Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_13440 Physcomitrium patens HOM05D000002 ORTHO05D310155 8.9e-37 156.4 76 100.0
Nn1g02200 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.9e-08 61.2 70 35.7
Pp3c16_70 Physcomitrium patens HOM05D000002 ORTHO05D317166 5.1e-08 60.8 71 38.0
ECA233G2170 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-07 59.7 60 38.3
MD08G1027200 Malus domestica HOM05D000002 ORTHO05D000001 1.9e-07 58.9 70 34.3
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 4.3e-07 57.8 70 34.3
CSS0003706 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-07 57.4 70 35.7
QL11p047249 Quercus lobata HOM05D000002 ORTHO05D000001 9.6e-07 56.6 70 35.7
SHI05323 Sapria himalayana HOM05D000002 ORTHO05D000001 9.6e-07 56.6 70 32.9
Sopen01g006740 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen01g021410 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen02g017450 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen04g011600 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen04g023650 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen04g026340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen05g009710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen05g021830 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen05g028350 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen07g002690 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen07g002700 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen09g020870 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen10g013010 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen11g015120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen11g015130 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen12g003850 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen12g003860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen12g023960 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
Sopen12g023970 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 58 41.4
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-06 55.8 70 32.9
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-06 55.8 70 32.9
MSTRG.24652 Avicennia marina HOM05D000002 ORTHO05D000001 2.1e-06 55.5 60 45.0
ECA247G3087 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-06 55.5 66 40.9
CSS0045643 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-06 55.1 63 38.1
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-06 55.1 70 32.9
ECA247G1168 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-06 55.1 70 34.3
SHI51559 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.1 70 28.6
SHI05468 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-06 54.7 70 30.0
SHI37534 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-06 54.7 54 44.4
CSS0021351 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-06 54.3 63 38.1
CSS0040555 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-06 54.3 61 34.4
ECA234G0077 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-06 54.3 72 31.9
ECA238G4552 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-06 54.3 66 39.4
RcHm_v2.0_Chr2g0154461 Rosa chinensis HOM05D000002 ORTHO05D000001 4.7e-06 54.3 70 34.3
RcHm_v2.0_Chr3g0453691 Rosa chinensis HOM05D000002 ORTHO05D000001 4.7e-06 54.3 70 34.3
RcHm_v2.0_Chr7g0198271 Rosa chinensis HOM05D000002 ORTHO05D000001 4.7e-06 54.3 70 34.3
SHI28426 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 60 41.7
SEGI_07554 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.7e-06 54.3 70 32.9
CSS0032896 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-06 53.9 58 41.4
ECA234G0914 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-06 53.9 72 30.6
MD03G1131300 Malus domestica HOM05D000002 ORTHO05D000001 6.2e-06 53.9 70 34.3
MD15G1058600 Malus domestica HOM05D001840 ORTHO05D000001 8.1e-06 53.5 70 32.9
Nn5g28050 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.1e-06 53.5 70 32.9
SHI49905 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-06 53.5 61 39.3
SHI51724 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-06 53.5 61 39.3
Sopen01g011790 Solanum pennellii HOM05D000002 ORTHO05D000001 8.1e-06 53.5 58 41.4
Sopen08g016360 Solanum pennellii HOM05D000002 ORTHO05D000001 8.1e-06 53.5 58 39.7


User provided reference genes

Program Settings