Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_10650 Physcomitrium patens HOM05D009840 ORTHO05D012696 0.0e+00 1706.0 814 100.0
Pp3c19_18730 Physcomitrium patens HOM05D009840 ORTHO05D012696 0.0e+00 1500.0 864 85.5
Pp3c26_7090 Physcomitrium patens HOM05D009840 ORTHO05D012696 0.0e+00 1499.6 854 86.2
Pp3c11_15180 Physcomitrium patens HOM05D009840 ORTHO05D012696 0.0e+00 1497.3 864 85.2
Pp3c22_19210 Physcomitrium patens HOM05D009840 ORTHO05D012696 0.0e+00 1464.9 812 88.3
Pp3c6_20570 Physcomitrium patens HOM05D009840 ORTHO05D012696 0.0e+00 1457.2 864 83.6
Pp3c21_6560 Physcomitrium patens HOM05D009840 ORTHO05D012696 0.0e+00 1453.3 838 85.6
Pp3s52_110 Physcomitrium patens HOM05D009840 ORTHO05D012696 0.0e+00 1396.3 845 81.9
Pp3c8_8460 Physcomitrium patens HOM05D009840 ORTHO05D012696 0.0e+00 1323.5 864 77.1
Pp3c15_7570 Physcomitrium patens HOM05D009840 ORTHO05D012696 0.0e+00 1142.1 625 90.1
Pp3c24_3070 Physcomitrium patens HOM05D009840 ORTHO05D012696 0.0e+00 1078.5 625 86.9
Pp3c5_28260 Physcomitrium patens HOM05D009840 ORTHO05D012696 0.0e+00 1076.6 616 86.2
Pp3s691_10 Physcomitrium patens HOM05D009840 ORTHO05D012696 1.6e-285 986.1 586 82.9
Pp3c6_22510 Physcomitrium patens HOM05D009840 ORTHO05D012696 2.8e-285 985.3 540 90.0
Pp3c26_10310 Physcomitrium patens HOM05D009840 ORTHO05D012696 2.4e-281 972.2 579 82.7
Pp3c1_36690 Physcomitrium patens HOM05D009840 ORTHO05D012696 1.7e-263 912.9 529 86.2
Pp3c23_2840 Physcomitrium patens HOM05D009840 ORTHO05D012696 4.2e-249 865.1 524 82.4
Pp3c26_10380 Physcomitrium patens HOM05D009840 ORTHO05D012696 1.8e-167 594.0 324 90.4
Pp3c26_10320 Physcomitrium patens HOM05D009840 ORTHO05D317817 6.7e-98 362.8 204 86.8
Pp3c1_36680 Physcomitrium patens HOM05D009840 ORTHO05D012696 3.3e-81 307.4 149 92.6
Pp3c27_5590 Physcomitrium patens HOM05D009840 ORTHO05D012696 7.4e-81 306.2 346 52.6
Pp3c3_38160 Physcomitrium patens HOM05D009840 ORTHO05D014672 1.1e-68 265.8 474 35.0
Pp3c15_9530 Physcomitrium patens HOM05D009840 ORTHO05D313655 1.4e-47 195.7 95 95.8
Pp3c6_22500 Physcomitrium patens HOM05D009840 ORTHO05D012696 7.5e-41 173.3 88 90.9
Pp3c27_5600 Physcomitrium patens HOM05D009840 ORTHO05D309650 5.1e-29 134.0 68 92.6
CBR_g3273 Chara braunii HOM05D012326 ORTHO05D011892 1.4e-26 125.9 377 27.6
CBR_g44941 Chara braunii HOM05D012326 ORTHO05D011892 6.4e-24 117.1 379 27.2
CBR_g4107 Chara braunii HOM05D012326 ORTHO05D011892 8.7e-21 106.7 244 32.0
CBR_g34382 Chara braunii HOM05D008817 ORTHO05D012167 1.5e-17 95.9 478 22.4
CBR_g26080 Chara braunii HOM05D001238 ORTHO05D000800 8.4e-16 90.1 319 24.1
CBR_g19784 Chara braunii HOM05D009220 ORTHO05D012167 1.3e-13 82.8 230 27.0
CBR_g59873 Chara braunii HOM05D009220 ORTHO05D012167 1.1e-12 79.7 294 22.4
Pp3c10_40 Physcomitrium patens HOM05D009840 ORTHO05D014672 1.5e-12 79.3 79 53.2
CBR_g25915 Chara braunii HOM05D008971 ORTHO05D011892 2.5e-12 78.6 269 26.4
AagrBONN_evm.TU.Sc2ySwM_228.4255 Anthoceros agrestis HOM05D009220 ORTHO05D012167 9.6e-12 76.6 74 50.0
CBR_g40552 Chara braunii HOM05D008817 ORTHO05D012167 1.6e-11 75.9 481 22.9
CBR_g50433 Chara braunii HOM05D012326 ORTHO05D011892 1.6e-11 75.9 195 31.8
AagrBONN_evm.TU.Sc2ySwM_340.982 Anthoceros agrestis HOM05D009220 ORTHO05D012167 2.1e-11 75.5 92 43.5
AagrBONN_evm.TU.Sc2ySwM_368.121 Anthoceros agrestis HOM05D009220 ORTHO05D012167 2.1e-11 75.5 84 42.9
CBR_g30550 Chara braunii HOM05D012326 ORTHO05D011892 2.1e-11 75.5 149 32.9
AagrBONN_evm.TU.Sc2ySwM_340.1722 Anthoceros agrestis HOM05D009220 ORTHO05D012167 4.0e-10 71.2 73 38.4
CBR_g9169 Chara braunii HOM05D012326 ORTHO05D011892 5.3e-10 70.9 153 30.1
CBR_g48331 Chara braunii HOM05D008817 ORTHO05D012167 1.5e-09 69.3 231 25.5
CBR_g2668 Chara braunii HOM05D008817 ORTHO05D012167 2.0e-09 68.9 464 22.2
CBR_g31111 Chara braunii HOM05D008817 ORTHO05D012167 4.5e-09 67.8 105 32.4
AagrBONN_evm.TU.Sc2ySwM_340.1163 Anthoceros agrestis HOM05D009220 ORTHO05D012167 5.8e-09 67.4 73 41.1
CBR_g46014 Chara braunii HOM05D008971 ORTHO05D011892 9.9e-09 66.6 90 44.4
AagrBONN_evm.TU.Sc2ySwM_114.13 Anthoceros agrestis HOM05D009220 ORTHO05D012167 2.9e-08 65.1 245 24.1
CBR_g59742 Chara braunii HOM05D008817 ORTHO05D012167 1.1e-07 63.2 116 32.8
AagrBONN_evm.TU.Sc2ySwM_228.3201 Anthoceros agrestis HOM05D009220 ORTHO05D012167 4.6e-06 57.8 58 46.6


User provided reference genes

Program Settings