Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_19360 Physcomitrium patens HOM05D006334 ORTHO05D008320 1.1e-120 437.2 312 100.0
Phvul.005G092400 Phaseolus vulgaris HOM05D006334 ORTHO05D008320 2.3e-54 216.9 207 65.7
Psat5g251960 Pisum sativum HOM05D006334 ORTHO05D008320 2.8e-52 209.9 204 67.2
Lj3g0002745 Lotus japonicus HOM05D006334 ORTHO05D008320 5.2e-51 205.7 204 63.7
AagrBONN_evm.TU.Sc2ySwM_228.581 Anthoceros agrestis HOM05D006334 ORTHO05D008320 4.4e-50 202.6 193 67.4
Medtr2g083200 Medicago truncatula HOM05D006334 ORTHO05D008320 4.4e-50 202.6 196 65.3
CDE05G3377 Ceratophyllum demersum HOM05D006334 ORTHO05D008320 7.6e-50 201.8 189 69.3
Ca_01740_v3 Cicer arietinum L. HOM05D006334 ORTHO05D008320 9.9e-50 201.4 132 75.0
Mapoly0114s0022 Marchantia polymorpha HOM05D006334 ORTHO05D008320 2.2e-49 200.3 304 57.9
Glyma.12G213500 Glycine max HOM05D006334 ORTHO05D008320 4.9e-49 199.1 132 74.2
QL08p012879 Quercus lobata HOM05D006334 ORTHO05D008320 4.9e-49 199.1 209 55.5
CSS0039549 Camellia sinensis var. sinensis HOM05D006334 ORTHO05D008320 6.4e-49 198.7 178 63.5
Glyma.13G288200 Glycine max HOM05D006334 ORTHO05D008320 1.4e-48 197.6 132 74.2
Dinv22296 Davidia involucrata HOM05D006334 ORTHO05D008320 1.9e-48 197.2 177 59.9
QL08p012752 Quercus lobata HOM05D006334 ORTHO05D008320 1.9e-48 197.2 178 70.2
VMungo1080G0184 Vigna mungo HOM05D006334 ORTHO05D008320 2.4e-48 196.8 195 64.6
AUR62020535 Chenopodium quinoa HOM05D006334 ORTHO05D008320 3.2e-48 196.4 195 61.5
TPR.G19971 Trifolium pratense HOM05D006334 ORTHO05D008320 3.2e-48 196.4 132 74.2
DCAR_022532 Daucus carota HOM05D006334 ORTHO05D008320 5.4e-48 195.7 295 51.2
FAN25G1013 Fragaria x ananassa HOM05D006334 ORTHO05D008320 5.4e-48 195.7 295 57.3
Potri.001G418900 Populus trichocarpa HOM05D006334 ORTHO05D008320 5.4e-48 195.7 296 45.9
HPP92_014117 Vanilla planifolia HOM05D006334 ORTHO05D008320 9.2e-48 194.9 194 69.6
AagrBONN_evm.TU.Sc2ySwM_368.826 Anthoceros agrestis HOM05D006334 ORTHO05D008320 1.2e-47 194.5 215 59.1
Ah.04g165560 Amaranthus hybridus HOM05D006334 ORTHO05D008320 1.6e-47 194.1 294 49.0
Hund23297 Selenicereus undatus HOM05D006334 ORTHO05D008320 1.6e-47 194.1 294 57.8
Cfa020403 Carpinus fangiana HOM05D001306 ORTHO05D001159 2.7e-47 193.4 178 58.4
AUR62005409 Chenopodium quinoa HOM05D006334 ORTHO05D008320 3.5e-47 193.0 178 66.3
AUR62015668 Chenopodium quinoa HOM05D006334 ORTHO05D008320 4.6e-47 192.6 175 68.0
HanXRQChr11g0337741 Helianthus annuus HOM05D006334 ORTHO05D008320 4.6e-47 192.6 178 70.8
RcHm_v2.0_Chr5g0037801 Rosa chinensis HOM05D006334 ORTHO05D008320 4.6e-47 192.6 295 51.5
Aqoxy1G03666 Aquilegia oxysepala HOM05D006334 ORTHO05D008320 6.0e-47 192.2 178 66.3
Sopen10g002410 Solanum pennellii HOM05D006334 ORTHO05D008320 6.0e-47 192.2 133 74.4
arahy.Tifrunner.gnm1.ann1.Q0MPW2 Arachis hypogaea HOM05D006334 ORTHO05D008320 1.0e-46 191.4 294 58.8
CiPaw.12G127100 Carya illinoinensis HOM05D006334 ORTHO05D008320 1.0e-46 191.4 295 58.6
Lalb_Chr24g0400251 Lupinus albus HOM05D006334 ORTHO05D008320 1.0e-46 191.4 132 71.2
Solyc10g006460.3 Solanum lycopersicum HOM05D006334 ORTHO05D008320 1.0e-46 191.4 133 74.4
PGSC0003DMG400014399 Solanum tuberosum HOM05D006334 ORTHO05D008320 1.0e-46 191.4 133 74.4
vmacro09744 Vaccinium macrocarpon HOM05D006334 ORTHO05D008320 1.0e-46 191.4 178 70.8
CAN.G1110.6 Capsicum annuum HOM05D006334 ORTHO05D008320 1.7e-46 190.7 132 72.7
GSVIVG01001978001 Vitis vinifera HOM05D006334 ORTHO05D008320 1.7e-46 190.7 178 70.2
Eucgr.F03434 Eucalyptus grandis HOM05D006334 ORTHO05D008320 3.0e-46 189.9 178 68.0
Nitab4.5_0002229g0170 Nicotiana tabacum HOM05D006334 ORTHO05D008320 3.0e-46 189.9 177 69.5
Zm00001eb298180 Zea mays HOM05D006334 ORTHO05D008320 3.9e-46 189.5 188 59.0
Sc07g0002760 Simmondsia chinensis HOM05D006334 ORTHO05D008320 5.1e-46 189.1 177 68.9
Manes.03G123900 Manihot esculenta HOM05D006334 ORTHO05D008320 6.6e-46 188.7 178 69.7
TAR629G3436 Trochodendron aralioides HOM05D006334 ORTHO05D008320 6.6e-46 188.7 133 72.2
Gohir.A01G075500 Gossypium hirsutum HOM05D006334 ORTHO05D008320 8.6e-46 188.3 133 71.4
arahy.Tifrunner.gnm1.ann1.9AY9GA Arachis hypogaea HOM05D006334 ORTHO05D008320 1.1e-45 188.0 294 58.2
Ciclev10009059m.g Citrus clementina HOM05D006334 ORTHO05D008320 1.1e-45 188.0 178 68.0
Gorai.002G083500 Gossypium raimondii HOM05D006334 ORTHO05D008320 1.1e-45 188.0 178 69.1
Nitab4.5_0002342g0070 Nicotiana tabacum HOM05D006334 ORTHO05D008320 1.1e-45 188.0 172 67.4
Duzib268G1565 Durio zibethinus HOM05D006334 ORTHO05D008320 1.5e-45 187.6 135 69.6
SMO143G0307 Selaginella moellendorffii HOM05D006334 ORTHO05D008320 1.5e-45 187.6 120 75.8
TWI38G1766 Tripterygium wilfordii HOM05D006334 ORTHO05D008320 1.5e-45 187.6 297 56.9
MSTRG.27096 Avicennia marina HOM05D006334 ORTHO05D008320 1.9e-45 187.2 132 71.2
BcaNung03057 Brassica carinata HOM05D006334 ORTHO05D008320 1.9e-45 187.2 134 70.1
COL.COLO4_09585 Corchorus olitorius HOM05D006334 ORTHO05D008320 1.9e-45 187.2 178 68.5
SEGI_34639 Sequoiadendron giganteum HOM05D006334 ORTHO05D008320 1.9e-45 187.2 213 62.0
Haze_09629 Corylus avellana HOM05D006334 ORTHO05D008320 2.5e-45 186.8 295 54.9
FAN11G3716 Fragaria x ananassa HOM05D006334 ORTHO05D008320 2.5e-45 186.8 295 51.5
Thecc.07G050800 Theobroma cacao HOM05D006334 ORTHO05D008320 2.5e-45 186.8 178 68.0
Aa31LG5G10300 Aethionema arabicum HOM05D006334 ORTHO05D008320 3.3e-45 186.4 179 67.0
C01p23260 Brassica napus HOM05D006334 ORTHO05D008320 3.3e-45 186.4 134 70.1
Lj8A166G85 Lonicera japonica HOM05D006334 ORTHO05D008320 3.3e-45 186.4 177 68.9
BcaC06g32710 Brassica carinata HOM05D006334 ORTHO05D008320 4.3e-45 186.0 135 69.6
C07p54970 Brassica napus HOM05D006334 ORTHO05D008320 4.3e-45 186.0 135 69.6
BolC1t02259H Brassica oleracea HOM05D006334 ORTHO05D008320 4.3e-45 186.0 134 70.1
BraA01t01781Z Brassica rapa HOM05D006334 ORTHO05D008320 4.3e-45 186.0 134 70.1
Migut.M01801 Erythranthe guttata HOM05D006334 ORTHO05D008320 4.3e-45 186.0 133 69.9
Gohir.D01G062800 Gossypium hirsutum HOM05D006334 ORTHO05D008320 4.3e-45 186.0 178 68.5
Lsat_1_v5_gn_7_109541 Lactuca sativa HOM05D006334 ORTHO05D008320 4.3e-45 186.0 303 57.1
PSO210G7302 Papaver somniferum HOM05D006334 ORTHO05D008320 4.3e-45 186.0 201 67.2
CARHR234770 Cardamine hirsuta HOM05D006334 ORTHO05D008320 5.6e-45 185.7 179 68.7
Prupe.4G205200 Prunus persica HOM05D006334 ORTHO05D008320 7.3e-45 185.3 296 58.4
MD03G1210000 Malus domestica HOM05D006334 ORTHO05D008320 9.6e-45 184.9 295 51.2
PGR031G1291 Punica granatum HOM05D006334 ORTHO05D008320 1.2e-44 184.5 133 70.7
A03p57090 Brassica napus HOM05D006334 ORTHO05D008320 1.6e-44 184.1 135 68.9
BraA03t14779Z Brassica rapa HOM05D006334 ORTHO05D008320 1.6e-44 184.1 135 68.9
FvH4_3g21950 Fragaria vesca HOM05D006334 ORTHO05D008320 1.6e-44 184.1 295 49.8
Nn1g07058 Nelumbo nucifera HOM05D006334 ORTHO05D008320 1.6e-44 184.1 178 68.5
AL7G25680 Arabidopsis lyrata HOM05D006334 ORTHO05D008320 2.1e-44 183.7 179 67.6
PSO832G3755 Papaver somniferum HOM05D006334 ORTHO05D008320 2.1e-44 183.7 201 66.7
Peaxi162Scf00407g00312 Petunia axillaris HOM05D006334 ORTHO05D008320 2.1e-44 183.7 132 72.0
SGA_v2.0_scaffold101G29789 Striga asiatica HOM05D006334 ORTHO05D008320 2.1e-44 183.7 134 68.7
Thhalv10025846m.g Eutrema salsugineum HOM05D006334 ORTHO05D008320 2.8e-44 183.3 134 69.4
MBI02_g23962_MAGBIO Magnolia biondii HOM05D006334 ORTHO05D008320 2.8e-44 183.3 294 55.8
MD11G1224700 Malus domestica HOM05D006334 ORTHO05D008320 2.8e-44 183.3 282 58.2
BolC7t46013H Brassica oleracea HOM05D006334 ORTHO05D001501 4.7e-44 182.6 120 74.2
Carub.0007s1372 Capsella rubella HOM05D006334 ORTHO05D008320 4.7e-44 182.6 179 67.0
Sabra16G0284400 Salix brachista HOM05D006334 ORTHO05D008320 4.7e-44 182.6 133 70.7
Sp7g25090 Schrenkiella parvula HOM05D006334 ORTHO05D008320 4.7e-44 182.6 119 74.8
ECA236G0521 Erigeron canadensis HOM05D006334 ORTHO05D008320 8.1e-44 181.8 296 54.7
AT4G27120 Arabidopsis thaliana HOM05D006334 ORTHO05D008320 1.1e-43 181.4 179 66.5
A01p18260 Brassica napus HOM05D006334 ORTHO05D008320 1.1e-43 181.4 119 73.9
Carub.0008s0614 Capsella rubella HOM05D006334 ORTHO05D008320 1.8e-43 180.6 178 66.9
RhsimUnG0252800 Rhododendron simsii HOM05D006334 ORTHO05D008320 2.4e-43 180.3 239 58.2
Haze_24344 Corylus avellana HOM05D003220 ORTHO05D003944 3.1e-43 179.9 133 69.2
Atru.chr2.3229 Acer truncatum HOM05D006334 ORTHO05D008320 5.2e-43 179.1 296 51.4
Cc05_g13330 Coffea canephora HOM05D006334 ORTHO05D008320 5.2e-43 179.1 133 68.4
CsaV3_3G023200 Cucumis sativus L. HOM05D006334 ORTHO05D008320 6.9e-43 178.7 176 67.6
CsaV3_UNG104770 Cucumis sativus L. HOM05D006334 ORTHO05D008320 6.9e-43 178.7 176 67.6
MELO3C018091.2 Cucumis melo HOM05D006334 ORTHO05D008320 8.9e-43 178.3 188 63.8
Os07g0103200 Oryza sativa ssp. japonica HOM05D006334 ORTHO05D008320 8.9e-43 178.3 185 64.9
Peaxi162Scf00450g00858 Petunia axillaris HOM05D006334 ORTHO05D008320 8.9e-43 178.3 146 65.1
CBR_g8852 Chara braunii HOM05D006334 ORTHO05D008320 3.4e-42 176.4 223 53.8
THA.LOC104812531 Tarenaya hassleriana HOM05D006334 ORTHO05D008320 3.4e-42 176.4 282 58.2
ClCG05G014700 Citrullus lanatus HOM05D006334 ORTHO05D008320 9.9e-42 174.9 282 55.3
Sed0009538 Sechium edule HOM05D006334 ORTHO05D008320 2.2e-41 173.7 128 68.8
unitig_748.g7233 Utricularia gibba HOM05D006334 ORTHO05D008320 8.7e-38 161.8 120 70.8
EL10Ac4g07940 Beta vulgaris HOM05D006334 ORTHO05D008320 3.3e-37 159.8 307 56.7
Actinidia10714 Actinidia chinensis HOM05D006334 ORTHO05D008320 4.8e-36 156.0 112 71.4
Actinidia35324 Actinidia chinensis HOM05D006334 ORTHO05D008320 3.1e-35 153.3 134 70.1
FAN21G3458 Fragaria x ananassa HOM05D006334 ORTHO05D008320 3.7e-28 129.8 300 45.7
Cre02.g101100 Chlamydomonas reinhardtii HOM05D006334 ORTHO05D008320 1.4e-24 117.9 119 52.1
FAN16G1435 Fragaria x ananassa HOM05D006334 ORTHO05D008320 4.8e-20 102.8 66 77.3
Oeu032444.1 Olea europaea HOM05D006334 ORTHO05D008320 3.4e-18 96.7 106 61.3
Cpa.g.sc97.53 Carica papaya HOM05D006334 ORTHO05D008320 4.5e-18 96.3 66 72.7
Haze_27349 Corylus avellana HOM05D006334 ORTHO05D008320 4.5e-18 96.3 170 45.9
BcaC09g50615 Brassica carinata HOM05D006334 ORTHO05D008320 1.6e-12 77.8 56 66.1
Cpa.g.sc97.55 Carica papaya HOM05D006334 ORTHO05D008320 3.7e-12 76.6 101 62.4
ATR0697G296 Amborella trichopoda HOM05D006334 ORTHO05D008320 1.5e-10 71.2 223 39.5


User provided reference genes

Program Settings