Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 2.2e-42 175.3 90 100.0
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 5.1e-23 110.9 84 65.5
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 7.3e-22 107.1 75 68.0
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 7.3e-22 107.1 81 63.0
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 9.5e-22 106.7 88 61.4
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 1.6e-21 105.9 84 60.7
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 1.6e-21 105.9 81 61.7
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 1.6e-21 105.9 76 65.8
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.6e-21 105.9 81 63.0
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 2.1e-21 105.5 81 63.0
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 2.8e-21 105.1 85 61.2
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 3.6e-21 104.8 85 60.0
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 3.6e-21 104.8 84 61.9
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 3.6e-21 104.8 77 64.9
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 3.6e-21 104.8 81 63.0
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 4.7e-21 104.4 87 60.9
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 4.7e-21 104.4 81 61.7
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 4.7e-21 104.4 85 60.0
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 4.7e-21 104.4 77 63.6
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 4.7e-21 104.4 85 60.0
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 4.7e-21 104.4 85 60.0
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 4.7e-21 104.4 77 63.6
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 6.2e-21 104.0 81 63.0
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 8.1e-21 103.6 77 63.6
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 8.1e-21 103.6 81 60.5
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 8.1e-21 103.6 81 61.7
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 8.1e-21 103.6 81 60.5
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 1.1e-20 103.2 84 61.9
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 1.1e-20 103.2 85 58.8
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 1.1e-20 103.2 88 58.0
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 1.1e-20 103.2 81 61.7
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 1.1e-20 103.2 81 61.7
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 1.1e-20 103.2 81 60.5
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.1e-20 103.2 81 59.3
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 1.1e-20 103.2 90 57.8
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 1.1e-20 103.2 81 60.5
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 1.1e-20 103.2 84 58.3
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 1.1e-20 103.2 84 59.5
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 1.1e-20 103.2 81 61.7
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 1.4e-20 102.8 84 59.5
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 1.4e-20 102.8 81 61.7
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 1.8e-20 102.4 88 59.1
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 1.8e-20 102.4 77 62.3
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 1.8e-20 102.4 77 62.3
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 1.8e-20 102.4 84 59.5
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.4e-20 102.1 81 60.5
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 3.1e-20 101.7 81 61.7
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 4.0e-20 101.3 81 60.5
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 4.0e-20 101.3 81 60.5
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 4.0e-20 101.3 81 60.5
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 4.0e-20 101.3 81 59.3
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 4.0e-20 101.3 88 56.8
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 4.0e-20 101.3 88 55.7
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 5.2e-20 100.9 81 60.5
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 6.8e-20 100.5 81 60.5
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 8.9e-20 100.1 81 56.8
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 8.9e-20 100.1 81 56.8
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 8.9e-20 100.1 81 56.8
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 1.2e-19 99.8 80 60.0
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 1.2e-19 99.8 81 58.0
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 1.2e-19 99.8 89 55.1
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 1.2e-19 99.8 81 59.3
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 1.5e-19 99.4 84 58.3
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.5e-19 99.4 81 59.3
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 1.5e-19 99.4 81 60.5
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 2.0e-19 99.0 84 56.0
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 2.0e-19 99.0 84 56.0
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 2.6e-19 98.6 88 54.5
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 3.4e-19 98.2 81 58.0
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 3.4e-19 98.2 81 58.0
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 3.4e-19 98.2 88 54.5
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 3.4e-19 98.2 88 54.5
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 3.4e-19 98.2 88 54.5
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 3.4e-19 98.2 84 59.5
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 4.4e-19 97.8 80 58.8
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 7.6e-19 97.1 81 56.8
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 7.6e-19 97.1 84 58.3
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 9.9e-19 96.7 84 57.1
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 9.9e-19 96.7 88 54.5
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 2.2e-18 95.5 84 56.0
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 2.2e-18 95.5 81 58.0
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 2.9e-18 95.1 84 57.1
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 3.8e-18 94.7 84 56.0
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 1.4e-17 92.8 71 62.0
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 4.2e-17 91.3 72 59.7
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 7.1e-17 90.5 68 63.2
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.2e-16 89.7 99 48.5
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 1.6e-16 89.4 69 60.9
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 2.7e-16 88.6 65 63.1
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 3.5e-16 88.2 63 66.7
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 3.5e-16 88.2 72 56.9
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 1.0e-15 86.7 65 63.1
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 3.0e-15 85.1 68 57.4
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 3.0e-15 85.1 58 65.5
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 5.1e-15 84.3 100 45.0
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 8.7e-15 83.6 69 56.5
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 8.7e-15 83.6 69 56.5
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 8.7e-15 83.6 62 59.7
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 8.7e-15 83.6 58 63.8
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 3.3e-14 81.6 67 59.7
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 3.3e-14 81.6 66 62.1
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 3.3e-14 81.6 68 58.8
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 7.3e-14 80.5 58 62.1
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 1.2e-13 79.7 58 62.1
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 2.1e-13 79.0 67 55.2
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 4.0e-12 74.7 58 55.2
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 1.2e-08 63.2 45 60.0
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 6.0e-08 60.8 75 42.7
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 6.6e-07 57.4 68 39.7
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 6.6e-07 57.4 55 50.9


User provided reference genes

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