Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 4.6e-104 381.3 207 100.0
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.8e-103 379.4 207 99.5
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.2e-90 335.9 203 89.2
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.1e-89 333.6 203 88.7
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 2.7e-56 222.6 208 61.1
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 1.8e-55 219.9 207 59.4
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 2.8e-48 196.1 196 55.1
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 9.2e-44 181.0 215 52.1
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 2.7e-43 179.5 158 57.0
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 7.8e-43 177.9 160 57.5
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 3.8e-42 175.6 156 57.1
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 5.0e-42 175.3 179 53.1
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 8.6e-42 174.5 157 55.4
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 1.5e-41 173.7 160 53.8
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 2.5e-41 172.9 158 55.1
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 4.3e-41 172.2 156 55.8
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 4.3e-41 172.2 158 54.4
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 5.6e-41 171.8 156 56.4
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 5.6e-41 171.8 159 53.5
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 5.6e-41 171.8 159 52.8
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 5.6e-41 171.8 162 54.3
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 5.6e-41 171.8 172 52.9
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 9.5e-41 171.0 158 55.7
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 9.5e-41 171.0 159 52.8
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 9.5e-41 171.0 159 52.8
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.2e-40 170.6 158 53.2
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.2e-40 170.6 158 53.8
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 1.2e-40 170.6 169 50.9
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 1.6e-40 170.2 156 55.1
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 1.6e-40 170.2 158 52.5
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 1.6e-40 170.2 203 49.3
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.6e-40 170.2 158 55.7
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 2.1e-40 169.9 180 51.7
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 2.1e-40 169.9 158 53.8
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 2.1e-40 169.9 158 53.8
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 2.1e-40 169.9 158 53.8
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 2.1e-40 169.9 158 55.1
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 2.1e-40 169.9 154 54.5
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 2.1e-40 169.9 160 52.5
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 2.1e-40 169.9 159 52.8
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 2.8e-40 169.5 158 52.5
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 2.8e-40 169.5 192 47.9
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 3.6e-40 169.1 158 53.8
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 4.7e-40 168.7 156 55.1
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 4.7e-40 168.7 160 54.4
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 4.7e-40 168.7 156 54.5
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 4.7e-40 168.7 201 48.3
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 6.1e-40 168.3 158 55.1
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 6.1e-40 168.3 159 53.5
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 6.1e-40 168.3 183 49.2
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 6.1e-40 168.3 158 55.1
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 8.0e-40 167.9 158 53.8
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 8.0e-40 167.9 158 53.8
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 8.0e-40 167.9 156 53.8
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 8.0e-40 167.9 158 53.2
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 8.0e-40 167.9 158 54.4
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 8.0e-40 167.9 159 52.2
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 8.0e-40 167.9 158 55.7
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 8.0e-40 167.9 156 55.1
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 1.0e-39 167.5 156 55.1
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.0e-39 167.5 158 53.2
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 1.4e-39 167.2 158 53.8
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 1.4e-39 167.2 205 46.8
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.4e-39 167.2 201 47.8
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 1.4e-39 167.2 162 53.1
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 1.4e-39 167.2 195 48.2
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 1.4e-39 167.2 160 51.9
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 1.4e-39 167.2 158 54.4
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 1.4e-39 167.2 158 53.8
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 1.8e-39 166.8 158 51.9
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 1.8e-39 166.8 158 55.1
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 2.3e-39 166.4 158 55.1
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 2.3e-39 166.4 158 55.1
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 2.3e-39 166.4 158 55.1
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 2.3e-39 166.4 158 55.1
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 2.3e-39 166.4 156 53.8
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 3.0e-39 166.0 156 53.2
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 3.0e-39 166.0 156 53.2
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 5.2e-39 165.2 194 47.4
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 5.2e-39 165.2 194 47.4
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 5.2e-39 165.2 194 47.4
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 6.8e-39 164.9 158 51.3
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 6.8e-39 164.9 197 48.7
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 8.9e-39 164.5 158 52.5
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 8.9e-39 164.5 194 46.9
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 8.9e-39 164.5 177 49.2
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 8.9e-39 164.5 158 51.3
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 1.2e-38 164.1 158 54.4
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 1.2e-38 164.1 158 54.4
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.2e-38 164.1 194 46.9
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 3.4e-38 162.5 156 50.6
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 3.4e-38 162.5 180 48.3
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 4.4e-38 162.2 185 49.2
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 5.8e-38 161.8 183 47.0
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 5.8e-38 161.8 183 46.4
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 5.8e-38 161.8 183 46.4
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.3e-37 160.6 154 52.6
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 1.7e-37 160.2 158 52.5
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 2.9e-37 159.5 158 50.6
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 2.9e-37 159.5 158 48.1
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 2.9e-37 159.5 200 45.5
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 4.9e-37 158.7 150 54.0
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 1.9e-36 156.8 158 51.3
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 3.2e-36 156.0 199 44.2
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 3.2e-36 156.0 154 53.9
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 7.3e-33 144.8 136 54.4
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 2.6e-22 109.8 196 37.2
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 1.3e-21 107.5 176 38.1
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 6.4e-21 105.1 88 56.8
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 7.1e-20 101.7 100 52.0
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 6.0e-19 98.6 120 45.0
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 1.7e-18 97.1 90 53.3
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 1.5e-17 94.0 100 48.0
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 3.3e-17 92.8 103 49.5
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 3.1e-15 86.3 100 44.0
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 2.9e-13 79.7 200 28.0
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 3.8e-13 79.3 71 54.9
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 6.4e-13 78.6 65 53.8
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 2.4e-12 76.6 151 35.8
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 3.2e-12 76.3 86 45.3
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 2.5e-09 66.6 57 56.1
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 3.3e-09 66.2 57 56.1
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 5.6e-09 65.5 116 35.3
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 1.2e-06 57.8 74 43.2


User provided reference genes

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