p033733 Quercus lobata HOM05D000002 ORTHO05D000001 4.0e-06 54.7 94 29.8
Rhsim11G0030000 Rhododendron simsii HOM05D000006 ORTHO05D000001 4.0e-06 54.7 89 31.5
SHI12753 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-06 54.7 91 33.0
SHI28095 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-06 54.7 88 34.1
Solyc07g053035.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 4.0e-06 54.7 78 34.6
Duzib170G0209 Durio zibethinus HOM05D000002 ORTHO05D000001 5.2e-06 54.3 94 30.9
ECA232G1928 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-06 54.3 86 36.0
HanXRQChr03g0067731 Helianthus annuus HOM05D000002 ORTHO05D000001 5.2e-06 54.3 82 34.1
Pp3c18_14670 Physcomitrium patens HOM05D000002 ORTHO05D000001 5.2e-06 54.3 95 35.8
RcHm_v2.0_Chr1g0329831 Rosa chinensis HOM05D000002 ORTHO05D000001 5.2e-06 54.3 91 30.8
SHI20413 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-06 54.3 88 34.1
SHI21792 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-06 54.3 88 33.0
SEGI_26654 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.2e-06 54.3 84 35.7
SEGI_28372 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.2e-06 54.3 84 35.7
SEGI_40071 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.2e-06 54.3 84 35.7
Solyc07g043713.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 5.2e-06 54.3 78 34.6
arahy.Tifrunner.gnm1.ann1.2CQC5M Arachis hypogaea HOM05D000002 ORTHO05D000001 6.9e-06 53.9 86 34.9
CANSAT01G3282 Cannabis sativa HOM05D000006 ORTHO05D000001 6.9e-06 53.9 86 33.7
ECA238G0299 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.9e-06 53.9 82 31.7
ECA238G1149 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-06 53.9 86 32.6
ECA248G1039 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-06 53.9 86 32.6
Manes.16G057275 Manihot esculenta HOM05D000006 ORTHO05D000001 6.9e-06 53.9 86 30.2
SHI06982 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-06 53.9 88 34.1
SHI21288 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-06 53.9 91 34.1
SHI25171 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-06 53.9 91 33.0
SEGI_38000 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.9e-06 53.9 94 30.9
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.0e-06 53.5 91 33.0
Hma1.2p1_0279F.1_g112030 Hydrangea macrophylla HOM05D000006 ORTHO05D000001 9.0e-06 53.5 86 33.7
MD10G1162100 Malus domestica HOM05D000002 ORTHO05D000001 9.0e-06 53.5 85 35.3
PSO339G5984 Papaver somniferum HOM05D000002 ORTHO05D000001 9.0e-06 53.5 86 31.4
SHI00860 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-06 53.5 88 33.0
SHI54047 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-06 53.5 88 33.0
SEGI_15431 Sequoiadendron giganteum HOM05D003871 ORTHO05D004621 9.0e-06 53.5 84 35.7
SEGI_35341 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 9.0e-06 53.5 84 35.7
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 9.0e-06 53.5 91 33.0
Sopen06g019130 Solanum pennellii HOM05D000002 ORTHO05D000001 9.0e-06 53.5 91 33.0
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 9.0e-06 53.5 91 33.0
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 9.0e-06 53.5 91 33.0
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 9.0e-06 53.5 91 33.0
TWI74G1068 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 9.0e-06 53.5 78 37.2


User provided reference genes

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