Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_23510 Physcomitrium patens HOM05D008020 ORTHO05D010140 8.9e-87 323.6 161 100.0
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 5.9e-14 81.6 104 49.0
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 5.7e-09 65.1 88 48.9
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 5.7e-09 65.1 88 48.9
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 2.8e-08 62.8 97 44.3
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 4.8e-08 62.0 90 44.4
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 6.3e-08 61.6 90 43.3
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 6.3e-08 61.6 78 47.4
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 8.2e-08 61.2 76 48.7
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 1.1e-07 60.8 80 47.5
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 1.8e-07 60.1 76 46.1
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 1.8e-07 60.1 91 42.9
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 1.8e-07 60.1 90 43.3
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 2.4e-07 59.7 89 43.8
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 2.4e-07 59.7 75 46.7
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 2.4e-07 59.7 90 42.2
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 3.1e-07 59.3 90 42.2
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 4.1e-07 58.9 77 49.4
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 4.1e-07 58.9 90 44.4
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 4.1e-07 58.9 81 44.4
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 5.3e-07 58.5 88 40.9
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 5.3e-07 58.5 72 44.4
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 5.3e-07 58.5 90 43.3
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 7.0e-07 58.2 76 48.7
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 7.0e-07 58.2 79 45.6
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 7.0e-07 58.2 96 42.7
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 9.1e-07 57.8 88 42.0
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 9.1e-07 57.8 94 39.4
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 9.1e-07 57.8 94 39.4
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 9.1e-07 57.8 91 41.8
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 1.2e-06 57.4 87 42.5
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 1.2e-06 57.4 79 45.6
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 1.2e-06 57.4 75 41.3
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 1.6e-06 57.0 69 49.3
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 1.6e-06 57.0 76 47.4
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 2.0e-06 56.6 108 36.1
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 2.0e-06 56.6 77 46.8
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 2.0e-06 56.6 86 41.9
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 2.0e-06 56.6 78 44.9
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 2.0e-06 56.6 91 42.9
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 2.0e-06 56.6 75 48.0
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 2.0e-06 56.6 74 45.9
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 2.6e-06 56.2 81 39.5
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 2.6e-06 56.2 76 46.1
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 2.6e-06 56.2 80 41.2
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 2.6e-06 56.2 78 44.9
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 2.6e-06 56.2 71 52.1
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 3.5e-06 55.8 77 48.1
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 3.5e-06 55.8 96 42.7
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 3.5e-06 55.8 91 42.9
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 4.5e-06 55.5 80 45.0
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 4.5e-06 55.5 75 42.7
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 4.5e-06 55.5 81 45.7
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 4.5e-06 55.5 106 37.7
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 7.7e-06 54.7 72 45.8


User provided reference genes

Program Settings