Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_21690 Physcomitrium patens HOM05D003630 ORTHO05D004151 6.9e-87 323.9 163 100.0
Pp3c10_24000 Physcomitrium patens HOM05D003630 ORTHO05D004151 1.1e-76 290.0 163 89.6
Pp3c23_13750 Physcomitrium patens HOM05D003630 ORTHO05D004151 6.7e-66 254.2 173 75.7
Pp3c24_1050 Physcomitrium patens HOM05D003630 ORTHO05D004151 6.3e-56 221.1 163 71.2
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 9.1e-31 137.5 167 53.9
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 3.7e-24 115.5 157 49.7
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 1.7e-21 106.7 155 47.7
AagrBONN_evm.TU.Sc2ySwM_362.1976 Anthoceros agrestis HOM05D003630 ORTHO05D004151 2.5e-20 102.8 214 39.7
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 2.9e-16 89.4 161 41.0
ATR0681G069 Amborella trichopoda HOM05D002144 ORTHO05D002170 4.9e-16 88.6 163 38.7
MBI19_g38000_MAGBIO Magnolia biondii HOM05D002144 ORTHO05D002170 1.7e-13 80.1 164 39.6
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 1.5e-12 77.0 159 40.9
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 2.8e-11 72.8 157 36.9
Migut.N02089 Erythranthe guttata HOM05D002144 ORTHO05D002170 1.7e-08 63.5 107 44.9
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 2.2e-08 63.2 162 30.2
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 2.2e-08 63.2 155 31.6
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 3.7e-08 62.4 157 29.3
Dinv37840 Davidia involucrata HOM05D002144 ORTHO05D002170 3.7e-08 62.4 166 37.3
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 3.7e-08 62.4 159 30.2
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 4.9e-08 62.0 159 32.1
Zm00001eb040560 Zea mays HOM05D002144 ORTHO05D002170 4.9e-08 62.0 169 34.9
Duzib235G0612 Durio zibethinus HOM05D002144 ORTHO05D002170 8.3e-08 61.2 164 34.8
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 8.3e-08 61.2 155 31.6
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.1e-07 60.8 156 30.1
PGR119G1483 Punica granatum HOM05D002144 ORTHO05D002170 1.1e-07 60.8 163 32.5
GSVIVG01016701001 Vitis vinifera HOM05D002144 ORTHO05D002170 1.1e-07 60.8 165 34.5
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 1.4e-07 60.5 155 27.1
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.4e-07 60.5 157 28.7
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 1.4e-07 60.5 155 30.3
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 1.4e-07 60.5 155 31.6
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.9e-07 60.1 155 30.3
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 2.4e-07 59.7 156 32.1
Gohir.A05G138200 Gossypium hirsutum HOM05D002144 ORTHO05D002170 2.4e-07 59.7 164 34.1
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 2.4e-07 59.7 157 31.2
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 2.4e-07 59.7 155 31.0
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 3.2e-07 59.3 159 31.4
ATR0796G073 Amborella trichopoda HOM05D002144 ORTHO05D002170 3.2e-07 59.3 139 36.7
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 3.2e-07 59.3 153 30.1
FvH4_6g35330 Fragaria vesca HOM05D002144 ORTHO05D002170 3.2e-07 59.3 167 35.9
FAN09G1588 Fragaria x ananassa HOM05D002144 ORTHO05D002170 3.2e-07 59.3 167 35.9
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 3.2e-07 59.3 155 31.0
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 4.1e-07 58.9 159 30.8
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 4.1e-07 58.9 160 30.6
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 4.1e-07 58.9 155 31.0
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 4.1e-07 58.9 155 30.3
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 5.4e-07 58.5 155 29.0
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 5.4e-07 58.5 158 29.1
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 5.4e-07 58.5 155 31.6
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 5.4e-07 58.5 155 29.7
Nn8g38544 Nelumbo nucifera HOM05D002144 ORTHO05D002170 5.4e-07 58.5 165 32.7
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 5.4e-07 58.5 155 31.6
SMO147G0175 Selaginella moellendorffii HOM05D002144 ORTHO05D002170 7.1e-07 58.2 163 34.4
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 9.2e-07 57.8 155 31.6
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 9.2e-07 57.8 158 29.1
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.2e-06 57.4 155 29.0
Duzib192G0893 Durio zibethinus HOM05D002144 ORTHO05D002170 1.2e-06 57.4 163 34.4
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.2e-06 57.4 155 28.4
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.2e-06 57.4 155 28.4
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 1.2e-06 57.4 156 32.1
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 1.2e-06 57.4 155 29.7
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 1.2e-06 57.4 157 32.5
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 1.6e-06 57.0 157 29.9
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 1.6e-06 57.0 162 29.0
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 1.6e-06 57.0 157 29.9
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 1.6e-06 57.0 155 31.0
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 1.6e-06 57.0 161 30.4
Nn3g21509 Nelumbo nucifera HOM05D002144 ORTHO05D002170 1.6e-06 57.0 123 41.5
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 1.6e-06 57.0 155 30.3
Hund05715 Selenicereus undatus HOM05D002144 ORTHO05D002170 1.6e-06 57.0 174 32.2
Cfa006639 Carpinus fangiana HOM05D002144 ORTHO05D002170 2.1e-06 56.6 156 35.3
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 2.1e-06 56.6 159 29.6
Haze_04128 Corylus avellana HOM05D002144 ORTHO05D002170 2.1e-06 56.6 153 34.0
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 2.1e-06 56.6 154 29.9
PSO223G0023 Papaver somniferum HOM05D002144 ORTHO05D002170 2.1e-06 56.6 163 32.5
PSO724G0168 Papaver somniferum HOM05D002144 ORTHO05D002170 2.1e-06 56.6 114 41.2
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 2.1e-06 56.6 155 27.1
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 2.1e-06 56.6 156 31.4
Hund21717 Selenicereus undatus HOM05D002144 ORTHO05D002170 2.1e-06 56.6 76 43.4
HanXRQChr11g0320831 Helianthus annuus HOM05D002144 ORTHO05D002170 2.7e-06 56.2 114 37.7
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 2.7e-06 56.2 155 32.3
PGR102G1253 Punica granatum HOM05D002144 ORTHO05D002170 2.7e-06 56.2 163 31.9
HPP92_013722 Vanilla planifolia HOM05D002144 ORTHO05D002170 2.7e-06 56.2 77 41.6
EL10Ac7g16456 Beta vulgaris HOM05D002144 ORTHO05D002170 3.5e-06 55.8 164 33.5
Glyma.20G237200 Glycine max HOM05D002144 ORTHO05D002170 3.5e-06 55.8 137 35.0
PSO386G0162 Papaver somniferum HOM05D002144 ORTHO05D002170 3.5e-06 55.8 163 31.9
Phvul.007G197700 Phaseolus vulgaris HOM05D002144 ORTHO05D002170 3.5e-06 55.8 137 32.8
PGR083G0389 Punica granatum HOM05D002144 ORTHO05D002170 3.5e-06 55.8 145 35.9
HPP92_011851 Vanilla planifolia HOM05D002144 ORTHO05D002170 3.5e-06 55.8 76 47.4
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 4.6e-06 55.5 156 30.8
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 4.6e-06 55.5 155 27.7
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 4.6e-06 55.5 155 27.7
Lj5g0009461 Lotus japonicus HOM05D002144 ORTHO05D002170 4.6e-06 55.5 122 37.7
Prupe.6G319600 Prunus persica HOM05D002144 ORTHO05D002170 4.6e-06 55.5 114 37.7
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 4.6e-06 55.5 155 29.0
Sc16g0008780 Simmondsia chinensis HOM05D002144 ORTHO05D002170 4.6e-06 55.5 137 35.8
TAR365G0709 Trochodendron aralioides HOM05D002144 ORTHO05D002170 4.6e-06 55.5 118 40.7
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 6.0e-06 55.1 156 30.1
Gorai.007G341000 Gossypium raimondii HOM05D002144 ORTHO05D002170 6.0e-06 55.1 117 37.6
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 6.0e-06 55.1 155 29.0
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 6.0e-06 55.1 155 28.4
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 7.8e-06 54.7 159 29.6
PSO729G0021 Papaver somniferum HOM05D002144 ORTHO05D002170 7.8e-06 54.7 130 39.2
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 7.8e-06 54.7 155 28.4


User provided reference genes

Program Settings