Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_41760 Physcomitrium patens HOM05D005483 ORTHO05D006924 2.9e-199 698.4 354 100.0
Pp3c14_23090 Physcomitrium patens HOM05D005483 ORTHO05D006924 2.5e-81 306.6 626 36.9
Mapoly0029s0137 Marchantia polymorpha HOM05D005483 ORTHO05D006924 1.9e-49 200.7 625 27.4
SEGI_17725 Sequoiadendron giganteum HOM05D005483 ORTHO05D006924 3.3e-41 173.3 653 25.7
AagrBONN_evm.TU.Sc2ySwM_228.3500 Anthoceros agrestis HOM05D005483 ORTHO05D006924 2.0e-38 164.1 179 50.3
ATR0582G070 Amborella trichopoda HOM05D005483 ORTHO05D006924 3.4e-38 163.3 658 24.5
MBI11_g02503_MAGBIO Magnolia biondii HOM05D005483 ORTHO05D006924 2.2e-37 160.6 638 24.6
MD13G1132200 Malus domestica HOM05D005483 ORTHO05D006924 1.1e-36 158.3 605 23.8
Thecc.02G190700 Theobroma cacao HOM05D005483 ORTHO05D006924 1.4e-36 157.9 643 24.9
PSO017G1761 Papaver somniferum HOM05D005483 ORTHO05D006924 5.4e-36 156.0 200 44.0
PSO478G1749 Papaver somniferum HOM05D005483 ORTHO05D006924 5.4e-36 156.0 200 44.0
Gohir.A01G020200 Gossypium hirsutum HOM05D005483 ORTHO05D006924 2.1e-35 154.1 643 23.8
Gohir.D01G018800 Gossypium hirsutum HOM05D005483 ORTHO05D006924 3.5e-35 153.3 643 24.0
TAR622G1101 Trochodendron aralioides HOM05D005483 ORTHO05D006924 3.5e-35 153.3 642 23.5
Gorai.002G021000 Gossypium raimondii HOM05D005483 ORTHO05D006924 1.3e-34 151.4 643 23.8
AUR62028835 Chenopodium quinoa HOM05D005483 ORTHO05D006924 1.7e-34 151.0 203 40.9
HanXRQChr06g0175451 Helianthus annuus HOM05D005483 ORTHO05D006924 1.7e-34 151.0 646 22.9
Ciclev10004203m.g Citrus clementina HOM05D005483 ORTHO05D006924 3.0e-34 150.2 644 23.6
Duzib052G0599 Durio zibethinus HOM05D005483 ORTHO05D006924 6.6e-34 149.1 643 23.6
RcHm_v2.0_Chr4g0428701 Rosa chinensis HOM05D005483 ORTHO05D006924 6.6e-34 149.1 197 40.6
TAR374G0614 Trochodendron aralioides HOM05D005483 ORTHO05D006924 6.6e-34 149.1 637 23.4
CSS0020507 Camellia sinensis var. sinensis HOM05D005483 ORTHO05D006924 8.6e-34 148.7 639 23.3
CiPaw.06G110300 Carya illinoinensis HOM05D005483 ORTHO05D006924 8.6e-34 148.7 663 23.1
SMO116G0229 Selaginella moellendorffii HOM05D005483 ORTHO05D006924 8.6e-34 148.7 650 23.5
HPP92_020112 Vanilla planifolia HOM05D005483 ORTHO05D006924 8.6e-34 148.7 632 23.6
Sc11g0000050 Simmondsia chinensis HOM05D005483 ORTHO05D006924 1.1e-33 148.3 640 23.0
Peaxi162Scf00842g00430 Petunia axillaris HOM05D005483 ORTHO05D006924 1.5e-33 147.9 645 22.9
PGR119G2201 Punica granatum HOM05D005483 ORTHO05D006924 1.9e-33 147.5 645 23.1
HanXRQChr17g0540341 Helianthus annuus HOM05D005483 ORTHO05D006924 2.5e-33 147.1 204 39.7
Hma1.2p1_1494F.1_g286890 Hydrangea macrophylla HOM05D005483 ORTHO05D006924 3.3e-33 146.7 643 23.2
Aqoxy5G03055 Aquilegia oxysepala HOM05D005483 ORTHO05D006924 4.3e-33 146.4 642 23.2
Cpa.g.sc38.68 Carica papaya HOM05D005483 ORTHO05D006924 4.3e-33 146.4 200 39.0
EL10Ac2g02397 Beta vulgaris HOM05D005483 ORTHO05D006924 5.6e-33 146.0 200 40.5
AUR62005722 Chenopodium quinoa HOM05D005483 ORTHO05D006924 5.6e-33 146.0 203 39.9
CsaV3_4G002140 Cucumis sativus L. HOM05D005483 ORTHO05D006924 5.6e-33 146.0 666 23.1
CANSAT01G1825 Cannabis sativa HOM05D005483 ORTHO05D006924 7.3e-33 145.6 204 39.7
Rhsim12G0016200 Rhododendron simsii HOM05D005483 ORTHO05D006924 7.3e-33 145.6 643 22.9
TWI36G1286 Tripterygium wilfordii HOM05D005483 ORTHO05D006924 7.3e-33 145.6 185 43.8
Actinidia30577 Actinidia chinensis HOM05D005483 ORTHO05D006924 9.5e-33 145.2 642 22.9
SalBow2G2141 Salvia bowleyana HOM05D005483 ORTHO05D006924 9.5e-33 145.2 200 41.5
MELO3C017824.2 Cucumis melo HOM05D005483 ORTHO05D006924 1.2e-32 144.8 666 23.1
TWI18G1022 Tripterygium wilfordii HOM05D005483 ORTHO05D006924 1.6e-32 144.4 643 23.3
Potri.003G161400 Populus trichocarpa HOM05D005483 ORTHO05D006924 2.1e-32 144.1 640 23.1
Cc11_g14910 Coffea canephora HOM05D005483 ORTHO05D006924 2.8e-32 143.7 202 39.1
Os11g0528200 Oryza sativa ssp. japonica HOM05D005483 ORTHO05D006924 2.8e-32 143.7 180 46.7
QL03p048748 Quercus lobata HOM05D005483 ORTHO05D006924 2.8e-32 143.7 183 42.1
Solyc11g033282.1 Solanum lycopersicum HOM05D005483 ORTHO05D006924 2.8e-32 143.7 644 22.4
Sopen11g017110 Solanum pennellii HOM05D005483 ORTHO05D006924 2.8e-32 143.7 644 22.4
MSTRG.445 Avicennia marina HOM05D005483 ORTHO05D006924 3.6e-32 143.3 666 22.4
Dinv17529 Davidia involucrata HOM05D005483 ORTHO05D006924 3.6e-32 143.3 643 22.7
Manes.08G100200 Manihot esculenta HOM05D005483 ORTHO05D006924 3.6e-32 143.3 643 23.0
SGA_v2.0_scaffold258G45771 Striga asiatica HOM05D005483 ORTHO05D006924 3.6e-32 143.3 663 22.0
vmacro01010 Vaccinium macrocarpon HOM05D005483 ORTHO05D006924 4.7e-32 142.9 643 22.6
FAN07G1779 Fragaria x ananassa HOM05D005483 ORTHO05D006924 6.2e-32 142.5 643 23.0
Nn3g16247 Nelumbo nucifera HOM05D005483 ORTHO05D006924 6.2e-32 142.5 639 22.5
ECA246G4063 Erigeron canadensis HOM05D005483 ORTHO05D006924 8.1e-32 142.1 641 23.1
FAN17G2071 Fragaria x ananassa HOM05D005483 ORTHO05D006924 8.1e-32 142.1 643 22.9
Migut.K01044 Erythranthe guttata HOM05D005483 ORTHO05D006924 1.1e-31 141.7 666 22.2
Sabra03G0117300 Salix brachista HOM05D005483 ORTHO05D006924 1.1e-31 141.7 640 22.7
FvH4_4g22440 Fragaria vesca HOM05D005483 ORTHO05D006924 1.4e-31 141.4 643 22.9
FAN12G1583 Fragaria x ananassa HOM05D005483 ORTHO05D006924 1.4e-31 141.4 643 22.9
MSTRG.8060 Avicennia marina HOM05D005483 ORTHO05D006924 1.8e-31 141.0 642 23.1
Prupe.1G213300 Prunus persica HOM05D005483 ORTHO05D006924 1.8e-31 141.0 643 22.4
Haze_12514 Corylus avellana HOM05D005483 ORTHO05D006924 2.3e-31 140.6 641 23.7
Lj6C839G6 Lonicera japonica HOM05D005483 ORTHO05D006924 2.3e-31 140.6 648 22.7
GSVIVG01001111001 Vitis vinifera HOM05D005483 ORTHO05D006924 2.3e-31 140.6 635 22.7
Ah.03g135500 Amaranthus hybridus HOM05D005483 ORTHO05D006924 3.1e-31 140.2 183 42.6
Sed0017746 Sechium edule HOM05D005483 ORTHO05D006924 3.1e-31 140.2 667 22.8
Nn4g22102 Nelumbo nucifera HOM05D005483 ORTHO05D006924 4.0e-31 139.8 639 22.7
Sed0020947 Sechium edule HOM05D005483 ORTHO05D006924 4.0e-31 139.8 667 22.6
Lsat_1_v5_gn_3_32540 Lactuca sativa HOM05D005483 ORTHO05D006924 6.8e-31 139.0 643 23.2
Cfa009459 Carpinus fangiana HOM05D005483 ORTHO05D006924 8.9e-31 138.7 641 23.7
DCAR_026441 Daucus carota HOM05D005483 ORTHO05D006924 1.2e-30 138.3 197 39.1
Eucgr.G01983 Eucalyptus grandis HOM05D005483 ORTHO05D006924 1.5e-30 137.9 186 40.9
Potri.001G068900 Populus trichocarpa HOM05D005483 ORTHO05D006924 2.0e-30 137.5 640 23.4
SEGI_02355 Sequoiadendron giganteum HOM05D005483 ORTHO05D006924 3.4e-30 136.7 113 60.2
Sabra01G0048200 Salix brachista HOM05D005483 ORTHO05D006924 4.4e-30 136.3 640 23.6
Duzib248G1306 Durio zibethinus HOM05D005483 ORTHO05D006924 5.8e-30 136.0 216 37.0
MD16G1142500 Malus domestica HOM05D005483 ORTHO05D006924 5.8e-30 136.0 643 22.7
unitig_22.g6373 Utricularia gibba HOM05D005483 ORTHO05D006924 9.9e-30 135.2 169 43.8
Lj1g0002578 Lotus japonicus HOM05D005483 ORTHO05D006924 2.2e-29 134.0 642 22.4
Lalb_Chr10g0091131 Lupinus albus HOM05D005483 ORTHO05D006924 2.2e-29 134.0 644 22.0
Actinidia22109 Actinidia chinensis HOM05D005483 ORTHO05D006924 3.7e-29 133.3 182 40.1
Psat3g206760 Pisum sativum HOM05D005483 ORTHO05D006924 6.4e-29 132.5 193 37.8
Ca_04087_v3 Cicer arietinum L. HOM05D005483 ORTHO05D006924 8.3e-29 132.1 193 37.3
BcaC04g19119 Brassica carinata HOM05D005483 ORTHO05D006924 1.1e-28 131.7 638 22.9
ClCG07G012020 Citrullus lanatus HOM05D005483 ORTHO05D006924 2.4e-28 130.6 650 22.6
Phvul.008G003900 Phaseolus vulgaris HOM05D005483 ORTHO05D006924 5.4e-28 129.4 643 21.9
Glyma.08G363300 Glycine max HOM05D005483 ORTHO05D006924 9.2e-28 128.6 643 21.9
BcaNung01880 Brassica carinata HOM05D005483 ORTHO05D006924 1.2e-27 128.3 666 22.4
A02p01880 Brassica napus HOM05D005483 ORTHO05D006924 1.6e-27 127.9 666 22.4
BraA02t05161Z Brassica rapa HOM05D005483 ORTHO05D006924 1.6e-27 127.9 666 22.4
BcaNung01159 Brassica carinata HOM05D005483 ORTHO05D006924 2.7e-27 127.1 666 22.2
Glyma.18G298700 Glycine max HOM05D005483 ORTHO05D006924 2.7e-27 127.1 643 21.9
BolC2t06551H Brassica oleracea HOM05D005483 ORTHO05D006924 3.5e-27 126.7 666 22.2
C02p06100 Brassica napus HOM05D005483 ORTHO05D006924 4.6e-27 126.3 666 22.2
C09p63680 Brassica napus HOM05D005483 ORTHO05D006924 4.6e-27 126.3 669 22.4
AL6G24010 Arabidopsis lyrata HOM05D005483 ORTHO05D006924 7.8e-27 125.6 667 21.9
AT5G13390 Arabidopsis thaliana HOM05D005483 ORTHO05D006924 1.0e-26 125.2 667 21.9
arahy.Tifrunner.gnm1.ann1.H63XD7 Arachis hypogaea HOM05D005483 ORTHO05D006924 1.3e-26 124.8 648 21.3
arahy.Tifrunner.gnm1.ann1.N4LA1V Arachis hypogaea HOM05D005483 ORTHO05D006924 1.3e-26 124.8 648 21.3
Aa31LG3G14260 Aethionema arabicum HOM05D005483 ORTHO05D006924 1.7e-26 124.4 669 22.1
Carub.0006s1155 Capsella rubella HOM05D005483 ORTHO05D006924 1.7e-26 124.4 667 21.3
CARHR200040 Cardamine hirsuta HOM05D005483 ORTHO05D006924 3.0e-26 123.6 665 21.5
A10p24830 Brassica napus HOM05D005483 ORTHO05D006924 3.9e-26 123.2 669 22.0
BraA10t44547Z Brassica rapa HOM05D005483 ORTHO05D006924 3.9e-26 123.2 669 22.0
Thhalv10012499m.g Eutrema salsugineum HOM05D005483 ORTHO05D006924 3.9e-26 123.2 667 21.7
Sp6g30630 Schrenkiella parvula HOM05D005483 ORTHO05D006924 6.6e-26 122.5 667 21.7
TPR.G9702 Trifolium pratense HOM05D005483 ORTHO05D006924 6.6e-26 122.5 643 21.3
BolC9t59209H Brassica oleracea HOM05D005483 ORTHO05D006924 1.5e-25 121.3 669 21.8
THA.LOC104825454 Tarenaya hassleriana HOM05D005483 ORTHO05D006924 1.9e-25 120.9 665 22.0
VMungo1383G1684 Vigna mungo HOM05D005483 ORTHO05D006924 4.3e-25 119.8 597 21.4
Medtr7g006760 Medicago truncatula HOM05D005483 ORTHO05D006924 5.6e-25 119.4 644 21.6
Medtr7g406760 Medicago truncatula HOM05D005483 ORTHO05D006924 5.6e-25 119.4 644 21.6
CBR_g38877 Chara braunii HOM05D005483 ORTHO05D006924 3.1e-23 113.6 184 42.9
Zm00001eb113290 Zea mays HOM05D005483 ORTHO05D006924 3.4e-22 110.2 205 33.7
COL.COLO4_08434 Corchorus olitorius HOM05D005483 ORTHO05D006924 2.4e-20 104.0 204 34.3
CSS0027672 Camellia sinensis var. sinensis HOM05D005483 ORTHO05D006924 3.2e-20 103.6 204 32.8
Atru.chr12.1443 Acer truncatum HOM05D005483 ORTHO05D006924 3.5e-19 100.1 202 33.7
Nitab4.5_0002569g0090 Nicotiana tabacum HOM05D005483 ORTHO05D006924 5.3e-15 86.3 135 35.6
RcHm_v2.0_Chr4g0402251 Rosa chinensis HOM05D005483 ORTHO05D006924 2.6e-14 84.0 204 30.9
CDE05G0204 Ceratophyllum demersum HOM05D005483 ORTHO05D006924 1.1e-12 78.6 205 29.3


User provided reference genes

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