Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 1.2e-186 656.4 347 100.0
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 9.8e-99 364.4 280 65.4
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 2.0e-91 340.1 279 60.6
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 5.4e-81 305.4 288 54.5
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 1.6e-80 303.9 281 56.2
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 2.7e-80 303.1 283 55.8
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 4.6e-80 302.4 327 53.2
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 4.6e-80 302.4 283 55.5
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 1.0e-79 301.2 306 54.2
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 1.0e-79 301.2 295 54.6
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 1.3e-79 300.8 295 54.6
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 1.7e-79 300.4 296 55.1
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 6.6e-79 298.5 292 54.5
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 8.6e-79 298.1 290 55.2
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 1.1e-78 297.7 295 54.2
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 1.1e-78 297.7 295 54.9
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.1e-78 297.7 279 54.5
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 1.5e-78 297.4 329 51.4
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 1.9e-78 297.0 281 56.2
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 4.3e-78 295.8 259 58.7
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 4.3e-78 295.8 324 51.2
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 5.6e-78 295.4 281 53.7
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 7.3e-78 295.0 296 52.4
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 9.5e-78 294.7 259 58.3
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 1.2e-77 294.3 297 53.5
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.2e-77 294.3 303 52.5
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 2.8e-77 293.1 318 50.0
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 2.8e-77 293.1 313 51.1
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 4.7e-77 292.4 290 52.8
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 4.7e-77 292.4 281 52.3
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 6.2e-77 292.0 281 53.4
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 6.2e-77 292.0 280 53.6
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 6.2e-77 292.0 281 54.8
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 8.1e-77 291.6 319 51.7
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 8.1e-77 291.6 321 48.3
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 8.1e-77 291.6 281 54.8
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.1e-76 291.2 281 54.4
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 1.1e-76 291.2 290 52.8
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 1.4e-76 290.8 343 48.1
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.8e-76 290.4 303 51.8
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 2.3e-76 290.0 281 53.4
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 3.1e-76 289.7 290 52.8
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 4.0e-76 289.3 338 47.3
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 4.0e-76 289.3 283 51.9
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 5.2e-76 288.9 293 51.9
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 1.2e-75 287.7 281 52.7
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 1.2e-75 287.7 280 53.6
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 1.2e-75 287.7 280 52.9
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 1.5e-75 287.3 281 52.0
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.5e-75 287.3 321 48.0
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 2.6e-75 286.6 293 52.2
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 2.6e-75 286.6 280 53.2
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 3.4e-75 286.2 289 53.3
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 3.4e-75 286.2 287 51.9
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 4.4e-75 285.8 332 49.4
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 4.4e-75 285.8 334 47.6
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 4.4e-75 285.8 317 48.6
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 4.4e-75 285.8 277 53.1
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 5.8e-75 285.4 265 56.2
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 5.8e-75 285.4 315 50.5
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 1.3e-74 284.3 277 53.1
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 1.7e-74 283.9 306 50.0
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.7e-74 283.9 281 51.6
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 2.2e-74 283.5 282 51.8
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 2.9e-74 283.1 303 49.5
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 2.9e-74 283.1 261 54.8
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 2.9e-74 283.1 272 53.3
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 2.9e-74 283.1 279 53.8
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 2.9e-74 283.1 282 51.1
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 3.7e-74 282.7 334 47.3
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 3.7e-74 282.7 333 48.9
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 4.9e-74 282.3 283 52.3
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 6.4e-74 282.0 307 51.8
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 1.1e-73 281.2 260 54.6
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 3.2e-73 279.6 281 52.3
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 5.4e-73 278.9 246 58.5
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 7.1e-73 278.5 293 49.5
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 7.1e-73 278.5 294 51.0
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 2.1e-72 276.9 245 58.8
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 2.7e-72 276.6 306 49.0
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.7e-71 273.9 291 51.2
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 2.3e-71 273.5 300 50.0
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 2.3e-71 273.5 304 50.3
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 3.9e-71 272.7 280 52.9
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 8.6e-71 271.6 242 55.4
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.5e-70 270.8 246 54.1
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 1.5e-70 270.8 259 54.4
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 3.3e-70 269.6 278 53.2
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 9.6e-70 268.1 280 51.1
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 3.6e-69 266.2 245 56.3
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 6.2e-69 265.4 264 54.5
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 2.4e-68 263.5 260 53.5
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 2.2e-66 256.9 322 45.3
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 7.1e-65 251.9 221 57.5
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 1.0e-63 248.1 301 46.8
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 1.3e-63 247.7 288 47.9
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.9e-62 243.8 221 53.8
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 7.3e-62 241.9 301 45.8
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 2.9e-58 229.9 241 51.9
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 1.4e-57 227.6 292 46.9
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 3.2e-57 226.5 284 44.0
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 6.0e-56 222.2 298 44.3
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 8.7e-55 218.4 227 50.2
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 2.0e-51 207.2 321 39.6
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 8.1e-45 185.3 148 59.5
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.7e-42 177.6 185 48.1
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 2.1e-37 160.6 245 41.2
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.5e-30 137.1 137 49.6
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.2e-24 118.2 88 67.0
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 3.6e-24 116.7 88 67.0
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 1.1e-22 111.7 113 48.7
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.4e-20 104.8 81 64.2
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 1.4e-20 104.8 260 33.8
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 1.0e-15 88.6 66 65.2
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 5.7e-14 82.8 61 59.0
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.8e-13 80.5 64 57.8


User provided reference genes

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