Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_18430 Physcomitrium patens HOM05D005923 ORTHO05D007376 4.5e-258 894.0 441 100.0
Pp3c8_13610 Physcomitrium patens HOM05D005923 ORTHO05D007376 4.2e-139 498.8 543 49.5
Pp3c23_21040 Physcomitrium patens HOM05D005923 ORTHO05D007376 9.6e-91 338.2 548 39.4
Mapoly0048s0028 Marchantia polymorpha HOM05D005923 ORTHO05D007376 4.2e-62 243.0 570 31.4
AagrBONN_evm.TU.Sc2ySwM_344.5471 Anthoceros agrestis HOM05D005923 ORTHO05D007376 9.6e-59 231.9 544 30.3
SMO228G0200 Selaginella moellendorffii HOM05D005923 ORTHO05D007376 1.1e-57 228.4 479 31.1
ATR0824G241 Amborella trichopoda HOM05D005923 ORTHO05D007376 4.8e-50 203.0 570 27.9
Glyma.09G248100 Glycine max HOM05D005923 ORTHO05D007376 4.1e-49 199.9 461 32.3
PSO675G7036 Papaver somniferum HOM05D005923 ORTHO05D007376 3.4e-48 196.8 463 31.5
Actinidia06787 Actinidia chinensis HOM05D005923 ORTHO05D007376 7.7e-48 195.7 453 31.8
arahy.Tifrunner.gnm1.ann1.51VLQD Arachis hypogaea HOM05D005923 ORTHO05D007376 7.7e-48 195.7 565 29.6
PSO732G0688 Papaver somniferum HOM05D005923 ORTHO05D007376 1.3e-47 194.9 463 31.7
Ciclev10011172m.g Citrus clementina HOM05D005923 ORTHO05D007376 2.9e-47 193.7 457 30.6
Lalb_Chr03g0038141 Lupinus albus HOM05D005923 ORTHO05D007376 2.5e-46 190.7 561 29.9
arahy.Tifrunner.gnm1.ann1.VQ08NH Arachis hypogaea HOM05D005923 ORTHO05D007376 7.2e-46 189.1 470 31.5
Hund21927 Selenicereus undatus HOM05D005923 ORTHO05D007376 1.2e-45 188.3 450 30.2
Aa31LG5G13800 Aethionema arabicum HOM05D005923 ORTHO05D000304 1.6e-45 188.0 466 28.8
Ah.04g159240 Amaranthus hybridus HOM05D005923 ORTHO05D007376 2.1e-45 187.6 487 30.6
Carub.0003s0247 Capsella rubella HOM05D005923 ORTHO05D007376 2.1e-45 187.6 470 28.7
EL10Ac4g10017 Beta vulgaris HOM05D005923 ORTHO05D007376 2.7e-45 187.2 491 30.3
Glyma.18G244700 Glycine max HOM05D005923 ORTHO05D007376 2.7e-45 187.2 468 31.2
TWI18G0568 Tripterygium wilfordii HOM05D005923 ORTHO05D007376 3.6e-45 186.8 471 31.6
Haze_04596 Corylus avellana HOM05D005923 ORTHO05D007376 4.6e-45 186.4 490 30.8
AUR62014468 Chenopodium quinoa HOM05D005923 ORTHO05D007376 6.1e-45 186.0 489 30.5
AT3G03305 Arabidopsis thaliana HOM05D005923 ORTHO05D007376 7.9e-45 185.7 500 28.6
CANSAT21G0310 Cannabis sativa HOM05D005923 ORTHO05D007376 1.0e-44 185.3 458 29.0
Phvul.008G051900 Phaseolus vulgaris HOM05D005923 ORTHO05D007376 1.4e-44 184.9 562 29.0
QL10p015972 Quercus lobata HOM05D005923 ORTHO05D007376 1.4e-44 184.9 465 30.5
VMungo1383G0851 Vigna mungo HOM05D005923 ORTHO05D007376 1.4e-44 184.9 561 29.4
THA.LOC104827232 Tarenaya hassleriana HOM05D005923 ORTHO05D007376 1.8e-44 184.5 487 28.7
Potri.010G180800 Populus trichocarpa HOM05D005923 ORTHO05D007376 3.0e-44 183.7 502 29.1
Duzib128G1624 Durio zibethinus HOM05D005923 ORTHO05D007376 3.9e-44 183.3 465 30.1
Lj1g0007040 Lotus japonicus HOM05D005923 ORTHO05D007376 5.1e-44 183.0 474 30.8
AL3G12930 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 6.7e-44 182.6 500 28.0
Cfa006234 Carpinus fangiana HOM05D005923 ORTHO05D007376 6.7e-44 182.6 490 30.6
AUR62034530 Chenopodium quinoa HOM05D005923 ORTHO05D007376 6.7e-44 182.6 490 30.0
GSVIVG01003759001 Vitis vinifera HOM05D005923 ORTHO05D007376 6.7e-44 182.6 455 30.8
Prupe.6G364500 Prunus persica HOM05D005923 ORTHO05D007376 8.8e-44 182.2 560 29.3
Thhalv10020144m.g Eutrema salsugineum HOM05D005923 ORTHO05D007376 1.1e-43 181.8 500 28.2
CARHR077340 Cardamine hirsuta HOM05D005923 ORTHO05D007376 1.5e-43 181.4 460 28.7
FvH4_6g00140 Fragaria vesca HOM05D005923 ORTHO05D007376 1.5e-43 181.4 470 30.2
MBI08_g20603_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 1.5e-43 181.4 502 31.1
HPP92_013562 Vanilla planifolia HOM05D005923 ORTHO05D007376 1.5e-43 181.4 505 30.3
COL.COLO4_36605 Corchorus olitorius HOM05D005923 ORTHO05D007376 2.0e-43 181.0 466 30.9
CSS0002064 Camellia sinensis var. sinensis HOM05D005923 ORTHO05D007376 2.5e-43 180.6 468 29.1
Nitab4.5_0009631g0020 Nicotiana tabacum HOM05D005923 ORTHO05D007376 2.5e-43 180.6 393 32.3
ATR0564G177 Amborella trichopoda HOM05D005923 ORTHO05D007376 3.3e-43 180.3 493 30.6
Medtr7g080490 Medicago truncatula HOM05D005923 ORTHO05D007376 4.3e-43 179.9 457 31.1
CAN.G321.22 Capsicum annuum HOM05D005923 ORTHO05D007376 5.7e-43 179.5 463 28.7
PGSC0003DMG400016251 Solanum tuberosum HOM05D005923 ORTHO05D007376 5.7e-43 179.5 463 29.2
Ca_08014_v3 Cicer arietinum L. HOM05D005923 ORTHO05D007376 1.3e-42 178.3 459 30.3
Aqoxy2G04094 Aquilegia oxysepala HOM05D005923 ORTHO05D007376 2.2e-42 177.6 483 28.8
DCAR_031594 Daucus carota HOM05D005923 ORTHO05D007376 2.2e-42 177.6 491 31.4
Os01g0894000 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 2.2e-42 177.6 505 28.7
Eucgr.B01459 Eucalyptus grandis HOM05D005923 ORTHO05D007376 2.8e-42 177.2 491 29.1
Sp3g02330 Schrenkiella parvula HOM05D005923 ORTHO05D007376 2.8e-42 177.2 500 27.6
Cpa.g.sc99.42 Carica papaya HOM05D005923 ORTHO05D007376 4.8e-42 176.4 484 29.5
Sabra10G0138600 Salix brachista HOM05D005923 ORTHO05D007376 4.8e-42 176.4 514 28.2
C05p63470 Brassica napus HOM05D005923 ORTHO05D007376 6.3e-42 176.0 492 28.7
BolC5t35012H Brassica oleracea HOM05D005923 ORTHO05D007376 6.3e-42 176.0 492 28.7
Gohir.A02G106500 Gossypium hirsutum HOM05D005923 ORTHO05D007376 6.3e-42 176.0 463 30.9
MD12G1262500 Malus domestica HOM05D005923 ORTHO05D007376 6.3e-42 176.0 484 28.9
Psat3g105160 Pisum sativum HOM05D005923 ORTHO05D007376 6.3e-42 176.0 461 29.7
Nitab4.5_0001003g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 8.2e-42 175.6 486 29.2
Dinv21358 Davidia involucrata HOM05D005923 ORTHO05D007376 1.1e-41 175.3 487 29.4
Sc16g0010600 Simmondsia chinensis HOM05D005923 ORTHO05D007376 1.1e-41 175.3 482 27.6
PGR031G2609 Punica granatum HOM05D005923 ORTHO05D007376 1.4e-41 174.9 458 29.0
Sopen11g004360 Solanum pennellii HOM05D005923 ORTHO05D007376 1.4e-41 174.9 459 29.0
Cc09_g04040 Coffea canephora HOM05D005923 ORTHO05D007376 1.8e-41 174.5 452 31.0
Atru.chr12.1669 Acer truncatum HOM05D005923 ORTHO05D007376 2.4e-41 174.1 561 28.0
A05p43880 Brassica napus HOM05D005923 ORTHO05D007376 2.4e-41 174.1 489 28.0
SalBow1G1244 Salvia bowleyana HOM05D005923 ORTHO05D007376 2.4e-41 174.1 495 27.5
Sed0021637 Sechium edule HOM05D005923 ORTHO05D007376 2.4e-41 174.1 472 29.2
Zm00001eb144980 Zea mays HOM05D005923 ORTHO05D007376 2.4e-41 174.1 504 28.6
RcHm_v2.0_Chr3g0447491 Rosa chinensis HOM05D005923 ORTHO05D007376 3.1e-41 173.7 483 28.6
Gohir.D03G071400 Gossypium hirsutum HOM05D005923 ORTHO05D007376 4.1e-41 173.3 463 30.7
Gorai.003G088600 Gossypium raimondii HOM05D005923 ORTHO05D007376 4.1e-41 173.3 463 30.7
MBI12_g21502_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 4.1e-41 173.3 546 26.0
TPR.G31231 Trifolium pratense HOM05D005923 ORTHO05D007376 4.1e-41 173.3 560 28.2
TAR365G1048 Trochodendron aralioides HOM05D005923 ORTHO05D007376 4.1e-41 173.3 465 29.2
BraA05t23125Z Brassica rapa HOM05D005923 ORTHO05D007376 5.3e-41 172.9 489 27.8
HanXRQChr10g0283011 Helianthus annuus HOM05D005923 ORTHO05D007376 5.3e-41 172.9 452 28.3
SalBow1G7804 Salvia bowleyana HOM05D005923 ORTHO05D007376 6.9e-41 172.6 495 27.3
HPP92_028167 Vanilla planifolia HOM05D005923 ORTHO05D007376 6.9e-41 172.6 447 28.9
Manes.12G002100 Manihot esculenta HOM05D005923 ORTHO05D007376 9.1e-41 172.2 460 29.1
Actinidia03247 Actinidia chinensis HOM05D005923 ORTHO05D007376 1.2e-40 171.8 331 36.3
Oeu034703.2 Olea europaea HOM05D005923 ORTHO05D007376 1.5e-40 171.4 484 28.7
Potri.008G077000 Populus trichocarpa HOM05D005923 ORTHO05D007376 1.5e-40 171.4 495 27.7
Migut.F02096 Erythranthe guttata HOM05D005923 ORTHO05D007376 2.0e-40 171.0 483 28.4
CiPaw.07G083600 Carya illinoinensis HOM05D005923 ORTHO05D007376 2.6e-40 170.6 404 30.4
SGA_v2.0_scaffold62G21491 Striga asiatica HOM05D005923 ORTHO05D007376 3.4e-40 170.2 456 29.8
ClCG11G012400 Citrullus lanatus HOM05D005923 ORTHO05D007376 4.5e-40 169.9 295 38.0
CsaV3_2G010290 Cucumis sativus L. HOM05D005923 ORTHO05D007376 4.5e-40 169.9 405 31.6
ECA232G3428 Erigeron canadensis HOM05D005923 ORTHO05D007376 7.7e-40 169.1 469 28.4
Os07g0274100 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 7.7e-40 169.1 477 27.9
Peaxi162Scf00296g01112 Petunia axillaris HOM05D005923 ORTHO05D007376 1.7e-39 167.9 485 28.5
MSTRG.27409 Avicennia marina HOM05D005923 ORTHO05D007376 6.5e-39 166.0 472 26.9
Ah.06g195310 Amaranthus hybridus HOM05D005923 ORTHO05D007376 1.1e-38 165.2 387 31.8
Rhsim05G0165000 Rhododendron simsii HOM05D005923 ORTHO05D007376 1.1e-38 165.2 505 27.9
CDE09G0389 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 1.9e-38 164.5 323 33.7
Lsat_1_v5_gn_0_14641 Lactuca sativa HOM05D005923 ORTHO05D007376 2.5e-38 164.1 457 27.4
Sabra08G0057400 Salix brachista HOM05D005923 ORTHO05D007376 7.2e-38 162.5 495 27.1
unitig_46.g18570 Utricularia gibba HOM05D005923 ORTHO05D007376 1.2e-37 161.8 399 29.8
Thecc.05G188500 Theobroma cacao HOM05D005923 ORTHO05D007376 2.7e-37 160.6 333 33.9
CDE06G0114 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 1.0e-36 158.7 265 35.5
MELO3C008611.2 Cucumis melo HOM05D005923 ORTHO05D007376 1.7e-34 151.4 212 40.1
Zm00001eb398210 Zea mays HOM05D005923 ORTHO05D007376 2.2e-34 151.0 263 35.0
Solyc11g008570.2 Solanum lycopersicum HOM05D005923 ORTHO05D007376 1.2e-32 145.2 458 26.9
BcaC05g30305 Brassica carinata HOM05D000399 ORTHO05D000304 3.6e-29 133.7 410 28.8
arahy.Tifrunner.gnm1.ann1.25XALN Arachis hypogaea HOM05D005923 ORTHO05D007376 1.4e-28 131.7 156 43.6
Actinidia06786 Actinidia chinensis HOM05D005923 ORTHO05D007376 1.1e-27 128.6 208 41.3
MD04G1248100 Malus domestica HOM05D005923 ORTHO05D007376 7.0e-25 119.4 226 30.5
Lj8A198T52 Lonicera japonica HOM05D005923 ORTHO05D007376 1.5e-22 111.7 424 25.2
Atru.chr12.1657 Acer truncatum HOM05D005923 ORTHO05D007376 1.8e-20 104.8 292 29.8
Atru.chr12.1695 Acer truncatum HOM05D005923 ORTHO05D007376 1.0e-15 89.0 141 39.0


User provided reference genes

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