Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_8870 Physcomitrium patens HOM05D006772 ORTHO05D008367 2.3e-120 435.6 231 100.0
SEGI_18606 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 3.9e-11 72.8 128 33.6
ATR0564G457 Amborella trichopoda HOM05D006772 ORTHO05D008367 8.7e-11 71.6 124 34.7
SEGI_37864 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 9.7e-10 68.2 120 33.3
Eucgr.E00285 Eucalyptus grandis HOM05D006772 ORTHO05D008367 1.1e-08 64.7 123 32.5
Phvul.002G006800 Phaseolus vulgaris HOM05D006772 ORTHO05D008367 9.0e-08 61.6 151 28.5
Glyma.05G111700 Glycine max HOM05D006772 ORTHO05D008367 1.2e-07 61.2 144 30.6
Mapoly0047s0021 Marchantia polymorpha HOM05D001618 ORTHO05D001486 1.2e-07 61.2 152 28.9
Sabra01G0111500 Salix brachista HOM05D006772 ORTHO05D008367 1.2e-07 61.2 121 33.1
VMungo0251G2965 Vigna mungo HOM05D006772 ORTHO05D008367 1.2e-07 61.2 144 31.2
arahy.Tifrunner.gnm1.ann1.6N9PAN Arachis hypogaea HOM05D006772 ORTHO05D008367 1.5e-07 60.8 151 31.1
arahy.Tifrunner.gnm1.ann1.WNGN5W Arachis hypogaea HOM05D006772 ORTHO05D008367 1.5e-07 60.8 151 31.1
VMungo1215G2403 Vigna mungo HOM05D006772 ORTHO05D008367 2.0e-07 60.5 153 30.7
PGR042G0478 Punica granatum HOM05D006772 ORTHO05D008367 2.6e-07 60.1 131 33.6
DCAR_024967 Daucus carota HOM05D006772 ORTHO05D008367 3.4e-07 59.7 141 30.5
Thecc.03G229400 Theobroma cacao HOM05D006772 ORTHO05D008367 3.4e-07 59.7 121 32.2
FAN04G3098 Fragaria x ananassa HOM05D006772 ORTHO05D008367 5.9e-07 58.9 121 33.1
MBI19_g35573_MAGBIO Magnolia biondii HOM05D000204 ORTHO05D001486 5.9e-07 58.9 40 55.0
SMO118G0016 Selaginella moellendorffii HOM05D000204 ORTHO05D001668 7.7e-07 58.5 41 56.1
CiPaw.12G062700 Carya illinoinensis HOM05D006772 ORTHO05D008367 1.0e-06 58.2 122 29.5
Ciclev10033079m.g Citrus clementina HOM05D006772 ORTHO05D008367 1.0e-06 58.2 121 28.9
SMO118G0108 Selaginella moellendorffii HOM05D000204 ORTHO05D001486 1.3e-06 57.8 39 56.4
Lj4g0015139 Lotus japonicus HOM05D006772 ORTHO05D008367 2.2e-06 57.0 121 28.1
Lj4g0019114 Lotus japonicus HOM05D006772 ORTHO05D008367 2.2e-06 57.0 121 27.3
Atru.chr6.1734 Acer truncatum HOM05D006772 ORTHO05D008367 2.9e-06 56.6 145 29.7
Manes.17G012000 Manihot esculenta HOM05D006772 ORTHO05D008367 2.9e-06 56.6 150 30.0
Sabra03G0061100 Salix brachista HOM05D006772 ORTHO05D008367 2.9e-06 56.6 121 32.2
PGSC0003DMG400036785 Solanum tuberosum HOM05D006772 ORTHO05D008367 2.9e-06 56.6 121 31.4
ECA240G4560 Erigeron canadensis HOM05D000236 ORTHO05D000192 3.8e-06 56.2 121 29.8
Glyma.11G043000 Glycine max HOM05D006772 ORTHO05D008367 3.8e-06 56.2 121 33.1
HanXRQChr03g0084031 Helianthus annuus HOM05D006772 ORTHO05D008367 3.8e-06 56.2 122 30.3
Mapoly0034s0008 Marchantia polymorpha HOM05D000204 ORTHO05D010448 3.8e-06 56.2 125 25.6
RcHm_v2.0_Chr7g0209491 Rosa chinensis HOM05D006772 ORTHO05D008367 3.8e-06 56.2 121 29.8
CDE08G0662 Ceratophyllum demersum HOM05D006772 ORTHO05D008367 5.0e-06 55.8 121 30.6
FvH4_5g21990 Fragaria vesca HOM05D006772 ORTHO05D008367 5.0e-06 55.8 121 32.2
FAN18G1611 Fragaria x ananassa HOM05D006772 ORTHO05D008367 5.0e-06 55.8 121 32.2
Medtr5g014370 Medicago truncatula HOM05D006772 ORTHO05D008367 5.0e-06 55.8 121 28.9
Nn1g00537 Nelumbo nucifera HOM05D006772 ORTHO05D008367 5.0e-06 55.8 141 31.2
Potri.003G091400 Populus trichocarpa HOM05D006772 ORTHO05D008367 6.5e-06 55.5 121 30.6
Solyc08g077020.1 Solanum lycopersicum HOM05D006772 ORTHO05D008367 6.5e-06 55.5 121 33.9
Sopen08g025600 Solanum pennellii HOM05D006772 ORTHO05D008367 6.5e-06 55.5 121 33.9
CANSAT21G2446 Cannabis sativa HOM05D006772 ORTHO05D008367 8.5e-06 55.1 144 27.1
FAN08G3182 Fragaria x ananassa HOM05D006772 ORTHO05D008367 8.5e-06 55.1 121 32.2
FAN13G1934 Fragaria x ananassa HOM05D006772 ORTHO05D008367 8.5e-06 55.1 121 32.2


User provided reference genes

Program Settings