Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 1.1e-295 1019.2 544 100.0
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 1.1e-43 182.2 494 33.0
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 1.8e-38 164.9 536 29.7
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 2.3e-38 164.5 537 29.6
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 8.9e-38 162.5 532 29.1
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 2.0e-37 161.4 538 28.8
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 1.7e-36 158.3 540 29.3
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 2.9e-36 157.5 556 28.6
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 4.9e-36 156.8 532 28.4
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 8.3e-36 156.0 542 29.2
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 3.2e-35 154.1 547 28.2
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 7.0e-35 152.9 530 29.2
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 2.0e-34 151.4 546 28.9
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 2.7e-34 151.0 547 26.9
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 3.5e-34 150.6 538 27.1
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 4.6e-34 150.2 548 27.7
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 7.8e-34 149.4 529 27.8
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 1.0e-33 149.1 535 26.4
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 2.9e-33 147.5 527 26.8
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 3.9e-33 147.1 543 26.7
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 3.9e-33 147.1 554 28.3
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 6.6e-33 146.4 552 27.0
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 1.1e-32 145.6 543 28.0
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 1.1e-32 145.6 560 27.5
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 2.5e-32 144.4 525 28.4
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 4.3e-32 143.7 547 27.4
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 5.6e-32 143.3 540 25.4
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 7.3e-32 142.9 576 28.3
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 9.5e-32 142.5 597 28.0
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 1.2e-31 142.1 543 27.8
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 1.6e-31 141.7 536 28.4
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 2.1e-31 141.4 530 26.6
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 2.1e-31 141.4 553 27.5
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 3.6e-31 140.6 533 26.3
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 3.6e-31 140.6 526 27.4
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 6.2e-31 139.8 551 26.9
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 1.4e-30 138.7 546 26.6
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 1.4e-30 138.7 545 26.8
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 1.8e-30 138.3 532 27.3
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.8e-30 138.3 602 28.1
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 2.3e-30 137.9 541 29.0
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 4.0e-30 137.1 547 27.2
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 5.2e-30 136.7 541 28.8
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 6.8e-30 136.3 548 27.2
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 8.9e-30 136.0 546 27.5
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.2e-29 135.6 561 27.1
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 1.2e-29 135.6 544 27.4
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 3.4e-29 134.0 542 26.2
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 5.8e-29 133.3 562 26.5
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 7.5e-29 132.9 522 26.6
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 9.8e-29 132.5 564 25.9
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 9.8e-29 132.5 571 26.1
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 9.8e-29 132.5 550 28.0
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 1.7e-28 131.7 591 26.2
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 2.9e-28 131.0 533 25.9
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 3.7e-28 130.6 541 27.2
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 8.3e-28 129.4 603 26.5
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 1.9e-27 128.3 547 25.8
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 4.1e-27 127.1 530 30.0
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 1.2e-26 125.6 598 26.9
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 1.2e-26 125.6 555 26.5
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 6.0e-26 123.2 537 26.3
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 1.0e-25 122.5 549 26.8
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 1.0e-25 122.5 480 28.1
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 2.3e-25 121.3 450 29.8
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 2.3e-25 121.3 555 28.8
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.0e-25 120.9 552 25.9
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.0e-25 120.9 549 26.8
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 8.6e-25 119.4 507 28.0
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 1.1e-24 119.0 558 26.3
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 9.5e-24 115.9 514 27.4
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 1.4e-22 112.1 649 24.5
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.8e-22 111.7 619 26.2
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 4.0e-22 110.5 572 25.2
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 4.4e-21 107.1 472 28.4
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 5.8e-21 106.7 598 25.8
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 5.8e-21 106.7 595 24.5
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 2.2e-20 104.8 384 26.0
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 2.4e-19 101.3 470 28.1
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 1.7e-17 95.1 465 26.2
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 1.7e-17 95.1 476 26.7
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 6.6e-17 93.2 427 25.8
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 2.5e-16 91.3 569 23.0
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 1.6e-15 88.6 532 25.9
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 4.7e-15 87.0 224 33.5
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 6.8e-14 83.2 469 27.1
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 1.5e-13 82.0 460 22.4
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 1.3e-12 79.0 191 34.6
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 8.4e-12 76.3 111 36.0
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 7.8e-10 69.7 173 34.1
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 7.8e-10 69.7 173 34.1
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 8.6e-09 66.2 170 28.8


User provided reference genes

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