Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 1.7e-210 735.7 358 100.0
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 4.7e-80 302.4 259 54.4
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 1.4e-79 300.8 316 48.4
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 1.4e-79 300.8 282 51.1
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 4.0e-79 299.3 271 53.1
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 4.0e-79 299.3 271 53.1
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 4.0e-79 299.3 271 53.1
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 1.2e-78 297.7 259 52.9
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 1.2e-78 297.7 278 51.8
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 3.4e-78 296.2 317 47.0
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 1.3e-77 294.3 273 50.9
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 1.7e-77 293.9 275 51.3
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 2.2e-77 293.5 259 54.4
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 2.2e-77 293.5 276 51.1
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 2.2e-77 293.5 259 51.7
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 2.9e-77 293.1 267 53.2
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 3.7e-77 292.7 271 50.9
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 3.7e-77 292.7 271 50.9
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 3.7e-77 292.7 273 50.9
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 3.7e-77 292.7 249 54.2
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 6.4e-77 292.0 319 46.7
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 8.3e-77 291.6 275 50.9
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 1.1e-76 291.2 281 49.5
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 1.4e-76 290.8 284 49.6
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 2.4e-76 290.0 293 49.1
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 2.4e-76 290.0 281 49.5
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 3.2e-76 289.7 265 52.1
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 3.2e-76 289.7 272 52.9
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 7.0e-76 288.5 292 47.9
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 7.0e-76 288.5 282 50.4
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 2.1e-75 287.0 308 47.4
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 2.7e-75 286.6 283 49.1
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 2.7e-75 286.6 249 53.0
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 3.5e-75 286.2 252 53.2
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 4.6e-75 285.8 291 50.2
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 4.6e-75 285.8 253 52.2
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 6.0e-75 285.4 266 53.0
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 7.8e-75 285.0 250 52.8
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 1.0e-74 284.6 266 51.1
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 1.7e-74 283.9 262 50.0
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 2.3e-74 283.5 307 47.9
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 2.3e-74 283.5 246 53.7
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 2.3e-74 283.5 267 50.9
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 3.0e-74 283.1 267 52.1
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 3.9e-74 282.7 258 49.6
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 3.9e-74 282.7 253 51.4
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 3.9e-74 282.7 281 49.1
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 5.0e-74 282.3 291 48.1
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 6.6e-74 282.0 291 46.7
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 8.6e-74 281.6 262 51.1
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 8.6e-74 281.6 266 51.5
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 8.6e-74 281.6 265 51.3
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 1.9e-73 280.4 257 50.2
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 4.3e-73 279.3 282 47.5
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 4.3e-73 279.3 307 45.0
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 7.3e-73 278.5 284 47.9
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 1.2e-72 277.7 273 49.1
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 2.1e-72 276.9 246 52.8
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 6.2e-72 275.4 304 46.7
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 1.4e-71 274.2 290 46.2
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 1.4e-71 274.2 278 47.5
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 4.0e-71 272.7 262 48.9
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 5.2e-71 272.3 232 53.9
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 5.2e-71 272.3 232 53.9
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 8.9e-71 271.6 285 47.0
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 8.9e-71 271.6 253 51.8
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 8.9e-71 271.6 309 43.7
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 1.2e-70 271.2 313 44.4
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 1.5e-70 270.8 293 47.4
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 4.4e-70 269.2 270 48.5
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 1.3e-69 267.7 260 50.0
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 1.7e-69 267.3 259 49.0
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 2.9e-69 266.5 315 42.5
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 5.4e-68 262.3 278 47.5
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 7.1e-68 261.9 283 45.2
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 1.2e-67 261.2 292 43.2
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 7.8e-67 258.5 365 39.7
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 6.6e-66 255.4 259 48.3
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 8.6e-66 255.0 336 40.8
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 1.9e-65 253.8 301 42.5
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 2.5e-65 253.4 223 52.0
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 2.5e-65 253.4 291 43.3
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 5.6e-65 252.3 255 47.8
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 5.6e-65 252.3 257 46.7
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 9.5e-65 251.5 263 47.1
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 3.4e-62 243.0 278 45.0
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 1.3e-61 241.1 226 50.0
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 4.6e-59 232.6 213 53.1
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 1.5e-57 227.6 227 51.5
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 5.6e-57 225.7 209 49.3
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 9.6e-57 224.9 191 54.5
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 3.6e-56 223.0 308 39.9
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 3.8e-53 213.0 268 41.4
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 1.1e-47 194.9 178 51.7
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 1.8e-47 194.1 173 52.0
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 7.6e-46 188.7 180 49.4
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.7e-45 187.6 194 45.4
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 2.1e-43 180.6 161 51.6
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 1.0e-42 178.3 164 50.0
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 2.8e-40 170.2 253 39.1
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.1e-39 168.3 181 44.2
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 1.9e-36 157.5 134 53.7
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 8.7e-34 148.7 246 34.1
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 9.6e-33 145.2 194 38.7
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.6e-30 137.1 292 29.8
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.6e-30 137.1 292 29.8
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 1.3e-29 134.8 266 34.6
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 8.4e-29 132.1 254 34.6
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 1.2e-27 128.3 152 41.4
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 5.1e-26 122.9 178 41.0
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 3.1e-23 113.6 269 33.1
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 1.3e-21 108.2 124 41.1
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.2e-20 103.2 124 39.5
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.3e-16 91.7 124 38.7
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 2.0e-14 84.3 77 51.9
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 1.3e-13 81.6 128 40.6
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 3.1e-07 60.5 93 33.3


User provided reference genes

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