Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_11400 Physcomitrium patens HOM05D005267 ORTHO05D006303 1.2e-112 409.8 197 100.0
Pp3c8_10880 Physcomitrium patens HOM05D005267 ORTHO05D006303 8.6e-76 287.3 220 63.6
Mapoly0004s0240 Marchantia polymorpha HOM05D005267 ORTHO05D006303 8.7e-68 260.8 176 69.9
SMO143G0102 Selaginella moellendorffii HOM05D005267 ORTHO05D006303 2.4e-62 242.7 175 62.9
CBR_g49867 Chara braunii HOM05D000019 ORTHO05D000353 6.4e-55 218.0 180 56.1
MCO14G360 Micromonas commoda HOM05D005267 ORTHO05D006303 1.1e-43 180.6 184 46.7
AagrBONN_evm.TU.Sc2ySwM_362.204 Anthoceros agrestis HOM05D005267 ORTHO05D006303 1.8e-41 173.3 154 51.3
Cre10.g418700 Chlamydomonas reinhardtii HOM05D005267 ORTHO05D006303 3.5e-37 159.1 189 41.3
PRCOL_00003572 Prasinoderma coloniale HOM05D005267 ORTHO05D006303 1.1e-35 154.1 151 47.7
Prupe.7G087000 Prunus persica HOM05D005267 ORTHO05D006303 6.1e-13 78.6 167 27.5
Lj1A1066G52 Lonicera japonica HOM05D005267 ORTHO05D006303 2.3e-12 76.6 173 28.9
GSVIVG01022470001 Vitis vinifera HOM05D005267 ORTHO05D006303 3.0e-12 76.3 166 27.1
Ciclev10012610m.g Citrus clementina HOM05D005267 ORTHO05D006303 3.9e-12 75.9 168 26.8
CANSAT64G2985 Cannabis sativa HOM05D005267 ORTHO05D006303 6.7e-12 75.1 176 25.6
COL.COLO4_29458 Corchorus olitorius HOM05D005267 ORTHO05D006303 1.5e-11 73.9 169 25.4
THA.LOC104821240 Tarenaya hassleriana HOM05D005267 ORTHO05D006303 1.5e-11 73.9 165 24.8
TAR623G0682 Trochodendron aralioides HOM05D005267 ORTHO05D006303 1.5e-11 73.9 187 26.2
arahy.Tifrunner.gnm1.ann1.3RXG3F Arachis hypogaea HOM05D005267 ORTHO05D006303 2.6e-11 73.2 165 26.7
Oeu063094.3 Olea europaea HOM05D005267 ORTHO05D006303 2.6e-11 73.2 180 25.0
Lalb_Chr21g0316191 Lupinus albus HOM05D005267 ORTHO05D006303 3.3e-11 72.8 169 25.4
Thecc.05G181400 Theobroma cacao HOM05D005267 ORTHO05D006303 3.3e-11 72.8 169 26.0
FvH4_6g21270 Fragaria vesca HOM05D005267 ORTHO05D006303 4.4e-11 72.4 164 26.2
arahy.Tifrunner.gnm1.ann1.H25EQ1 Arachis hypogaea HOM05D005267 ORTHO05D006303 5.7e-11 72.0 165 25.5
Duzib128G1921 Durio zibethinus HOM05D005267 ORTHO05D006303 5.7e-11 72.0 169 26.6
FAN02G1071 Fragaria x ananassa HOM05D005267 ORTHO05D006303 5.7e-11 72.0 164 26.2
FAN05G1850 Fragaria x ananassa HOM05D005267 ORTHO05D006303 7.4e-11 71.6 164 26.2
FAN14G1206 Fragaria x ananassa HOM05D005267 ORTHO05D006303 9.7e-11 71.2 164 26.2
Nn6g32442 Nelumbo nucifera HOM05D005267 ORTHO05D006303 9.7e-11 71.2 170 27.6
Aa31LG10G13030 Aethionema arabicum HOM05D006729 ORTHO05D008502 1.3e-10 70.9 184 23.9
CDE05G1441 Ceratophyllum demersum HOM05D005267 ORTHO05D006303 2.2e-10 70.1 164 27.4
RcHm_v2.0_Chr3g0477741 Rosa chinensis HOM05D005267 ORTHO05D006303 2.8e-10 69.7 164 26.2
RcHm_v2.0_Chr3g0477781 Rosa chinensis HOM05D005267 ORTHO05D006303 2.8e-10 69.7 164 26.2
Eucgr.A02526 Eucalyptus grandis HOM05D005267 ORTHO05D006303 3.7e-10 69.3 174 24.1
MBI05_g37655_MAGBIO Magnolia biondii HOM05D005267 ORTHO05D006303 3.7e-10 69.3 164 25.0
ClCG01G015080 Citrullus lanatus HOM05D005267 ORTHO05D006303 4.8e-10 68.9 170 25.3
Cc06_g07120 Coffea canephora HOM05D005267 ORTHO05D006303 4.8e-10 68.9 170 27.1
ECA248G0309 Erigeron canadensis HOM05D005267 ORTHO05D006303 4.8e-10 68.9 167 27.5
Eucgr.A02521 Eucalyptus grandis HOM05D005267 ORTHO05D006303 4.8e-10 68.9 174 24.1
Os03g0749900 Oryza sativa ssp. japonica HOM05D005267 ORTHO05D006303 4.8e-10 68.9 168 26.2
Atru.chr8.1242 Acer truncatum HOM05D005267 ORTHO05D006303 8.2e-10 68.2 171 24.6
EL10Ac5g11779 Beta vulgaris HOM05D005267 ORTHO05D006303 1.1e-09 67.8 170 25.9
Cpa.g.sc85.6 Carica papaya HOM05D005267 ORTHO05D006303 1.1e-09 67.8 169 25.4
AL5G40230 Arabidopsis lyrata HOM05D005267 ORTHO05D006303 1.4e-09 67.4 165 23.0
MELO3C024594.2 Cucumis melo HOM05D005267 ORTHO05D006303 1.4e-09 67.4 170 25.3
Lj5g0006264 Lotus japonicus HOM05D005267 ORTHO05D006303 1.4e-09 67.4 170 25.3
Cfa020104 Carpinus fangiana HOM05D005267 ORTHO05D006303 1.8e-09 67.0 174 26.4
CiPaw.10G022300 Carya illinoinensis HOM05D005267 ORTHO05D006303 1.8e-09 67.0 173 24.9
Lalb_Chr02g0153991 Lupinus albus HOM05D005267 ORTHO05D006303 1.8e-09 67.0 169 23.7
PGR142G1416 Punica granatum HOM05D005267 ORTHO05D006303 1.8e-09 67.0 171 25.7
Hund15032 Selenicereus undatus HOM05D005267 ORTHO05D006303 1.8e-09 67.0 175 26.3
TWI77G0597 Tripterygium wilfordii HOM05D005267 ORTHO05D006303 1.8e-09 67.0 176 23.9
BraA09t40549Z Brassica rapa HOM05D005267 ORTHO05D006303 2.4e-09 66.6 165 23.6
MD14G1048200 Malus domestica HOM05D005267 ORTHO05D006303 2.4e-09 66.6 166 26.5
Sed0012434 Sechium edule HOM05D005267 ORTHO05D006303 2.4e-09 66.6 171 25.1
Sc01g0005180 Simmondsia chinensis HOM05D005267 ORTHO05D006303 2.4e-09 66.6 133 28.6
ATR0697G123 Amborella trichopoda HOM05D006729 ORTHO05D008502 3.1e-09 66.2 165 26.1
BcaC07g40256 Brassica carinata HOM05D005267 ORTHO05D006303 3.1e-09 66.2 165 23.6
A09p51030 Brassica napus HOM05D006729 ORTHO05D008502 3.1e-09 66.2 148 24.3
CARHR168860 Cardamine hirsuta HOM05D005267 ORTHO05D006303 3.1e-09 66.2 165 22.4
Haze_20086 Corylus avellana HOM05D005267 ORTHO05D006303 3.1e-09 66.2 172 25.0
DCAR_013470 Daucus carota HOM05D006729 ORTHO05D008502 3.1e-09 66.2 170 26.5
Thhalv10006199m.g Eutrema salsugineum HOM05D005267 ORTHO05D006303 3.1e-09 66.2 165 23.0
QL07p025833 Quercus lobata HOM05D005267 ORTHO05D006303 3.1e-09 66.2 176 25.0
Aqoxy1G00565 Aquilegia oxysepala HOM05D005267 ORTHO05D006303 4.1e-09 65.9 172 26.7
Lsat_1_v5_gn_1_56341 Lactuca sativa HOM05D005267 ORTHO05D006303 4.1e-09 65.9 172 25.0
Nitab4.5_0008653g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 4.1e-09 65.9 170 24.7
PGSC0003DMG400028129 Solanum tuberosum HOM05D005267 ORTHO05D006303 4.1e-09 65.9 170 24.7
AT3G58470 Arabidopsis thaliana HOM05D005267 ORTHO05D006303 5.3e-09 65.5 165 23.0
C08p33850 Brassica napus HOM05D006729 ORTHO05D008502 5.3e-09 65.5 148 24.3
BolC8t50983H Brassica oleracea HOM05D006729 ORTHO05D008502 5.3e-09 65.5 148 24.3
Carub.0005s2521 Capsella rubella HOM05D005267 ORTHO05D006303 5.3e-09 65.5 165 23.0
CBR_g551 Chara braunii HOM05D005267 ORTHO05D006303 7.0e-09 65.1 118 30.5
FAN05G5707 Fragaria x ananassa HOM05D005267 ORTHO05D006303 7.0e-09 65.1 178 25.3
Rhsim03G0057300 Rhododendron simsii HOM05D005267 ORTHO05D006303 7.0e-09 65.1 170 24.7
Sopen10g032100 Solanum pennellii HOM05D005267 ORTHO05D006303 9.1e-09 64.7 170 24.1
Zm00001eb057270 Zea mays HOM05D005267 ORTHO05D006303 9.1e-09 64.7 169 25.4
Ca_18103_v3 Cicer arietinum L. HOM05D005267 ORTHO05D006303 1.2e-08 64.3 164 23.2
Migut.L01860 Erythranthe guttata HOM05D005267 ORTHO05D006303 1.2e-08 64.3 165 24.8
Psat6g110480 Pisum sativum HOM05D005267 ORTHO05D006303 1.2e-08 64.3 164 23.8
Solyc10g081590.2 Solanum lycopersicum HOM05D005267 ORTHO05D006303 1.2e-08 64.3 170 24.1
TPR.G30771 Trifolium pratense HOM05D005267 ORTHO05D006303 1.2e-08 64.3 165 24.2
BcaC07g40203 Brassica carinata HOM05D005267 ORTHO05D006303 1.6e-08 63.9 165 23.0
PSO384G1433 Papaver somniferum HOM05D005267 ORTHO05D006303 2.0e-08 63.5 164 23.8
AUR62036286 Chenopodium quinoa HOM05D005267 ORTHO05D006303 2.6e-08 63.2 171 25.7
CSS0044429 Camellia sinensis var. sinensis HOM05D005267 ORTHO05D006303 3.5e-08 62.8 171 25.1
Potri.016G063600 Populus trichocarpa HOM05D005267 ORTHO05D006303 4.5e-08 62.4 169 24.9
Actinidia37788 Actinidia chinensis HOM05D005267 ORTHO05D006303 7.7e-08 61.6 165 24.2
CsaV3_6G041190 Cucumis sativus L. HOM05D005267 ORTHO05D006303 7.7e-08 61.6 170 23.5
Sp5g04410 Schrenkiella parvula HOM05D005267 ORTHO05D006303 1.0e-07 61.2 165 23.0
SGA_v2.0_scaffold41G15783 Striga asiatica HOM05D005267 ORTHO05D006303 1.0e-07 61.2 170 24.1
BcaC07g40255 Brassica carinata HOM05D005267 ORTHO05D006303 5.0e-07 58.9 125 24.8
Gorai.006G146100 Gossypium raimondii HOM05D005267 ORTHO05D006303 8.5e-07 58.2 105 27.6
arahy.Tifrunner.gnm1.ann1.TFGA9S Arachis hypogaea HOM05D005267 ORTHO05D006303 1.1e-06 57.8 100 27.0
Gohir.D09G127600 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.5e-06 57.4 105 27.6
Pp3c20_23410 Physcomitrium patens HOM05D005267 ORTHO05D006303 1.5e-06 57.4 169 23.1
Sabra16G0066000 Salix brachista HOM05D005267 ORTHO05D006303 1.9e-06 57.0 170 24.7
AUR62039735 Chenopodium quinoa HOM05D005267 ORTHO05D006303 2.5e-06 56.6 188 23.9
Gohir.D09G127100 Gossypium hirsutum HOM05D005267 ORTHO05D006303 2.5e-06 56.6 104 27.9
Peaxi162Scf00060g01112 Petunia axillaris HOM05D005267 ORTHO05D006303 4.2e-06 55.8 165 24.8
Gohir.A09G131300 Gossypium hirsutum HOM05D005267 ORTHO05D006303 5.5e-06 55.5 99 27.3
SEGI_05913 Sequoiadendron giganteum HOM05D005267 ORTHO05D006303 7.2e-06 55.1 99 27.3


User provided reference genes

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