Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.5e-209 732.6 377 100.0
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 2.9e-144 515.8 314 83.4
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 4.8e-107 392.1 322 59.9
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 3.1e-106 389.4 315 60.3
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.3e-85 320.1 316 50.3
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 3.9e-85 319.3 316 49.7
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 2.5e-84 316.6 317 49.8
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 4.3e-84 315.8 314 47.5
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 2.8e-83 313.2 317 49.8
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 6.3e-83 312.0 315 48.6
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 6.3e-83 312.0 315 49.5
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 2.4e-82 310.1 315 49.5
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 2.4e-82 310.1 315 47.3
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 5.3e-82 308.9 315 47.6
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 3.4e-81 306.2 314 47.8
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 4.5e-81 305.8 305 51.5
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 4.5e-81 305.8 314 47.8
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 7.7e-81 305.1 315 47.3
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 7.7e-81 305.1 315 48.9
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 1.3e-80 304.3 313 48.9
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 1.7e-80 303.9 314 46.2
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 1.7e-80 303.9 315 47.6
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 2.2e-80 303.5 311 49.2
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 3.8e-80 302.8 314 46.8
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 5.0e-80 302.4 314 46.5
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 5.0e-80 302.4 314 46.5
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 5.0e-80 302.4 313 49.5
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 5.0e-80 302.4 315 48.3
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 5.0e-80 302.4 313 47.9
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.1e-79 301.2 311 49.2
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 1.4e-79 300.8 313 47.6
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.9e-79 300.4 314 46.5
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.9e-79 300.4 315 47.9
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.9e-79 300.4 317 47.3
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.9e-79 300.4 316 47.5
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 2.5e-79 300.1 314 46.8
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 2.5e-79 300.1 301 46.8
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 2.5e-79 300.1 312 48.4
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 3.2e-79 299.7 313 48.2
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 3.2e-79 299.7 311 49.2
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 3.2e-79 299.7 314 46.2
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 4.2e-79 299.3 314 46.5
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 4.2e-79 299.3 311 49.2
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 7.2e-79 298.5 312 48.7
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 7.2e-79 298.5 312 47.8
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 1.2e-78 297.7 314 45.9
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 1.6e-78 297.4 315 47.3
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 1.6e-78 297.4 315 48.3
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.6e-78 297.4 322 47.8
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 1.6e-78 297.4 315 46.3
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.7e-78 296.6 311 50.2
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 4.6e-78 295.8 315 46.7
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 4.6e-78 295.8 313 48.9
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 6.1e-78 295.4 302 47.7
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 7.9e-78 295.0 314 45.2
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 7.9e-78 295.0 313 48.9
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 1.0e-77 294.7 320 45.3
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.8e-77 293.9 316 45.6
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 1.8e-77 293.9 317 47.0
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 1.8e-77 293.9 289 49.5
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 3.0e-77 293.1 314 45.5
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 5.1e-77 292.4 316 46.2
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 6.7e-77 292.0 302 47.4
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 1.1e-76 291.2 315 45.1
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 2.0e-76 290.4 315 45.1
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 2.6e-76 290.0 297 48.8
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 3.3e-76 289.7 314 45.9
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 4.4e-76 289.3 301 48.5
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 9.7e-76 288.1 309 47.6
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 6.3e-75 285.4 303 46.9
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 1.1e-74 284.6 316 46.8
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 3.1e-74 283.1 321 44.2
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 3.1e-74 283.1 294 50.7
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 1.2e-73 281.2 285 46.3
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 2.2e-72 276.9 273 48.7
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 5.0e-72 275.8 314 44.6
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 1.4e-71 274.2 316 44.6
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 3.2e-71 273.1 370 40.5
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 4.2e-71 272.7 268 51.1
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 9.4e-71 271.6 317 45.7
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 1.4e-69 267.7 316 45.3
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 2.0e-68 263.8 269 47.6
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 9.7e-68 261.5 312 44.9
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.7e-67 260.8 333 42.0
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 3.1e-66 256.5 302 43.4
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 4.1e-66 256.1 309 43.7
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 9.1e-66 255.0 298 44.3
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 2.2e-64 250.4 314 42.7
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 5.2e-61 239.2 339 39.5
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 8.8e-61 238.4 254 48.0
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 1.7e-59 234.2 244 45.9
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 4.8e-59 232.6 316 42.7
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.8e-58 230.7 335 39.1
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.6e-57 227.6 240 45.4
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 2.9e-56 223.4 239 48.1
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 3.6e-54 216.5 181 55.8
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 4.0e-53 213.0 247 44.1
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 4.0e-53 213.0 247 44.1
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 7.2e-47 192.2 247 43.3
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 9.5e-47 191.8 189 49.7
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.6e-46 191.0 202 47.0
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 5.7e-44 182.6 178 50.6
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.2e-38 164.9 178 44.9
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 9.8e-28 128.6 143 42.7
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 3.7e-27 126.7 210 38.1
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 4.6e-25 119.8 225 34.2
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 5.6e-23 112.8 148 40.5
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 9.5e-23 112.1 103 51.5
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 1.2e-22 111.7 126 42.9
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 6.0e-17 92.8 78 56.4
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.0e-16 92.0 96 45.8
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 4.7e-14 83.2 93 41.9
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 1.8e-13 81.3 88 42.0
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 6.6e-08 62.8 70 45.7
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 5.6e-07 59.7 72 40.3


User provided reference genes

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