Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 4.0e-188 661.4 357 100.0
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 1.7e-93 347.1 331 58.3
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 8.6e-82 308.1 268 58.6
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 3.2e-76 289.7 321 49.5
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 7.0e-76 288.5 251 59.4
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 8.6e-74 281.6 272 53.3
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 7.3e-73 278.5 272 54.4
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 9.5e-73 278.1 264 53.8
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 1.2e-72 277.7 268 53.0
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 1.2e-72 277.7 260 54.6
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.2e-72 277.7 253 58.1
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 2.1e-72 276.9 264 53.4
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 2.1e-72 276.9 264 53.4
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.0e-71 274.6 299 48.8
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 1.0e-71 274.6 300 49.7
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 1.4e-71 274.2 301 49.5
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 1.4e-71 274.2 277 51.3
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 1.8e-71 273.9 275 49.8
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.3e-71 273.5 260 53.8
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 3.1e-71 273.1 296 52.4
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 3.1e-71 273.1 262 55.0
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 3.1e-71 273.1 263 53.6
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 3.1e-71 273.1 277 51.6
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 3.1e-71 273.1 275 52.7
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 4.0e-71 272.7 285 50.2
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 6.8e-71 271.9 260 53.8
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.5e-70 270.8 301 49.2
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 2.6e-70 270.0 263 53.6
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 3.4e-70 269.6 270 55.6
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 3.4e-70 269.6 262 51.9
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 4.4e-70 269.2 262 53.8
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 7.5e-70 268.5 275 49.5
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 9.8e-70 268.1 266 51.9
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 9.8e-70 268.1 263 53.2
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 1.7e-69 267.3 274 50.0
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 1.7e-69 267.3 263 53.2
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 2.2e-69 266.9 265 52.1
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 2.9e-69 266.5 265 53.6
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 3.7e-69 266.2 260 53.1
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 4.9e-69 265.8 303 47.5
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 4.9e-69 265.8 295 49.5
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 6.4e-69 265.4 273 50.2
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 6.4e-69 265.4 331 47.4
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 8.3e-69 265.0 327 48.0
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 1.1e-68 264.6 260 52.7
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 1.1e-68 264.6 263 54.4
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 1.1e-68 264.6 328 46.0
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.4e-68 264.2 260 51.5
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 1.9e-68 263.8 260 51.5
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 3.2e-68 263.1 293 48.5
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 4.1e-68 262.7 266 51.5
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 5.4e-68 262.3 260 51.2
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 9.2e-68 261.5 281 48.8
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.2e-67 261.2 264 52.3
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 1.6e-67 260.8 285 49.8
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 2.0e-67 260.4 263 51.7
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 2.0e-67 260.4 285 48.8
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 2.0e-67 260.4 262 51.1
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.0e-67 260.4 312 47.1
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 2.7e-67 260.0 277 48.4
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 2.7e-67 260.0 280 49.3
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.7e-67 260.0 327 45.6
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 2.7e-67 260.0 261 51.3
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 4.6e-67 259.2 260 50.8
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 4.6e-67 259.2 260 51.2
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 4.6e-67 259.2 278 48.9
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 6.0e-67 258.8 328 45.1
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 7.8e-67 258.5 325 45.2
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 7.8e-67 258.5 263 51.3
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 1.3e-66 257.7 273 50.2
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.7e-66 257.3 253 50.6
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 3.0e-66 256.5 260 50.0
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 3.0e-66 256.5 260 50.4
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 5.0e-66 255.8 279 49.1
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 6.6e-66 255.4 284 48.6
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 8.6e-66 255.0 276 51.8
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 1.1e-65 254.6 288 47.6
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.9e-65 253.8 250 52.4
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.9e-65 253.8 260 50.8
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 2.5e-65 253.4 290 48.3
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 2.5e-65 253.4 260 50.4
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 3.3e-65 253.1 251 51.8
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 4.3e-65 252.7 270 50.4
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 5.6e-65 252.3 326 42.3
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 1.2e-64 251.1 354 42.4
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 2.1e-64 250.4 298 47.3
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.3e-63 246.9 250 54.4
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 2.0e-62 243.8 333 43.5
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 3.4e-62 243.0 235 51.5
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 4.4e-62 242.7 296 44.3
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 7.5e-62 241.9 293 45.7
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 7.5e-62 241.9 265 47.2
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.3e-61 241.1 239 50.2
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 3.7e-61 239.6 269 48.7
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 6.4e-61 238.8 237 50.6
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 6.4e-61 238.8 285 47.7
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 2.7e-59 233.4 217 54.8
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 7.8e-59 231.9 229 52.0
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 5.1e-58 229.2 248 48.0
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 8.6e-58 228.4 222 51.8
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.1e-56 223.8 254 47.2
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 8.1e-56 221.9 249 49.4
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 3.4e-54 216.5 245 49.0
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.4e-52 210.3 262 46.6
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 1.3e-50 204.5 246 47.2
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 5.6e-49 199.1 176 55.1
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 1.2e-48 198.0 222 45.5
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 2.8e-48 196.8 187 52.9
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 4.7e-48 196.1 178 55.6
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.4e-47 193.7 177 53.1
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 9.9e-38 161.8 243 42.4
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 4.2e-28 129.8 246 34.6
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.6e-27 127.9 102 59.8
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 8.2e-24 115.5 130 46.9
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 1.2e-22 111.7 253 32.4
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 1.7e-21 107.8 125 43.2
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 4.8e-08 63.2 285 27.7


User provided reference genes

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