Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_6220 Physcomitrium patens HOM05D007524 ORTHO05D009475 1.7e-179 632.5 314 100.0
Carub.0008s2532 Capsella rubella HOM05D007524 ORTHO05D009475 1.9e-40 170.6 349 35.2
Mapoly0070s0006 Marchantia polymorpha HOM05D007524 ORTHO05D009475 1.2e-39 167.9 348 35.6
BcaB04g19971 Brassica carinata HOM05D007524 ORTHO05D009475 2.1e-39 167.2 349 34.7
Thhalv10005594m.g Eutrema salsugineum HOM05D007524 ORTHO05D009475 6.0e-39 165.6 324 36.4
BcaC04g23318 Brassica carinata HOM05D007524 ORTHO05D009475 1.8e-38 164.1 343 35.0
Dinv25593 Davidia involucrata HOM05D007524 ORTHO05D009475 3.9e-38 162.9 331 35.6
TAR628G0034 Trochodendron aralioides HOM05D007524 ORTHO05D009475 5.1e-38 162.5 350 34.9
CARHR278490 Cardamine hirsuta HOM05D007524 ORTHO05D009475 6.7e-38 162.2 349 34.7
PSO017G6978 Papaver somniferum HOM05D007524 ORTHO05D009475 6.7e-38 162.2 346 36.7
RcHm_v2.0_Chr4g0446351 Rosa chinensis HOM05D007524 ORTHO05D009475 1.5e-37 161.0 343 33.5
Sp2g27600 Schrenkiella parvula HOM05D007524 ORTHO05D009475 1.5e-37 161.0 349 34.1
AT5G64520 Arabidopsis thaliana HOM05D007524 ORTHO05D009475 4.3e-37 159.5 357 35.3
C09p09780 Brassica napus HOM05D007524 ORTHO05D009475 4.3e-37 159.5 336 35.4
AL8G41910 Arabidopsis lyrata HOM05D007524 ORTHO05D009475 1.3e-36 157.9 352 33.0
A09p08680 Brassica napus HOM05D007524 ORTHO05D009475 1.3e-36 157.9 341 34.6
arahy.Tifrunner.gnm1.ann1.NAL0L4 Arachis hypogaea HOM05D007524 ORTHO05D009475 2.1e-36 157.1 328 34.8
Aqoxy5G02489 Aquilegia oxysepala HOM05D007524 ORTHO05D009475 4.8e-36 156.0 332 35.2
Hma1.2p1_0057F.1_g032020 Hydrangea macrophylla HOM05D007524 ORTHO05D009475 6.3e-36 155.6 338 32.8
Actinidia07457 Actinidia chinensis HOM05D007524 ORTHO05D009475 8.2e-36 155.2 345 34.2
Cc00_g05860 Coffea canephora HOM05D007524 ORTHO05D009475 8.2e-36 155.2 329 34.7
BolC9t53889H Brassica oleracea HOM05D007524 ORTHO05D009475 1.4e-35 154.5 340 35.6
Sc06g0003090 Simmondsia chinensis HOM05D007524 ORTHO05D009475 3.1e-35 153.3 342 33.3
BraA09t36516Z Brassica rapa HOM05D007524 ORTHO05D009475 4.1e-35 152.9 345 34.8
Thecc.02G312000 Theobroma cacao HOM05D007524 ORTHO05D009475 5.3e-35 152.5 345 34.8
MELO3C020032.2 Cucumis melo HOM05D007524 ORTHO05D009475 9.0e-35 151.8 333 32.7
Lj3g0014826 Lotus japonicus HOM05D007524 ORTHO05D009475 1.2e-34 151.4 330 33.9
Glyma.11G104200 Glycine max HOM05D007524 ORTHO05D009475 1.5e-34 151.0 325 33.5
arahy.Tifrunner.gnm1.ann1.SSM27G Arachis hypogaea HOM05D007524 ORTHO05D009475 2.0e-34 150.6 326 34.4
Eucgr.J00844 Eucalyptus grandis HOM05D007524 ORTHO05D009475 2.6e-34 150.2 339 33.0
Sopen01g004060 Solanum pennellii HOM05D007524 ORTHO05D009475 2.6e-34 150.2 333 33.0
THA.LOC104818453 Tarenaya hassleriana HOM05D007524 ORTHO05D009475 2.6e-34 150.2 350 32.0
ECA247G1633 Erigeron canadensis HOM05D007524 ORTHO05D009475 3.4e-34 149.8 326 35.6
FvH4_4g36590 Fragaria vesca HOM05D007524 ORTHO05D009475 5.9e-34 149.1 336 32.7
FAN07G0447 Fragaria x ananassa HOM05D007524 ORTHO05D009475 5.9e-34 149.1 336 33.9
VMungo1127G1744 Vigna mungo HOM05D007524 ORTHO05D009475 5.9e-34 149.1 323 32.5
AagrBONN_evm.TU.Sc2ySwM_368.2219 Anthoceros agrestis HOM05D007524 ORTHO05D009475 1.0e-33 148.3 301 35.2
MD16G1006200 Malus domestica HOM05D007524 ORTHO05D009475 1.0e-33 148.3 336 32.1
Zm00001eb146450 Zea mays HOM05D007524 ORTHO05D009475 1.3e-33 147.9 337 32.6
Gorai.013G099200 Gossypium raimondii HOM05D007524 ORTHO05D009475 2.9e-33 146.7 338 34.0
Gohir.A13G091600 Gossypium hirsutum HOM05D007524 ORTHO05D009475 8.5e-33 145.2 339 33.6
CsaV3_5G013190 Cucumis sativus L. HOM05D007524 ORTHO05D009475 1.1e-32 144.8 332 32.8
TPR.G21554 Trifolium pratense HOM05D007524 ORTHO05D009475 1.1e-32 144.8 329 32.8
GSVIVG01022414001 Vitis vinifera HOM05D007524 ORTHO05D009475 1.1e-32 144.8 317 32.8
Manes.03G082500 Manihot esculenta HOM05D007524 ORTHO05D009475 1.9e-32 144.1 330 33.3
Peaxi162Scf00032g00619 Petunia axillaris HOM05D007524 ORTHO05D009475 1.9e-32 144.1 339 31.9
Sed0011089 Sechium edule HOM05D007524 ORTHO05D009475 2.5e-32 143.7 333 32.1
Solyc01g008520.3 Solanum lycopersicum HOM05D007524 ORTHO05D009475 2.5e-32 143.7 333 32.4
AUR62039047 Chenopodium quinoa HOM05D007524 ORTHO05D009475 3.2e-32 143.3 320 33.8
Aa31LG1G17400 Aethionema arabicum HOM05D007524 ORTHO05D009475 4.2e-32 142.9 340 31.2
Prupe.1G344400 Prunus persica HOM05D007524 ORTHO05D009475 5.5e-32 142.5 308 34.1
Glyma.12G029200 Glycine max HOM05D007524 ORTHO05D009475 9.3e-32 141.7 325 32.3
Duzib248G0930 Durio zibethinus HOM05D007524 ORTHO05D009475 1.6e-31 141.0 343 34.1
Medtr4g074200 Medicago truncatula HOM05D007524 ORTHO05D009475 2.7e-31 140.2 333 31.5
SMO367G0885 Selaginella moellendorffii HOM05D007524 ORTHO05D009475 2.7e-31 140.2 304 31.9
PGR119G1695 Punica granatum HOM05D007524 ORTHO05D009475 3.6e-31 139.8 333 32.1
Nitab4.5_0001747g0050 Nicotiana tabacum HOM05D007524 ORTHO05D009475 6.1e-31 139.0 313 32.6
Lalb_Chr19g0139281 Lupinus albus HOM05D007524 ORTHO05D009475 7.9e-31 138.7 328 32.3
FAN17G0147 Fragaria x ananassa HOM05D007524 ORTHO05D009475 1.0e-30 138.3 326 33.7
HanXRQChr04g0100921 Helianthus annuus HOM05D007524 ORTHO05D009475 1.8e-30 137.5 324 32.4
FAN12G0445 Fragaria x ananassa HOM05D007524 ORTHO05D009475 2.3e-30 137.1 296 34.8
Rhsim08G0000700 Rhododendron simsii HOM05D007524 ORTHO05D009475 5.1e-30 136.0 324 32.4
Lsat_1_v5_gn_1_28521 Lactuca sativa HOM05D007524 ORTHO05D009475 8.7e-30 135.2 325 31.1
Migut.C01263 Erythranthe guttata HOM05D007524 ORTHO05D009475 1.1e-29 134.8 331 32.0
PSO063G3654 Papaver somniferum HOM05D007524 ORTHO05D009475 2.5e-29 133.7 294 36.7
Nitab4.5_0000825g0060 Nicotiana tabacum HOM05D007524 ORTHO05D009475 4.3e-29 132.9 319 31.7
Hund06881 Selenicereus undatus HOM05D007524 ORTHO05D009475 4.8e-28 129.4 330 30.3
Psat7g173160 Pisum sativum HOM05D007524 ORTHO05D009475 6.3e-28 129.0 295 32.9
SGA_v2.0_scaffold118G32494 Striga asiatica HOM05D007524 ORTHO05D009475 1.2e-26 124.8 348 31.6
Gohir.D13G086900 Gossypium hirsutum HOM05D007524 ORTHO05D009475 1.5e-26 124.4 298 34.6
Haze_11736 Corylus avellana HOM05D007524 ORTHO05D009475 7.7e-26 122.1 380 28.7
Oeu032986.1 Olea europaea HOM05D007524 ORTHO05D009475 1.0e-25 121.7 279 36.6
Phvul.011G032400 Phaseolus vulgaris HOM05D007524 ORTHO05D009475 3.2e-24 116.7 245 34.3
unitig_46.g18111 Utricularia gibba HOM05D007524 ORTHO05D009475 7.2e-24 115.5 334 29.6
ATR0584G209 Amborella trichopoda HOM05D007524 ORTHO05D009475 6.7e-22 109.0 282 34.4
EL10Ac4g08947 Beta vulgaris HOM05D007524 ORTHO05D009475 8.8e-22 108.6 193 37.3
Atru.chr11.1209 Acer truncatum HOM05D007524 ORTHO05D009475 2.6e-21 107.1 377 28.9
Ca_03043_v3 Cicer arietinum L. HOM05D007524 ORTHO05D009475 2.6e-21 107.1 236 34.3
CiPaw.06G059700 Carya illinoinensis HOM05D007524 ORTHO05D009475 5.7e-21 105.9 220 30.5
Nn5g27870 Nelumbo nucifera HOM05D007524 ORTHO05D009475 9.7e-21 105.1 201 36.8
vmacro18683 Vaccinium macrocarpon HOM05D007524 ORTHO05D009475 5.3e-19 99.4 280 32.5
AUR62004790 Chenopodium quinoa HOM05D007524 ORTHO05D009475 9.1e-19 98.6 329 27.4
DCAR_013072 Daucus carota HOM05D007524 ORTHO05D009475 1.5e-13 81.3 319 26.6
MCO09G042 Micromonas commoda HOM05D007524 ORTHO05D009475 1.0e-09 68.6 366 24.0
Cre06.g278174 Chlamydomonas reinhardtii HOM05D007524 ORTHO05D009475 2.7e-07 60.5 229 27.1
PRCOL_00006630 Prasinoderma coloniale HOM05D007524 ORTHO05D009475 1.8e-06 57.8 210 24.3
ClCG11G001140 Citrullus lanatus HOM05D007524 ORTHO05D009475 4.0e-06 56.6 107 35.5
Nn5g27871 Nelumbo nucifera HOM05D007524 ORTHO05D009475 8.8e-06 55.5 125 33.6


User provided reference genes

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