Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_22930 Physcomitrium patens HOM05D004108 ORTHO05D004849 3.9e-75 284.6 138 100.0
Pp3c16_7660 Physcomitrium patens HOM05D004108 ORTHO05D004849 2.4e-16 89.4 135 40.0
AagrBONN_evm.TU.Sc2ySwM_344.1816 Anthoceros agrestis HOM05D004108 ORTHO05D004849 4.3e-13 78.6 143 37.8
Mapoly0085s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 3.1e-11 72.4 131 33.6
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 4.0e-11 72.0 128 37.5
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 1.5e-10 70.1 118 37.3
Mapoly0212s0008 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.5e-10 70.1 134 35.8
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 3.4e-10 68.9 131 35.9
Sopen04g034130 Solanum pennellii HOM05D004108 ORTHO05D004849 3.4e-10 68.9 135 37.0
unitig_899.g15617 Utricularia gibba HOM05D004108 ORTHO05D004849 3.4e-10 68.9 139 40.3
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 7.5e-10 67.8 133 35.3
Solyc04g080540.2 Solanum lycopersicum HOM05D004108 ORTHO05D004849 7.5e-10 67.8 135 36.3
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 1.7e-09 66.6 118 37.3
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 2.2e-09 66.2 133 34.6
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 2.2e-09 66.2 139 36.7
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.9e-09 65.9 133 34.6
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 2.9e-09 65.9 111 37.8
PSO541G2330 Papaver somniferum HOM05D004108 ORTHO05D004849 3.7e-09 65.5 137 34.3
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 4.9e-09 65.1 133 32.3
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 6.4e-09 64.7 138 34.8
PGSC0003DMG400003688 Solanum tuberosum HOM05D004108 ORTHO05D004849 6.4e-09 64.7 134 37.3
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 6.4e-09 64.7 147 32.0
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 8.3e-09 64.3 138 34.8
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 8.3e-09 64.3 138 34.1
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 1.1e-08 63.9 107 36.4
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 1.1e-08 63.9 115 39.1
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 1.4e-08 63.5 135 35.6
CDE02G0765 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 1.4e-08 63.5 124 37.1
CDE06G1682 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 1.4e-08 63.5 123 36.6
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 1.4e-08 63.5 134 33.6
Mapoly0212s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.4e-08 63.5 116 36.2
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 1.9e-08 63.2 125 35.2
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 1.9e-08 63.2 136 31.6
AUR62003937 Chenopodium quinoa HOM05D004108 ORTHO05D004849 2.4e-08 62.8 148 35.1
AUR62014478 Chenopodium quinoa HOM05D004108 ORTHO05D004849 2.4e-08 62.8 148 35.1
Mapoly0203s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.4e-08 62.8 107 35.5
FAN20G2373 Fragaria x ananassa HOM05D004108 ORTHO05D004849 3.2e-08 62.4 140 32.1
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 3.2e-08 62.4 135 31.1
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 4.1e-08 62.0 139 32.4
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 4.1e-08 62.0 133 33.1
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 4.1e-08 62.0 127 31.5
PSO675G8146 Papaver somniferum HOM05D004108 ORTHO05D004849 4.1e-08 62.0 136 33.8
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 4.1e-08 62.0 146 32.2
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 4.1e-08 62.0 114 35.1
CANSAT25G0460 Cannabis sativa HOM05D004108 ORTHO05D004849 5.4e-08 61.6 124 33.9
Prupe.1G377400 Prunus persica HOM05D004108 ORTHO05D004849 5.4e-08 61.6 114 36.8
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 7.1e-08 61.2 137 34.3
Lsat_1_v5_gn_5_27881 Lactuca sativa HOM05D004108 ORTHO05D004849 7.1e-08 61.2 140 32.9
MD08G1029700 Malus domestica HOM05D004108 ORTHO05D004849 7.1e-08 61.2 108 34.3
Os03g0826800 Oryza sativa ssp. japonica HOM05D004108 ORTHO05D004849 7.1e-08 61.2 140 32.1
Mapoly0085s0006 Marchantia polymorpha HOM05D004108 ORTHO05D004849 9.2e-08 60.8 129 31.0
EL10Ac1g00610 Beta vulgaris HOM05D004108 ORTHO05D004849 1.2e-07 60.5 137 32.8
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 1.2e-07 60.5 128 32.8
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 1.6e-07 60.1 128 33.6
Hund26890 Selenicereus undatus HOM05D004108 ORTHO05D004849 1.6e-07 60.1 110 35.5
Hund29908 Selenicereus undatus HOM05D004108 ORTHO05D004849 1.6e-07 60.1 110 35.5
C05p18030 Brassica napus HOM05D004108 ORTHO05D004849 2.1e-07 59.7 128 30.5
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 2.1e-07 59.7 109 33.0
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.1e-07 59.7 136 33.8
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 2.1e-07 59.7 128 32.0
BcaB07g31980 Brassica carinata HOM05D004108 ORTHO05D004849 3.5e-07 58.9 128 30.5
BcaC05g25839 Brassica carinata HOM05D004108 ORTHO05D004849 3.5e-07 58.9 128 30.5
BolC5t30510H Brassica oleracea HOM05D004108 ORTHO05D004849 3.5e-07 58.9 128 30.5
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 3.5e-07 58.9 129 34.9
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 3.5e-07 58.9 124 36.3
RcHm_v2.0_Chr6g0301271 Rosa chinensis HOM05D004108 ORTHO05D004849 3.5e-07 58.9 124 35.5
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 3.5e-07 58.9 128 34.4
MBI18_g38882_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 4.6e-07 58.5 122 36.1
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 4.6e-07 58.5 140 31.4
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 6.0e-07 58.2 138 29.7
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 6.0e-07 58.2 108 33.3
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 6.0e-07 58.2 140 30.0
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 7.8e-07 57.8 114 33.3
FvH4_2g39630 Fragaria vesca HOM05D004108 ORTHO05D004849 7.8e-07 57.8 139 32.4
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 7.8e-07 57.8 126 29.4
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 7.8e-07 57.8 135 32.6
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 7.8e-07 57.8 126 34.9
Mapoly0212s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 7.8e-07 57.8 116 34.5
HPP92_003110 Vanilla planifolia HOM05D004108 ORTHO05D004849 7.8e-07 57.8 109 36.7
A06p15710 Brassica napus HOM05D004108 ORTHO05D004849 1.0e-06 57.4 128 29.7
ECA246G2053 Erigeron canadensis HOM05D004108 ORTHO05D004849 1.3e-06 57.0 149 29.5
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 1.7e-06 56.6 116 32.8
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 1.7e-06 56.6 145 31.7
Lsat_1_v5_gn_4_117601 Lactuca sativa HOM05D004108 ORTHO05D004849 1.7e-06 56.6 137 32.8
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 1.7e-06 56.6 128 32.8
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 2.3e-06 56.2 123 35.0
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 2.3e-06 56.2 119 36.1
BraA06t24680Z Brassica rapa HOM05D004108 ORTHO05D004849 3.0e-06 55.8 128 28.9
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 3.0e-06 55.8 135 31.9
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 3.0e-06 55.8 139 33.1
SEGI_15325 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 3.0e-06 55.8 145 31.7
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 3.0e-06 55.8 121 28.9
Cpa.g.sc31.39 Carica papaya HOM05D004108 ORTHO05D004849 3.9e-06 55.5 109 33.0
ECA232G2533 Erigeron canadensis HOM05D004108 ORTHO05D004849 3.9e-06 55.5 141 33.3
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 3.9e-06 55.5 128 32.0
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 5.1e-06 55.1 130 31.5
Aa31LG7G4180 Aethionema arabicum HOM05D004108 ORTHO05D004849 6.6e-06 54.7 129 31.8
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 6.6e-06 54.7 116 31.0
CsaV3_2G028830 Cucumis sativus L. HOM05D004108 ORTHO05D004849 8.6e-06 54.3 116 32.8
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 8.6e-06 54.3 139 30.2
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 8.6e-06 54.3 139 30.2
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 8.6e-06 54.3 138 31.2
Mapoly0152s0035 Marchantia polymorpha HOM05D004108 ORTHO05D004849 8.6e-06 54.3 149 29.5
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 8.6e-06 54.3 113 31.9


User provided reference genes

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