Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_18220 Physcomitrium patens HOM05D019864 ORTHO05D026703 4.3e-56 221.1 111 100.0
Pp3c8_6460 Physcomitrium patens HOM05D019864 ORTHO05D026703 6.9e-22 107.5 96 53.1
Pp3c8_6461 Physcomitrium patens HOM05D019864 ORTHO05D026703 6.9e-22 107.5 96 53.1
TAR627G0109 Trochodendron aralioides HOM05D001848 ORTHO05D001295 2.3e-09 65.9 80 38.8
TAR627G0750 Trochodendron aralioides HOM05D001848 ORTHO05D001295 2.3e-09 65.9 80 38.8
CiPaw.11G196700 Carya illinoinensis HOM05D001848 ORTHO05D001295 5.1e-09 64.7 80 36.2
Nitab4.5_0001160g0120 Nicotiana tabacum HOM05D001848 ORTHO05D001295 5.1e-09 64.7 81 37.0
Nitab4.5_0004362g0040 Nicotiana tabacum HOM05D001848 ORTHO05D001295 5.1e-09 64.7 82 36.6
Mapoly0188s0009 Marchantia polymorpha HOM05D012754 ORTHO05D015707 8.8e-09 63.9 59 54.2
Sopen07g033320 Solanum pennellii HOM05D001848 ORTHO05D001295 1.1e-08 63.5 82 35.4
Solyc07g065110.1 Solanum lycopersicum HOM05D001848 ORTHO05D001295 2.5e-08 62.4 82 34.1
Sc17g0001760 Simmondsia chinensis HOM05D001848 ORTHO05D001295 4.3e-08 61.6 86 37.2
Pp3c12_9030 Physcomitrium patens HOM05D019864 ORTHO05D001295 5.7e-08 61.2 101 32.7
PGR031G3783 Punica granatum HOM05D001848 ORTHO05D001295 7.4e-08 60.8 74 39.2
Cpa.g.sc12.222 Carica papaya HOM05D001848 ORTHO05D001295 9.7e-08 60.5 82 36.6
TAR626G1904 Trochodendron aralioides HOM05D001848 ORTHO05D001295 9.7e-08 60.5 66 39.4
Gohir.A04G010600 Gossypium hirsutum HOM05D001848 ORTHO05D001295 2.8e-07 58.9 91 33.0
Carub.0008s1575 Capsella rubella HOM05D008197 ORTHO05D001295 3.7e-07 58.5 87 29.9
Medtr3g055250 Medicago truncatula HOM05D001848 ORTHO05D001295 3.7e-07 58.5 86 32.6
Pp3c11_7360 Physcomitrium patens HOM05D012754 ORTHO05D015707 3.7e-07 58.5 90 33.3
Pp3c11_7470 Physcomitrium patens HOM05D012754 ORTHO05D015707 3.7e-07 58.5 90 33.3
Pp3c11_7520 Physcomitrium patens HOM05D012754 ORTHO05D015707 3.7e-07 58.5 90 33.3
Pp3c11_7530 Physcomitrium patens HOM05D012754 ORTHO05D015707 3.7e-07 58.5 90 33.3
Pp3c11_7600 Physcomitrium patens HOM05D012754 ORTHO05D015707 3.7e-07 58.5 90 33.3
Pp3c11_7660 Physcomitrium patens HOM05D012754 ORTHO05D015707 3.7e-07 58.5 90 33.3
Pp3c11_7710 Physcomitrium patens HOM05D012754 ORTHO05D015707 3.7e-07 58.5 90 33.3
Sc17g0001740 Simmondsia chinensis HOM05D001848 ORTHO05D001295 3.7e-07 58.5 86 37.2
Ciclev10010463m.g Citrus clementina HOM05D001848 ORTHO05D001295 4.8e-07 58.2 64 40.6
Glyma.10G297600 Glycine max HOM05D001848 ORTHO05D001295 4.8e-07 58.2 85 34.1
Pp3c2_19110 Physcomitrium patens HOM05D012754 ORTHO05D015707 4.8e-07 58.2 90 33.3
C03p16510 Brassica napus HOM05D008197 ORTHO05D001295 6.3e-07 57.8 91 34.1
BolC3t14070H Brassica oleracea HOM05D008197 ORTHO05D001295 6.3e-07 57.8 91 34.1
Gohir.A01G085500 Gossypium hirsutum HOM05D001848 ORTHO05D001295 6.3e-07 57.8 78 35.9
Gohir.D01G071850 Gossypium hirsutum HOM05D001848 ORTHO05D001295 6.3e-07 57.8 78 35.9
Gorai.002G094700 Gossypium raimondii HOM05D001848 ORTHO05D001295 6.3e-07 57.8 78 35.9
Pp3c11_12520 Physcomitrium patens HOM05D012754 ORTHO05D015707 6.3e-07 57.8 90 32.2
Mapoly0120s0024 Marchantia polymorpha HOM05D012754 ORTHO05D015707 8.2e-07 57.4 93 38.7
Oeu019626.1 Olea europaea HOM05D001848 ORTHO05D001295 8.2e-07 57.4 96 33.3
BcaB01g04342 Brassica carinata HOM05D008197 ORTHO05D001295 1.1e-06 57.0 91 33.0
ECA236G2606 Erigeron canadensis HOM05D001848 ORTHO05D001295 1.1e-06 57.0 78 33.3
Glyma.18G191600 Glycine max HOM05D001848 ORTHO05D001295 1.1e-06 57.0 81 35.8
Lsat_1_v5_gn_7_113461 Lactuca sativa HOM05D001848 ORTHO05D001295 1.1e-06 57.0 87 33.3
MBI07_g13964_MAGBIO Magnolia biondii HOM05D001848 ORTHO05D001295 1.1e-06 57.0 88 34.1
AUR62028704 Chenopodium quinoa HOM05D001848 ORTHO05D001295 1.4e-06 56.6 66 39.4
DCAR_021416 Daucus carota HOM05D001848 ORTHO05D001295 1.8e-06 56.2 93 34.4
Gohir.D05G377400 Gossypium hirsutum HOM05D001848 ORTHO05D001295 1.8e-06 56.2 91 31.9
Gorai.009G445200 Gossypium raimondii HOM05D001848 ORTHO05D001295 1.8e-06 56.2 91 31.9
Nn1g07396 Nelumbo nucifera HOM05D001848 ORTHO05D001295 1.8e-06 56.2 80 32.5
Sc17g0001710 Simmondsia chinensis HOM05D001848 ORTHO05D001295 1.8e-06 56.2 94 34.0
PGSC0003DMG400022295 Solanum tuberosum HOM05D001848 ORTHO05D001295 1.8e-06 56.2 82 32.9
Lalb_Chr01g0002711 Lupinus albus HOM05D001848 ORTHO05D001295 2.4e-06 55.8 87 34.5
BcaC07g41668 Brassica carinata HOM05D008197 ORTHO05D001295 3.1e-06 55.5 64 37.5
BraA02t06032Z Brassica rapa HOM05D008197 ORTHO05D001295 3.1e-06 55.5 90 31.1
TPR.G30652 Trifolium pratense HOM05D001848 ORTHO05D001295 3.1e-06 55.5 87 33.3
A03p14070 Brassica napus HOM05D008197 ORTHO05D001295 4.1e-06 55.1 91 33.0
BraA03t10707Z Brassica rapa HOM05D008197 ORTHO05D001295 4.1e-06 55.1 91 33.0
DCAR_021418 Daucus carota HOM05D001848 ORTHO05D001295 4.1e-06 55.1 92 33.7
AagrBONN_evm.TU.Sc2ySwM_228.492 Anthoceros agrestis HOM05D019864 ORTHO05D026703 5.3e-06 54.7 82 37.8
Glyma.07G141500 Glycine max HOM05D001848 ORTHO05D001295 5.3e-06 54.7 82 32.9
QL09p046203 Quercus lobata HOM05D001848 ORTHO05D001295 5.3e-06 54.7 86 33.7
C02p16150 Brassica napus HOM05D008197 ORTHO05D001295 6.9e-06 54.3 85 30.6
BolC2t07720H Brassica oleracea HOM05D008197 ORTHO05D001295 6.9e-06 54.3 85 30.6
DCAR_013205 Daucus carota HOM05D001848 ORTHO05D001295 6.9e-06 54.3 80 32.5
Glyma.18G191800 Glycine max HOM05D001848 ORTHO05D001295 6.9e-06 54.3 81 33.3
BcaB01g04341 Brassica carinata HOM05D008197 ORTHO05D001295 9.1e-06 53.9 84 32.1
CARHR268750 Cardamine hirsuta HOM05D008197 ORTHO05D001295 9.1e-06 53.9 95 28.4
Eucgr.F03514 Eucalyptus grandis HOM05D001848 ORTHO05D001295 9.1e-06 53.9 83 33.7
LjContig00272g0023351 Lotus japonicus HOM05D001848 ORTHO05D001295 9.1e-06 53.9 87 32.2
MBI16_g31711_MAGBIO Magnolia biondii HOM05D001848 ORTHO05D001295 9.1e-06 53.9 83 31.3


User provided reference genes

Program Settings