Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 5.7e-253 877.1 442 100.0
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 6.0e-93 345.5 316 53.2
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 1.4e-81 307.8 309 50.5
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 2.6e-64 250.4 400 37.2
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 5.8e-64 249.2 400 37.0
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 9.3e-62 241.9 307 40.1
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 1.8e-60 237.7 308 39.9
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 3.0e-60 236.9 310 41.0
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 3.0e-60 236.9 308 39.3
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 2.5e-59 233.8 438 35.6
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 2.5e-59 233.8 309 39.8
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 3.3e-59 233.4 309 39.2
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 3.3e-59 233.4 269 41.6
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 4.3e-59 233.0 309 38.2
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 7.4e-59 232.3 300 40.0
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 9.7e-59 231.9 294 40.5
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 9.7e-59 231.9 298 40.3
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 1.3e-58 231.5 298 40.3
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 1.6e-58 231.1 307 39.4
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 2.2e-58 230.7 300 40.3
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 2.2e-58 230.7 309 39.2
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 2.2e-58 230.7 309 39.8
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 3.7e-58 229.9 309 37.9
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 1.4e-57 228.0 304 39.5
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 1.4e-57 228.0 349 36.1
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.4e-57 228.0 309 39.5
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 2.4e-57 227.3 309 39.2
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 2.4e-57 227.3 309 39.5
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 3.1e-57 226.9 308 38.6
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.1e-57 226.9 304 38.5
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 3.1e-57 226.9 309 40.1
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 6.9e-57 225.7 300 37.3
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 9.0e-57 225.3 300 37.3
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 9.0e-57 225.3 300 38.0
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 4.5e-56 223.0 300 38.7
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 4.5e-56 223.0 379 35.6
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 7.7e-56 222.2 313 38.7
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.7e-55 221.1 287 39.7
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 2.2e-55 220.7 298 40.3
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 2.2e-55 220.7 309 37.5
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 2.9e-55 220.3 300 38.7
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 3.8e-55 219.9 307 38.1
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 5.0e-55 219.5 300 38.3
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 5.0e-55 219.5 303 38.3
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 2.5e-54 217.2 372 36.0
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 2.5e-54 217.2 389 35.5
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 2.5e-54 217.2 291 38.5
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 3.2e-54 216.9 399 33.3
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 7.2e-54 215.7 309 37.5
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 7.2e-54 215.7 389 34.7
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 7.2e-54 215.7 300 37.3
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 9.4e-54 215.3 309 37.2
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 1.2e-53 214.9 300 37.3
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 2.7e-53 213.8 311 37.3
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 2.7e-53 213.8 311 37.3
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 3.6e-53 213.4 307 37.8
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 3.6e-53 213.4 289 39.4
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 4.6e-53 213.0 309 37.2
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 4.6e-53 213.0 300 38.0
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 6.1e-53 212.6 294 38.4
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 6.1e-53 212.6 289 38.1
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 7.9e-53 212.2 309 38.8
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 1.0e-52 211.8 311 36.3
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 1.0e-52 211.8 311 37.0
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 1.0e-52 211.8 389 34.2
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 1.4e-52 211.5 373 35.7
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 1.8e-52 211.1 289 37.7
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 3.0e-52 210.3 308 37.3
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 3.9e-52 209.9 309 37.5
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 3.9e-52 209.9 311 36.7
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 5.1e-52 209.5 300 37.7
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 6.7e-52 209.1 309 37.2
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 6.7e-52 209.1 308 37.0
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 1.5e-51 208.0 304 37.5
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 1.5e-51 208.0 309 36.9
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 2.0e-51 207.6 307 37.1
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 2.5e-51 207.2 389 33.7
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 3.3e-51 206.8 304 37.5
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 3.3e-51 206.8 304 37.5
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 3.3e-51 206.8 304 37.5
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 4.3e-51 206.5 389 33.9
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 5.7e-51 206.1 311 36.7
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 7.4e-51 205.7 311 37.3
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 7.4e-51 205.7 304 37.2
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.7e-50 204.5 300 35.3
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 1.7e-50 204.5 300 37.3
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 2.2e-50 204.1 315 38.4
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 4.8e-50 203.0 246 41.1
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 6.3e-50 202.6 295 38.6
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 1.1e-49 201.8 380 34.5
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 6.9e-49 199.1 347 33.4
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 2.0e-48 197.6 394 35.3
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 1.0e-44 185.3 251 38.6
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 3.3e-43 180.3 321 33.6
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 1.3e-39 168.3 214 41.1
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 1.5e-38 164.9 295 33.2
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 9.4e-38 162.2 323 31.6
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 5.7e-35 152.9 236 33.9
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 3.5e-32 143.7 309 31.4
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 5.9e-32 142.9 235 34.0
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 2.2e-31 141.0 304 33.2
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 1.6e-29 134.8 389 29.6
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 5.2e-28 129.8 211 35.5
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 1.7e-23 114.8 149 42.3
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 2.0e-19 101.3 168 33.3
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 2.6e-19 100.9 119 42.9
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 2.6e-19 100.9 119 42.9
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 2.8e-18 97.4 96 49.0
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 4.5e-16 90.1 215 34.4
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 9.5e-14 82.4 132 33.3
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 4.7e-13 80.1 120 33.3
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.5e-11 75.1 119 28.6
Pp3c6_8560 Physcomitrium patens HOM05D000367 ORTHO05D001438 3.2e-09 67.4 74 56.8
Pp3c5_20400 Physcomitrium patens HOM05D000367 ORTHO05D001438 1.7e-07 61.6 82 53.7


User provided reference genes

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