Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_15620 Physcomitrium patens HOM05D007852 ORTHO05D009916 3.3e-77 291.6 140 100.0
AagrBONN_evm.TU.Sc2ySwM_344.4223 Anthoceros agrestis HOM05D007852 ORTHO05D009916 6.7e-14 81.3 104 43.3
Mapoly0042s0091 Marchantia polymorpha HOM05D007852 ORTHO05D009916 2.4e-11 72.8 135 31.1
Mapoly0039s0106 Marchantia polymorpha HOM05D007852 ORTHO05D009916 7.2e-08 61.2 121 29.8
Zm00001eb094410 Zea mays HOM05D007852 ORTHO05D009916 9.3e-08 60.8 44 56.8
Os01g0729500 Oryza sativa ssp. japonica HOM05D007852 ORTHO05D009916 1.2e-07 60.5 47 57.4
Solyc02g071940.1 Solanum lycopersicum HOM05D007852 ORTHO05D009916 1.6e-07 60.1 56 48.2
Sopen02g020930 Solanum pennellii HOM05D007852 ORTHO05D009916 1.6e-07 60.1 56 48.2
PGSC0003DMG400028458 Solanum tuberosum HOM05D007852 ORTHO05D009916 1.6e-07 60.1 55 49.1
BcaC01g00138 Brassica carinata HOM05D007852 ORTHO05D009916 2.1e-07 59.7 47 51.1
Nitab4.5_0008572g0040 Nicotiana tabacum HOM05D007852 ORTHO05D009916 2.7e-07 59.3 47 51.1
Carub.0001s2803 Capsella rubella HOM05D007852 ORTHO05D009916 6.1e-07 58.2 59 40.7
Sed0006029 Sechium edule HOM05D007852 ORTHO05D009916 6.1e-07 58.2 54 46.3
Hund21452 Selenicereus undatus HOM05D007852 ORTHO05D009916 6.1e-07 58.2 76 40.8
BcaC06g35465 Brassica carinata HOM05D007852 ORTHO05D009916 7.9e-07 57.8 59 40.7
MELO3C017616.2 Cucumis melo HOM05D007852 ORTHO05D009916 7.9e-07 57.8 54 48.1
Lsat_1_v5_gn_4_49360 Lactuca sativa HOM05D007852 ORTHO05D009916 7.9e-07 57.8 46 47.8
Sp1g25680 Schrenkiella parvula HOM05D007852 ORTHO05D009916 7.9e-07 57.8 53 43.4
A08p24840 Brassica napus HOM05D007852 ORTHO05D009916 1.0e-06 57.4 47 48.9
BraA08t34439Z Brassica rapa HOM05D007852 ORTHO05D009916 1.0e-06 57.4 47 48.9
ClCG03G007370 Citrullus lanatus HOM05D007852 ORTHO05D009916 1.0e-06 57.4 54 48.1
MELO3C002684.2 Cucumis melo HOM05D007852 ORTHO05D009916 1.0e-06 57.4 54 48.1
AL1G43620 Arabidopsis lyrata HOM05D007852 ORTHO05D009916 1.3e-06 57.0 47 48.9
ATR0820G245 Amborella trichopoda HOM05D007852 ORTHO05D009916 1.8e-06 56.6 54 44.4
Oeu001067.1 Olea europaea HOM05D007852 ORTHO05D009916 2.3e-06 56.2 53 41.5
BcaB03g12179 Brassica carinata HOM05D007852 ORTHO05D009916 3.9e-06 55.5 84 33.3
A07p10220 Brassica napus HOM05D007852 ORTHO05D009916 3.9e-06 55.5 47 46.8
CARHR029160 Cardamine hirsuta HOM05D007852 ORTHO05D009916 3.9e-06 55.5 47 46.8
Hma1.2p1_1749F.1_g300710 Hydrangea macrophylla HOM05D007852 ORTHO05D009916 3.9e-06 55.5 66 43.9
Potri.004G062700 Populus trichocarpa HOM05D007852 ORTHO05D009916 3.9e-06 55.5 45 48.9
C03p76190 Brassica napus HOM05D007852 ORTHO05D009916 5.1e-06 55.1 43 51.2
BraA07t28818Z Brassica rapa HOM05D007852 ORTHO05D009916 5.1e-06 55.1 44 50.0
MSTRG.16177 Avicennia marina HOM05D007852 ORTHO05D009916 8.7e-06 54.3 51 43.1
DCAR_003974 Daucus carota HOM05D007852 ORTHO05D009916 8.7e-06 54.3 65 40.0
FAN21G2050 Fragaria x ananassa HOM05D007852 ORTHO05D009916 8.7e-06 54.3 46 47.8
Gohir.D06G206100 Gossypium hirsutum HOM05D007852 ORTHO05D009916 8.7e-06 54.3 56 39.3
Gorai.010G240500 Gossypium raimondii HOM05D007852 ORTHO05D009916 8.7e-06 54.3 56 39.3
Psat7g067600 Pisum sativum HOM05D007852 ORTHO05D009916 8.7e-06 54.3 45 48.9
RcHm_v2.0_Chr5g0011991 Rosa chinensis HOM05D007852 ORTHO05D009916 8.7e-06 54.3 57 43.9


User provided reference genes

Program Settings