Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_11370 Physcomitrium patens HOM05D006960 ORTHO05D008699 6.4e-177 624.0 324 100.0
Mapoly0053s0024 Marchantia polymorpha HOM05D006960 ORTHO05D008699 4.2e-59 232.6 240 58.8
SMO351G0341 Selaginella moellendorffii HOM05D006960 ORTHO05D008699 1.7e-49 200.7 160 68.1
Gohir.A11G097200 Gossypium hirsutum HOM05D006960 ORTHO05D008699 5.1e-49 199.1 242 51.2
COL.COLO4_21448 Corchorus olitorius HOM05D006960 ORTHO05D008699 2.5e-48 196.8 240 50.0
Gohir.D11G102000 Gossypium hirsutum HOM05D006960 ORTHO05D008699 2.5e-48 196.8 253 48.6
Gorai.007G109000 Gossypium raimondii HOM05D006960 ORTHO05D008699 2.5e-48 196.8 253 49.0
HPP92_002925 Vanilla planifolia HOM05D006960 ORTHO05D008699 1.6e-47 194.1 161 65.8
AUR62004502 Chenopodium quinoa HOM05D006960 ORTHO05D008699 3.6e-47 193.0 237 50.6
Thecc.01G341400 Theobroma cacao HOM05D006960 ORTHO05D008699 3.6e-47 193.0 237 51.1
PSO063G6262 Papaver somniferum HOM05D006960 ORTHO05D008699 2.4e-46 190.3 246 47.2
Potri.014G099500 Populus trichocarpa HOM05D006960 ORTHO05D008699 2.4e-46 190.3 237 46.8
Os04g0460500 Oryza sativa ssp. japonica HOM05D006960 ORTHO05D008699 3.1e-46 189.9 242 48.8
Sp1g01000 Schrenkiella parvula HOM05D006960 ORTHO05D008699 3.1e-46 189.9 236 51.3
MD07G1150800 Malus domestica HOM05D006960 ORTHO05D008699 4.0e-46 189.5 246 47.2
Haze_15666 Corylus avellana HOM05D000451 ORTHO05D000351 5.3e-46 189.1 285 44.2
PGSC0003DMG400007011 Solanum tuberosum HOM05D006960 ORTHO05D008699 5.3e-46 189.1 235 48.5
Atru.chr5.678 Acer truncatum HOM05D006960 ORTHO05D008699 6.9e-46 188.7 176 58.5
RcHm_v2.0_Chr1g0359831 Rosa chinensis HOM05D006960 ORTHO05D008699 1.2e-45 188.0 235 48.9
TWI14G0597 Tripterygium wilfordii HOM05D006960 ORTHO05D008699 1.2e-45 188.0 237 49.4
ClCG09G009460 Citrullus lanatus HOM05D006960 ORTHO05D008699 1.5e-45 187.6 162 62.3
Zm00001eb080710 Zea mays HOM05D006960 ORTHO05D008699 1.5e-45 187.6 242 48.3
MELO3C024139.2 Cucumis melo HOM05D006960 ORTHO05D008699 2.0e-45 187.2 158 63.3
Thhalv10008544m.g Eutrema salsugineum HOM05D006960 ORTHO05D008699 2.0e-45 187.2 239 48.1
Solyc05g050570.3 Solanum lycopersicum HOM05D006960 ORTHO05D008699 2.0e-45 187.2 235 48.1
DCAR_021504 Daucus carota HOM05D006960 ORTHO05D008699 2.6e-45 186.8 246 46.7
FAN06G2002 Fragaria x ananassa HOM05D006960 ORTHO05D008699 4.5e-45 186.0 235 47.7
FAN06G3195 Fragaria x ananassa HOM05D006960 ORTHO05D008699 5.8e-45 185.7 235 47.7
Oeu007886.1 Olea europaea HOM05D006960 ORTHO05D008699 5.8e-45 185.7 235 47.7
Oeu014974.1 Olea europaea HOM05D006960 ORTHO05D008699 5.8e-45 185.7 235 47.7
MBI06_g44795_MAGBIO Magnolia biondii HOM05D006960 ORTHO05D008699 7.6e-45 185.3 162 63.0
Nitab4.5_0000258g0220 Nicotiana tabacum HOM05D006960 ORTHO05D008699 7.6e-45 185.3 235 47.2
Nitab4.5_0004506g0020 Nicotiana tabacum HOM05D006960 ORTHO05D008699 7.6e-45 185.3 235 47.2
BraA09t42243Z Brassica rapa HOM05D006960 ORTHO05D008699 9.9e-45 184.9 236 49.2
FAN10G4095 Fragaria x ananassa HOM05D006960 ORTHO05D008699 9.9e-45 184.9 235 48.1
PGR142G3971 Punica granatum HOM05D006960 ORTHO05D008699 9.9e-45 184.9 260 45.4
EL10Ac1g00259 Beta vulgaris HOM05D006960 ORTHO05D008699 1.3e-44 184.5 154 63.6
FvH4_7g16680 Fragaria vesca HOM05D006960 ORTHO05D008699 1.3e-44 184.5 235 47.7
FAN10G0984 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.3e-44 184.5 235 48.1
Sopen05g029010 Solanum pennellii HOM05D006960 ORTHO05D008699 1.3e-44 184.5 235 47.2
Prupe.2G189500 Prunus persica HOM05D006960 ORTHO05D008699 1.7e-44 184.1 235 46.0
AT1G01290 Arabidopsis thaliana HOM05D006960 ORTHO05D008699 2.2e-44 183.7 240 50.0
CSS0028122 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 4.9e-44 182.6 237 48.1
Cpa.g.sc46.111 Carica papaya HOM05D006960 ORTHO05D008699 4.9e-44 182.6 236 49.2
Sabra14G0073000 Salix brachista HOM05D006960 ORTHO05D008699 4.9e-44 182.6 238 47.1
CSS0036785 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 6.4e-44 182.2 237 47.7
Carub.0001s0093 Capsella rubella HOM05D006960 ORTHO05D008699 6.4e-44 182.2 237 48.5
FAN01G3090 Fragaria x ananassa HOM05D006960 ORTHO05D008699 6.4e-44 182.2 235 47.7
QL04p060559 Quercus lobata HOM05D006960 ORTHO05D008699 6.4e-44 182.2 237 46.4
CANSAT56G1276 Cannabis sativa HOM05D006960 ORTHO05D008699 8.4e-44 181.8 154 63.6
HanXRQChr06g0170731 Helianthus annuus HOM05D006960 ORTHO05D008699 8.4e-44 181.8 237 47.3
Lsat_1_v5_gn_8_13101 Lactuca sativa HOM05D006960 ORTHO05D008699 1.1e-43 181.4 237 46.8
Manes.05G022300 Manihot esculenta HOM05D006960 ORTHO05D008699 1.1e-43 181.4 237 48.1
Sc01g0002630 Simmondsia chinensis HOM05D000016 ORTHO05D007083 1.4e-43 181.0 160 61.2
ECA236G0577 Erigeron canadensis HOM05D006960 ORTHO05D008699 1.9e-43 180.6 237 46.8
Migut.B01880 Erythranthe guttata HOM05D006960 ORTHO05D008699 1.9e-43 180.6 249 46.6
Peaxi162Scf00716g00022 Petunia axillaris HOM05D006960 ORTHO05D008699 1.9e-43 180.6 220 49.5
SalBow3G0783 Salvia bowleyana HOM05D006960 ORTHO05D008699 1.9e-43 180.6 156 62.2
Aqoxy6G00316 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 2.4e-43 180.3 238 45.4
Sed0021558 Sechium edule HOM05D006960 ORTHO05D008699 2.4e-43 180.3 158 60.8
TAR629G1073 Trochodendron aralioides HOM05D006960 ORTHO05D008699 3.2e-43 179.9 154 61.7
Actinidia20248 Actinidia chinensis HOM05D000567 ORTHO05D001981 4.2e-43 179.5 310 39.4
BolC8t52877H Brassica oleracea HOM05D006960 ORTHO05D008699 4.2e-43 179.5 241 47.3
CARHR001180 Cardamine hirsuta HOM05D006960 ORTHO05D008699 4.2e-43 179.5 235 48.5
CAN.G1178.29 Capsicum annuum HOM05D006960 ORTHO05D008699 5.4e-43 179.1 235 46.8
Nn8g41032 Nelumbo nucifera HOM05D006960 ORTHO05D008699 5.4e-43 179.1 154 63.0
vmacro12673 Vaccinium macrocarpon HOM05D006960 ORTHO05D008699 7.1e-43 178.7 160 60.0
Aa31LG5G970 Aethionema arabicum HOM05D000451 ORTHO05D000351 1.2e-42 177.9 240 48.3
AL1G11170 Arabidopsis lyrata HOM05D006960 ORTHO05D008699 1.2e-42 177.9 154 64.3
CAN.G1385.4 Capsicum annuum HOM05D006960 ORTHO05D008699 1.2e-42 177.9 178 55.6
Rhsim01G0172900 Rhododendron simsii HOM05D006960 ORTHO05D008699 1.6e-42 177.6 158 60.1
Cc01_g12480 Coffea canephora HOM05D006960 ORTHO05D008699 2.1e-42 177.2 239 45.6
MSTRG.17349 Avicennia marina HOM05D006960 ORTHO05D008699 2.7e-42 176.8 156 62.2
A09p69060 Brassica napus HOM05D006960 ORTHO05D008699 2.7e-42 176.8 154 63.6
Rhsim04G0222700 Rhododendron simsii HOM05D006960 ORTHO05D008699 2.7e-42 176.8 158 60.1
C08p53630 Brassica napus HOM05D006960 ORTHO05D008699 3.5e-42 176.4 154 63.6
TPR.G4075 Trifolium pratense HOM05D006960 ORTHO05D008699 3.5e-42 176.4 238 47.5
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 4.6e-42 176.0 156 60.9
Ciclev10022060m.g Citrus clementina HOM05D006960 ORTHO05D008699 4.6e-42 176.0 154 61.0
Lalb_Chr06g0163941 Lupinus albus HOM05D006960 ORTHO05D008699 6.0e-42 175.6 235 46.8
Psat6g234040 Pisum sativum HOM05D006960 ORTHO05D008699 1.3e-41 174.5 235 45.5
Lj5g0001318 Lotus japonicus HOM05D006960 ORTHO05D008699 1.8e-41 174.1 244 45.1
PSO170G4910 Papaver somniferum HOM05D006960 ORTHO05D008699 1.8e-41 174.1 239 45.6
Ca_11259_v3 Cicer arietinum L. HOM05D006960 ORTHO05D008699 2.3e-41 173.7 235 46.0
GSVIVG01027159001 Vitis vinifera HOM05D006960 ORTHO05D008699 3.0e-41 173.3 154 61.7
Aqoxy3G01066 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 6.7e-41 172.2 154 59.1
ATR0602G026 Amborella trichopoda HOM05D006960 ORTHO05D008699 1.1e-40 171.4 155 60.6
SGA_v2.0_scaffold22G09984 Striga asiatica HOM05D006960 ORTHO05D008699 1.5e-40 171.0 154 60.4
Eucgr.E00049 Eucalyptus grandis HOM05D006960 ORTHO05D008699 1.9e-40 170.6 157 59.2
arahy.Tifrunner.gnm1.ann1.CCVT8N Arachis hypogaea HOM05D006960 ORTHO05D008699 3.3e-40 169.9 153 61.4
unitig_899.g14796 Utricularia gibba HOM05D006960 ORTHO05D008699 3.3e-40 169.9 156 58.3
Glyma.20G102700 Glycine max HOM05D006960 ORTHO05D008699 7.4e-40 168.7 152 61.2
Phvul.007G014400 Phaseolus vulgaris HOM05D006960 ORTHO05D008699 1.3e-39 167.9 152 59.9
VMungo0720G2201 Vigna mungo HOM05D006960 ORTHO05D008699 2.1e-39 167.2 152 59.9
Medtr5g015740 Medicago truncatula HOM05D006960 ORTHO05D008699 3.7e-39 166.4 244 43.4
Medtr1g114590 Medicago truncatula HOM05D006960 ORTHO05D008699 1.8e-38 164.1 244 43.0
MCO01G113 Micromonas commoda HOM05D006960 ORTHO05D008699 4.0e-38 162.9 156 61.5
Cre08.g361050 Chlamydomonas reinhardtii HOM05D006960 ORTHO05D008699 1.5e-37 161.0 259 43.2
Hund16718 Selenicereus undatus HOM05D006960 ORTHO05D008699 4.5e-37 159.5 221 46.2
Dinv22299 Davidia involucrata HOM05D006960 ORTHO05D008699 4.2e-35 152.9 145 59.3
CBR_g23014 Chara braunii HOM05D006960 ORTHO05D008699 5.5e-35 152.5 167 53.9
VMungo0964G0001 Vigna mungo HOM05D006960 ORTHO05D008699 3.7e-31 139.8 152 52.0
AUR62014969 Chenopodium quinoa HOM05D006960 ORTHO05D008699 1.6e-26 124.4 237 39.2
Cfa022703 Carpinus fangiana HOM05D006960 ORTHO05D008699 2.3e-25 120.6 164 50.0
HPP92_028636 Vanilla planifolia HOM05D006960 ORTHO05D008699 5.7e-24 115.9 162 49.4
CDE10G0236 Ceratophyllum demersum HOM05D006960 ORTHO05D008699 1.3e-23 114.8 92 59.8
CDE10G0916 Ceratophyllum demersum HOM05D000108 ORTHO05D001781 1.8e-22 110.9 112 55.4
FAN03G0019 Fragaria x ananassa HOM05D006960 ORTHO05D008699 4.5e-21 106.3 92 58.7
AUR62023452 Chenopodium quinoa HOM05D000040 ORTHO05D000759 2.1e-18 97.4 216 37.0
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 4.6e-18 96.3 132 44.7
CsaV3_7G025390 Cucumis sativus L. HOM05D006960 ORTHO05D008699 3.9e-17 93.2 83 60.2
PRCOL_00000953 Prasinoderma coloniale HOM05D006960 ORTHO05D008699 1.5e-13 81.3 231 32.9
Cpa.g.sc96.27 Carica papaya HOM05D006960 ORTHO05D008699 2.0e-13 80.9 151 41.7
TAR636G2744 Trochodendron aralioides HOM05D006960 ORTHO05D008699 9.7e-08 62.0 86 44.2


User provided reference genes

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