Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_16050 Physcomitrium patens HOM05D005482 ORTHO05D006502 0.0e+00 1302.7 663 100.0
AagrBONN_evm.TU.Sc2ySwM_117.475 Anthoceros agrestis HOM05D005482 ORTHO05D006502 1.4e-56 225.3 649 30.5
Nitab4.5_0007769g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 6.7e-56 223.0 547 33.1
Nitab4.5_0000128g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 9.7e-55 219.2 543 32.2
PSO210G6830 Papaver somniferum HOM05D005482 ORTHO05D006502 5.3e-53 213.4 510 31.0
CAN.G581.10 Capsicum annuum HOM05D005482 ORTHO05D006502 9.1e-53 212.6 479 31.5
Cfa006872 Carpinus fangiana HOM05D005482 ORTHO05D006502 1.6e-52 211.8 532 31.2
COL.COLO4_27370 Corchorus olitorius HOM05D005482 ORTHO05D006502 1.6e-52 211.8 511 32.3
QL06p035944 Quercus lobata HOM05D005482 ORTHO05D006502 2.6e-52 211.1 635 29.0
MBI16_g31257_MAGBIO Magnolia biondii HOM05D005482 ORTHO05D006502 3.5e-52 210.7 619 28.9
PSO170G0154 Papaver somniferum HOM05D005482 ORTHO05D006502 3.5e-52 210.7 535 30.7
FAN28G0477 Fragaria x ananassa HOM05D005482 ORTHO05D006502 2.2e-51 208.0 554 29.8
Peaxi162Scf01142g00001 Petunia axillaris HOM05D005482 ORTHO05D006502 2.2e-51 208.0 537 34.5
Prupe.6G203300 Prunus persica HOM05D005482 ORTHO05D006502 2.2e-51 208.0 641 30.3
Solyc05g051370.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 2.2e-51 208.0 517 31.3
PGSC0003DMG400014586 Solanum tuberosum HOM05D005482 ORTHO05D006502 2.9e-51 207.6 509 32.2
Dinv36943 Davidia involucrata HOM05D005482 ORTHO05D006502 6.5e-51 206.5 629 30.2
Sopen05g029760 Solanum pennellii HOM05D005482 ORTHO05D006502 8.5e-51 206.1 517 31.5
MSTRG.23386 Avicennia marina HOM05D005482 ORTHO05D006502 1.1e-50 205.7 486 31.7
Cc07_g13970 Coffea canephora HOM05D005482 ORTHO05D006502 1.1e-50 205.7 563 31.3
SGA_v2.0_scaffold108G30927 Striga asiatica HOM05D005482 ORTHO05D006502 3.2e-50 204.1 503 30.6
MD01G1040900 Malus domestica HOM05D005482 ORTHO05D006502 5.5e-50 203.4 631 28.8
FAN23G0007 Fragaria x ananassa HOM05D005482 ORTHO05D006502 7.2e-50 203.0 549 29.3
SMO203G0252 Selaginella moellendorffii HOM05D005482 ORTHO05D006502 7.2e-50 203.0 465 32.9
FAN19G3176 Fragaria x ananassa HOM05D005482 ORTHO05D006502 1.2e-49 202.2 551 29.6
TWI74G1080 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 3.6e-49 200.7 536 30.0
FvH4_1g19490 Fragaria vesca HOM05D005482 ORTHO05D006502 4.7e-49 200.3 551 29.6
MD15G1310400 Malus domestica HOM05D005482 ORTHO05D006502 4.7e-49 200.3 561 29.6
Thecc.01G089100 Theobroma cacao HOM05D005482 ORTHO05D006502 4.7e-49 200.3 622 30.1
CiPaw.08G141000 Carya illinoinensis HOM05D005482 ORTHO05D006502 1.0e-48 199.1 527 31.7
Sed0012268 Sechium edule HOM05D005482 ORTHO05D006502 1.4e-48 198.7 641 28.4
Eucgr.H02447 Eucalyptus grandis HOM05D005482 ORTHO05D006502 2.3e-48 198.0 557 29.4
Lalb_Chr16g0381591 Lupinus albus HOM05D005482 ORTHO05D006502 3.0e-48 197.6 483 30.8
AUR62017985 Chenopodium quinoa HOM05D005482 ORTHO05D006502 4.0e-48 197.2 494 30.8
TAR625G0934 Trochodendron aralioides HOM05D005482 ORTHO05D006502 4.0e-48 197.2 633 27.6
FAN26G3253 Fragaria x ananassa HOM05D005482 ORTHO05D006502 6.7e-48 196.4 546 29.3
Migut.H02285 Erythranthe guttata HOM05D005482 ORTHO05D006502 8.8e-48 196.1 510 31.0
Nn1g05603 Nelumbo nucifera HOM05D005482 ORTHO05D006502 8.8e-48 196.1 571 28.0
Sabra07G0009200 Salix brachista HOM05D005482 ORTHO05D006502 8.8e-48 196.1 530 30.4
Gohir.D12G079700 Gossypium hirsutum HOM05D005482 ORTHO05D006502 1.5e-47 195.3 673 28.7
Gorai.008G093000 Gossypium raimondii HOM05D005482 ORTHO05D006502 1.5e-47 195.3 673 28.4
Sabra15G0071300 Salix brachista HOM05D005482 ORTHO05D006502 2.6e-47 194.5 465 31.6
Manes.12G125300 Manihot esculenta HOM05D005482 ORTHO05D006502 3.3e-47 194.1 546 31.0
Potri.007G011800 Populus trichocarpa HOM05D005482 ORTHO05D006502 5.7e-47 193.4 616 29.9
CANSAT01G3178 Cannabis sativa HOM05D005482 ORTHO05D006502 1.7e-46 191.8 529 31.4
Gohir.A12G084900 Gossypium hirsutum HOM05D005482 ORTHO05D006502 1.7e-46 191.8 674 28.3
Lj2A532G30 Lonicera japonica HOM05D005482 ORTHO05D006502 1.1e-45 189.1 550 29.6
ClCG01G018310 Citrullus lanatus HOM05D005482 ORTHO05D006502 3.1e-45 187.6 485 30.7
Mapoly0105s0033 Marchantia polymorpha HOM05D005482 ORTHO05D006502 3.1e-45 187.6 574 28.0
THA.LOC104798625 Tarenaya hassleriana HOM05D005482 ORTHO05D006502 4.1e-45 187.2 634 29.2
CSS0020800 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 5.3e-45 186.8 492 31.1
CsaV3_6G044940 Cucumis sativus L. HOM05D005482 ORTHO05D006502 9.1e-45 186.0 480 30.0
C03p60440 Brassica napus HOM05D005482 ORTHO05D006502 1.2e-44 185.7 497 29.8
BolC3t18305H Brassica oleracea HOM05D005482 ORTHO05D006502 1.2e-44 185.7 497 29.8
CARHR279520 Cardamine hirsuta HOM05D005482 ORTHO05D006502 1.2e-44 185.7 687 29.0
Hma1.2p1_0369F.1_g137400 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 2.7e-44 184.5 553 28.2
vmacro18548 Vaccinium macrocarpon HOM05D005482 ORTHO05D006502 2.7e-44 184.5 517 28.0
RcHm_v2.0_Chr2g0110941 Rosa chinensis HOM05D005482 ORTHO05D006502 3.5e-44 184.1 565 28.7
Sp2g28640 Schrenkiella parvula HOM05D005482 ORTHO05D006502 7.7e-44 183.0 519 30.8
Sc03g0000430 Simmondsia chinensis HOM05D005482 ORTHO05D006502 2.2e-43 181.4 521 30.1
TWI77G0993 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 2.2e-43 181.4 632 28.2
Carub.0008s2640 Capsella rubella HOM05D005482 ORTHO05D006502 6.5e-43 179.9 672 28.9
HanXRQChr12g0368991 Helianthus annuus HOM05D005482 ORTHO05D006502 8.5e-43 179.5 517 30.8
Glyma.09G200000 Glycine max HOM05D005482 ORTHO05D006502 3.2e-42 177.6 494 30.8
Ca_25228_v3 Cicer arietinum L. HOM05D005482 ORTHO05D006502 4.2e-42 177.2 498 29.7
AT5G65540 Arabidopsis thaliana HOM05D005482 ORTHO05D006502 5.5e-42 176.8 681 28.8
EL10Ac6g15187 Beta vulgaris HOM05D005482 ORTHO05D006502 1.6e-41 175.3 545 29.9
MELO3C007709.2 Cucumis melo HOM05D005482 ORTHO05D006502 1.6e-41 175.3 635 27.2
Thhalv10003865m.g Eutrema salsugineum HOM05D005482 ORTHO05D006502 1.6e-41 175.3 674 27.4
AL8G43140 Arabidopsis lyrata HOM05D005482 ORTHO05D006502 2.1e-41 174.9 667 28.9
Duzib264G1263 Durio zibethinus HOM05D005482 ORTHO05D006502 2.1e-41 174.9 629 28.0
PGR102G1704 Punica granatum HOM05D005482 ORTHO05D006502 2.1e-41 174.9 526 29.3
Ciclev10025202m.g Citrus clementina HOM05D005482 ORTHO05D006502 2.7e-41 174.5 478 29.3
Aa31LG3G16620 Aethionema arabicum HOM05D005482 ORTHO05D006502 6.1e-41 173.3 564 29.1
Rhsim08G0017200 Rhododendron simsii HOM05D005482 ORTHO05D006502 6.1e-41 173.3 478 27.2
Ah.03g139850 Amaranthus hybridus HOM05D005482 ORTHO05D006502 8.0e-41 172.9 645 27.8
Glyma.01G021600 Glycine max HOM05D005482 ORTHO05D006502 1.0e-40 172.6 468 28.2
VMungo1215G0139 Vigna mungo HOM05D005482 ORTHO05D006502 2.3e-40 171.4 467 28.7
Oeu042113.2 Olea europaea HOM05D005482 ORTHO05D006502 4.0e-40 170.6 508 29.3
Lsat_1_v5_gn_3_62981 Lactuca sativa HOM05D005482 ORTHO05D006502 1.5e-39 168.7 512 28.5
Medtr5g031750 Medicago truncatula HOM05D005482 ORTHO05D006502 2.0e-39 168.3 472 28.8
ECA246G0291 Erigeron canadensis HOM05D005482 ORTHO05D006502 2.6e-39 167.9 516 29.3
HPP92_017563 Vanilla planifolia HOM05D005482 ORTHO05D006502 2.6e-39 167.9 656 28.2
Zm00001eb061260 Zea mays HOM05D005482 ORTHO05D006502 4.4e-39 167.2 522 29.7
Phvul.002G145800 Phaseolus vulgaris HOM05D005482 ORTHO05D006502 5.7e-39 166.8 482 29.0
Hund16521 Selenicereus undatus HOM05D005482 ORTHO05D006502 5.7e-39 166.8 517 27.9
arahy.Tifrunner.gnm1.ann1.52LQAS Arachis hypogaea HOM05D005482 ORTHO05D006502 7.5e-39 166.4 518 28.6
arahy.Tifrunner.gnm1.ann1.HVQN9F Arachis hypogaea HOM05D005482 ORTHO05D006502 7.5e-39 166.4 518 28.6
DCAR_003442 Daucus carota HOM05D005482 ORTHO05D006502 7.5e-39 166.4 526 28.9
Psat3g169840 Pisum sativum HOM05D005482 ORTHO05D006502 7.5e-39 166.4 513 29.2
Oeu017109.1 Olea europaea HOM05D005482 ORTHO05D006502 4.8e-38 163.7 459 29.8
A06p32390 Brassica napus HOM05D005482 ORTHO05D006502 8.3e-38 162.9 543 26.7
BraA06t26164Z Brassica rapa HOM05D005482 ORTHO05D006502 8.3e-38 162.9 543 26.7
Aqoxy5G01366 Aquilegia oxysepala HOM05D005482 ORTHO05D006502 1.8e-37 161.8 573 26.4
Os03g0802300 Oryza sativa ssp. japonica HOM05D005482 ORTHO05D006502 1.8e-37 161.8 552 27.9
Atru.chr3.678 Acer truncatum HOM05D005482 ORTHO05D006502 7.0e-37 159.8 577 26.5
BcaC01g02786 Brassica carinata HOM05D005482 ORTHO05D006502 1.6e-36 158.7 511 28.6
Cpa.g.sc55.13 Carica papaya HOM05D005482 ORTHO05D006502 1.6e-36 158.7 687 27.2
Atru.chr3.724 Acer truncatum HOM05D005482 ORTHO05D006502 3.5e-36 157.5 577 26.3
Lj2g0006088 Lotus japonicus HOM05D005482 ORTHO05D006502 3.8e-35 154.1 527 28.1
SalBow3G1020 Salvia bowleyana HOM05D005482 ORTHO05D006502 3.0e-32 144.4 407 30.7
CSS0030560 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 5.2e-32 143.7 420 29.8
CiPaw.07G046300 Carya illinoinensis HOM05D005482 ORTHO05D006502 4.4e-31 140.6 492 28.5
Dinv13587 Davidia involucrata HOM05D005482 ORTHO05D006502 2.7e-28 131.3 417 28.1
unitig_736.g22591 Utricularia gibba HOM05D005482 ORTHO05D006502 2.8e-25 121.3 528 25.9
Haze_03890 Corylus avellana HOM05D005482 ORTHO05D006502 3.6e-25 120.9 429 25.6
GSVIVG01002523001 Vitis vinifera HOM05D005482 ORTHO05D006502 3.6e-25 120.9 266 33.1
TPR.G7258 Trifolium pratense HOM05D005482 ORTHO05D006502 7.5e-23 113.2 306 31.0
Hma1.2p1_0369F.1_g137390 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 6.4e-22 110.2 409 25.9
Haze_03887 Corylus avellana HOM05D005482 ORTHO05D006502 7.0e-21 106.7 122 47.5
ATR0767G089 Amborella trichopoda HOM05D005482 ORTHO05D006502 1.7e-19 102.1 266 28.6
TPR.G36831 Trifolium pratense HOM05D005482 ORTHO05D006502 5.0e-19 100.5 287 29.3
Actinidia24562 Actinidia chinensis HOM05D005482 ORTHO05D006502 1.1e-18 99.4 235 29.8
CiPaw.10G105100 Carya illinoinensis HOM05D005482 ORTHO05D006502 2.1e-17 95.1 113 46.0
CiPaw.01G172300 Carya illinoinensis HOM05D005482 ORTHO05D006502 6.2e-17 93.6 152 36.8
CDE07G2034 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 2.7e-12 78.2 91 45.1
CiPaw.03G215800 Carya illinoinensis HOM05D005482 ORTHO05D006502 7.8e-12 76.6 75 49.3
Solyc01g056590.2 Solanum lycopersicum HOM05D005482 ORTHO05D006502 2.3e-11 75.1 100 41.0
Solyc11g016980.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 1.3e-06 59.3 222 28.8


User provided reference genes

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