Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_17000 Physcomitrium patens HOM05D005283 ORTHO05D006769 1.3e-207 726.1 361 100.0
Pp3c5_16090 Physcomitrium patens HOM05D005283 ORTHO05D006769 3.5e-184 648.3 372 89.0
Pp3c6_10590 Physcomitrium patens HOM05D005283 ORTHO05D006769 1.0e-154 550.4 373 75.9
Pp3c16_9230 Physcomitrium patens HOM05D005283 ORTHO05D006769 4.9e-101 372.1 324 61.7
Ciclev10004285m.g Citrus clementina HOM05D005283 ORTHO05D006769 2.3e-82 310.1 370 49.7
Nn3g21453 Nelumbo nucifera HOM05D005283 ORTHO05D006769 6.6e-82 308.5 380 50.3
Aqoxy2G02976 Aquilegia oxysepala HOM05D005283 ORTHO05D006769 1.5e-81 307.4 370 49.5
MBI18_g13696_MAGBIO Magnolia biondii HOM05D005283 ORTHO05D006769 5.6e-81 305.4 376 48.7
CANSAT78G0446 Cannabis sativa HOM05D005283 ORTHO05D006769 7.3e-81 305.1 375 48.8
vmacro08159 Vaccinium macrocarpon HOM05D005283 ORTHO05D006769 7.3e-81 305.1 374 49.2
CSS0043341 Camellia sinensis var. sinensis HOM05D005283 ORTHO05D006769 9.6e-81 304.7 369 48.8
FAN12G0573 Fragaria x ananassa HOM05D005283 ORTHO05D006769 1.6e-80 303.9 370 48.1
FAN12G1245 Fragaria x ananassa HOM05D005283 ORTHO05D006769 1.6e-80 303.9 370 48.1
Atru.chr4.2851 Acer truncatum HOM05D005283 ORTHO05D006769 2.1e-80 303.5 373 48.8
Atru.BG.90.p Acer truncatum HOM05D005283 ORTHO05D006769 2.8e-80 303.1 372 48.7
PGR031G1610 Punica granatum HOM05D005283 ORTHO05D006769 4.8e-80 302.4 378 48.9
RcHm_v2.0_Chr4g0422381 Rosa chinensis HOM05D005283 ORTHO05D006769 8.1e-80 301.6 370 48.6
QL06p009017 Quercus lobata HOM05D005283 ORTHO05D006769 1.8e-79 300.4 369 47.7
FvH4_4g18240 Fragaria vesca HOM05D005283 ORTHO05D006769 4.0e-79 299.3 370 47.8
Eucgr.B01324 Eucalyptus grandis HOM05D005283 ORTHO05D006769 5.3e-79 298.9 369 47.4
MD08G1066800 Malus domestica HOM05D005283 ORTHO05D006769 1.2e-78 297.7 366 48.4
PSO210G5109 Papaver somniferum HOM05D005283 ORTHO05D006769 1.2e-78 297.7 371 49.9
MD13G1167900 Malus domestica HOM05D005283 ORTHO05D006769 1.5e-78 297.4 366 48.1
MSTRG.3910 Avicennia marina HOM05D005283 ORTHO05D006769 3.4e-78 296.2 378 48.1
arahy.Tifrunner.gnm1.ann1.PZAP36 Arachis hypogaea HOM05D005283 ORTHO05D006769 5.8e-78 295.4 374 48.7
arahy.Tifrunner.gnm1.ann1.Z6JJZG Arachis hypogaea HOM05D005283 ORTHO05D006769 5.8e-78 295.4 374 48.7
Sed0007600 Sechium edule HOM05D005283 ORTHO05D006769 9.9e-78 294.7 362 47.8
Medtr4g119960 Medicago truncatula HOM05D005283 ORTHO05D006769 3.8e-77 292.7 370 48.4
PSO170G5664 Papaver somniferum HOM05D005283 ORTHO05D006769 3.8e-77 292.7 371 49.3
TPR.G3193 Trifolium pratense HOM05D005283 ORTHO05D006769 6.4e-77 292.0 369 46.9
Cc03_g01850 Coffea canephora HOM05D005283 ORTHO05D006769 1.1e-76 291.2 372 47.3
Prupe.1G135400 Prunus persica HOM05D005283 ORTHO05D006769 1.1e-76 291.2 367 48.8
Thecc.04G285400 Theobroma cacao HOM05D005283 ORTHO05D006769 1.1e-76 291.2 370 47.6
CAN.G185.38 Capsicum annuum HOM05D005283 ORTHO05D006769 1.4e-76 290.8 371 49.1
DCAR_027073 Daucus carota HOM05D005283 ORTHO05D006769 1.4e-76 290.8 374 46.5
Cfa015392 Carpinus fangiana HOM05D005283 ORTHO05D006769 3.2e-76 289.7 373 48.5
Duzib151G1199 Durio zibethinus HOM05D005283 ORTHO05D006769 4.2e-76 289.3 368 47.3
Lalb_Chr18g0051671 Lupinus albus HOM05D005283 ORTHO05D006769 4.2e-76 289.3 370 46.2
Sc25g0004780 Simmondsia chinensis HOM05D005283 ORTHO05D006769 4.2e-76 289.3 373 47.2
Actinidia40275 Actinidia chinensis HOM05D005283 ORTHO05D006769 7.1e-76 288.5 370 47.6
Sabra10G0008900 Salix brachista HOM05D005283 ORTHO05D006769 7.1e-76 288.5 374 48.1
HanXRQChr13g0411191 Helianthus annuus HOM05D005283 ORTHO05D006769 9.3e-76 288.1 371 48.0
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 1.2e-75 287.7 370 47.6
Lsat_1_v5_gn_5_54040 Lactuca sativa HOM05D005283 ORTHO05D006769 2.7e-75 286.6 373 47.5
Potri.010G014000 Populus trichocarpa HOM05D005283 ORTHO05D006769 2.7e-75 286.6 369 47.2
ATR0796G268 Amborella trichopoda HOM05D005283 ORTHO05D006769 3.5e-75 286.2 378 47.9
CsaV3_3G014700 Cucumis sativus L. HOM05D005283 ORTHO05D006769 3.5e-75 286.2 382 47.9
Psat4g027360 Pisum sativum HOM05D005283 ORTHO05D006769 6.0e-75 285.4 368 47.0
Nitab4.5_0001120g0020 Nicotiana tabacum HOM05D005283 ORTHO05D006769 7.9e-75 285.0 373 47.5
Haze_01194 Corylus avellana HOM05D005283 ORTHO05D006769 1.3e-74 284.3 379 48.0
Glyma.07G247100 Glycine max HOM05D005283 ORTHO05D006769 2.3e-74 283.5 372 46.5
CiPaw.01G148000 Carya illinoinensis HOM05D005283 ORTHO05D006769 3.0e-74 283.1 370 46.8
Hma1.2p1_1185F.1_g265090 Hydrangea macrophylla HOM05D005283 ORTHO05D006769 3.0e-74 283.1 380 46.6
TAR362G0604 Trochodendron aralioides HOM05D005283 ORTHO05D006769 6.7e-74 282.0 415 43.6
ClCG05G006140 Citrullus lanatus HOM05D005283 ORTHO05D006769 1.9e-73 280.4 377 47.5
EL10Ac3g06605 Beta vulgaris HOM05D005283 ORTHO05D006769 3.3e-73 279.6 366 45.9
TWI09G0775 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 3.3e-73 279.6 369 46.3
Migut.G00154 Erythranthe guttata HOM05D005283 ORTHO05D006769 4.3e-73 279.3 370 47.3
Glyma.17G026900 Glycine max HOM05D005283 ORTHO05D006769 4.3e-73 279.3 374 46.3
Phvul.003G105900 Phaseolus vulgaris HOM05D005283 ORTHO05D006769 5.6e-73 278.9 378 46.3
Peaxi162Scf01123g00233 Petunia axillaris HOM05D005283 ORTHO05D006769 7.4e-73 278.5 370 47.6
Lj6A677G73 Lonicera japonica HOM05D005283 ORTHO05D006769 9.6e-73 278.1 381 46.7
Zm00001eb363540 Zea mays HOM05D005283 ORTHO05D006769 9.6e-73 278.1 368 46.2
Solyc01g080620.3 Solanum lycopersicum HOM05D005283 ORTHO05D006769 2.8e-72 276.6 371 47.7
AUR62041505 Chenopodium quinoa HOM05D005283 ORTHO05D006769 3.6e-72 276.2 373 45.8
Os01g0932600 Oryza sativa ssp. japonica HOM05D005283 ORTHO05D006769 4.8e-72 275.8 361 46.0
Rhsim04G0223000 Rhododendron simsii HOM05D005283 ORTHO05D006769 6.2e-72 275.4 428 42.1
Sopen01g032430 Solanum pennellii HOM05D005283 ORTHO05D006769 6.2e-72 275.4 372 47.6
Zm00001eb142310 Zea mays HOM05D005283 ORTHO05D006769 6.2e-72 275.4 374 45.7
Gohir.A02G049600 Gossypium hirsutum HOM05D005283 ORTHO05D006769 1.4e-71 274.2 375 45.9
Lj4g0026758 Lotus japonicus HOM05D005283 ORTHO05D006769 1.4e-71 274.2 373 45.3
TWI53G1858 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 1.4e-71 274.2 373 46.6
Ah.13g074630 Amaranthus hybridus HOM05D005283 ORTHO05D006769 4.0e-71 272.7 375 45.9
Gohir.D02G054700 Gossypium hirsutum HOM05D005283 ORTHO05D006769 4.0e-71 272.7 375 45.9
Gorai.005G060600 Gossypium raimondii HOM05D005283 ORTHO05D006769 4.0e-71 272.7 375 45.9
Nitab4.5_0000059g0420 Nicotiana tabacum HOM05D005283 ORTHO05D006769 5.3e-71 272.3 382 45.3
THA.LOC104820270 Tarenaya hassleriana HOM05D005283 ORTHO05D006769 5.3e-71 272.3 371 46.9
VMungo1215G0467 Vigna mungo HOM05D005283 ORTHO05D006769 1.5e-70 270.8 373 45.8
AT4G15840 Arabidopsis thaliana HOM05D005283 ORTHO05D006769 2.2e-69 266.9 379 43.5
COL.COLO4_13862 Corchorus olitorius HOM05D005283 ORTHO05D006769 1.4e-68 264.2 289 51.6
Dinv29746 Davidia involucrata HOM05D005283 ORTHO05D006769 2.4e-68 263.5 376 47.1
Carub.0007s2581 Capsella rubella HOM05D005283 ORTHO05D006769 4.2e-68 262.7 379 43.0
CARHR290370 Cardamine hirsuta HOM05D005283 ORTHO05D006769 7.1e-68 261.9 380 42.9
MELO3C006668.2 Cucumis melo HOM05D005283 ORTHO05D006769 9.3e-68 261.5 383 45.7
AL7G39450 Arabidopsis lyrata HOM05D005283 ORTHO05D006769 1.2e-67 261.2 369 44.4
Thhalv10024402m.g Eutrema salsugineum HOM05D005283 ORTHO05D006769 2.1e-67 260.4 379 43.3
CDE05G1280 Ceratophyllum demersum HOM05D005283 ORTHO05D006769 7.9e-67 258.5 369 44.4
BraA03t14037Z Brassica rapa HOM05D005283 ORTHO05D006769 1.8e-66 257.3 388 43.3
A03p49360 Brassica napus HOM05D005283 ORTHO05D006769 3.9e-66 256.1 388 42.5
BcaC06g33444 Brassica carinata HOM05D005283 ORTHO05D006769 1.1e-65 254.6 382 42.7
C07p47430 Brassica napus HOM05D005283 ORTHO05D006769 1.1e-65 254.6 382 42.7
BolC7t45270H Brassica oleracea HOM05D005283 ORTHO05D006769 1.1e-65 254.6 382 42.7
Sp7g14240 Schrenkiella parvula HOM05D005283 ORTHO05D006769 1.1e-65 254.6 381 42.5
BcaC06g32968 Brassica carinata HOM05D005283 ORTHO05D006769 2.5e-65 253.4 382 42.4
Dinv44377 Davidia involucrata HOM05D005283 ORTHO05D006769 1.1e-63 248.1 359 44.8
Oeu029706.1 Olea europaea HOM05D005283 ORTHO05D000116 3.1e-63 246.5 362 43.4
ECA240G0403 Erigeron canadensis HOM05D005283 ORTHO05D006769 3.8e-61 239.6 345 44.3
TAR633G1238 Trochodendron aralioides HOM05D005283 ORTHO05D006769 2.7e-59 233.4 151 73.5
GSVIVG01017731001 Vitis vinifera HOM05D005283 ORTHO05D006769 2.7e-59 233.4 164 68.9
CDE11G0961 Ceratophyllum demersum HOM05D005283 ORTHO05D006769 3.0e-58 229.9 201 56.7
Hma1.2p1_2906F.1_g330120 Hydrangea macrophylla HOM05D005283 ORTHO05D006769 9.6e-57 224.9 364 42.0
SGA_v2.0_scaffold18G08298 Striga asiatica HOM05D005283 ORTHO05D006769 3.7e-56 223.0 363 43.0
SEGI_08317 Sequoiadendron giganteum HOM05D005283 ORTHO05D006769 9.0e-55 218.4 137 76.6
HPP92_002144 Vanilla planifolia HOM05D005283 ORTHO05D006769 9.3e-52 208.4 155 67.1
FAN07G0879 Fragaria x ananassa HOM05D005283 ORTHO05D006769 4.6e-51 206.1 145 69.7
FAN17G2169 Fragaria x ananassa HOM05D005283 ORTHO05D006769 5.1e-50 202.6 432 34.5
Manes.03G195900 Manihot esculenta HOM05D005283 ORTHO05D006769 7.2e-44 182.2 327 41.0
Cpa.g.sc66.36 Carica papaya HOM05D005283 ORTHO05D006769 1.4e-39 167.9 377 35.3
PRCOL_00005501 Prasinoderma coloniale HOM05D005283 ORTHO05D006769 4.5e-38 162.9 170 52.4
Hund20553 Selenicereus undatus HOM05D005283 ORTHO05D006769 1.5e-33 147.9 282 36.9
SEGI_38162 Sequoiadendron giganteum HOM05D005283 ORTHO05D006769 1.5e-17 94.7 236 34.3
SEGI_40593 Sequoiadendron giganteum HOM05D005283 ORTHO05D006769 1.5e-17 94.7 236 34.3
BolC4t27184H Brassica oleracea HOM05D005283 ORTHO05D006769 9.8e-17 92.0 128 43.0
unitig_748.g8730 Utricularia gibba HOM05D005283 ORTHO05D006769 4.8e-16 89.7 256 31.2
HPP92_002145 Vanilla planifolia HOM05D005283 ORTHO05D006769 4.1e-15 86.7 234 34.2
A04p20740 Brassica napus HOM05D005283 ORTHO05D006769 1.3e-13 81.6 173 33.5
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 9.5e-12 75.5 52 71.2
BcaC05g28381 Brassica carinata HOM05D005283 ORTHO05D021637 1.4e-10 71.6 48 62.5
TAR633G2729 Trochodendron aralioides HOM05D005283 ORTHO05D006769 2.3e-10 70.9 190 34.2
C04p56580 Brassica napus HOM05D005283 ORTHO05D006769 2.8e-08 63.9 128 35.2
BcaC02g08264 Brassica carinata HOM05D005283 ORTHO05D006769 1.2e-06 58.5 115 33.9


User provided reference genes

Program Settings