Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.7e-122 442.6 212 100.0
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.1e-52 210.7 202 52.0
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 8.5e-45 184.5 161 55.9
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 9.4e-44 181.0 173 49.7
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 1.2e-43 180.6 199 48.2
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 1.6e-43 180.3 161 52.8
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 7.9e-43 177.9 162 52.5
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 1.0e-42 177.6 165 51.5
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 3.9e-42 175.6 165 50.3
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 3.9e-42 175.6 161 53.4
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 5.1e-42 175.3 159 51.6
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 6.7e-42 174.9 169 49.1
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 1.5e-41 173.7 169 49.7
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 2.6e-41 172.9 171 50.9
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 2.6e-41 172.9 161 50.3
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 2.6e-41 172.9 162 50.6
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 2.6e-41 172.9 161 50.9
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 3.3e-41 172.6 171 48.0
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 3.3e-41 172.6 161 50.3
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 4.4e-41 172.2 157 52.2
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 4.4e-41 172.2 161 49.7
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 4.4e-41 172.2 161 49.7
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 5.7e-41 171.8 171 48.0
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 5.7e-41 171.8 169 49.1
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 7.4e-41 171.4 159 51.6
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 7.4e-41 171.4 159 49.7
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 7.4e-41 171.4 169 49.1
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 7.4e-41 171.4 161 51.6
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 9.7e-41 171.0 161 50.3
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 1.7e-40 170.2 161 50.3
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 1.7e-40 170.2 161 50.9
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 2.2e-40 169.9 169 49.7
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 2.8e-40 169.5 161 49.1
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 2.8e-40 169.5 161 48.4
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 3.7e-40 169.1 169 50.3
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 4.8e-40 168.7 161 52.2
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 6.3e-40 168.3 171 48.5
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 6.3e-40 168.3 171 48.5
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 8.2e-40 167.9 161 48.4
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 1.8e-39 166.8 161 49.1
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 2.4e-39 166.4 161 49.1
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 2.4e-39 166.4 161 46.6
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 2.4e-39 166.4 161 49.1
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 2.4e-39 166.4 159 49.7
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 3.1e-39 166.0 169 49.1
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 3.1e-39 166.0 161 49.7
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.3e-39 165.2 161 48.4
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 7.0e-39 164.9 172 48.8
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 7.0e-39 164.9 171 47.4
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 9.1e-39 164.5 159 49.1
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 9.1e-39 164.5 172 46.5
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 9.1e-39 164.5 159 50.9
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 9.1e-39 164.5 165 50.9
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.2e-38 164.1 161 48.4
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.2e-38 164.1 161 48.4
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 1.2e-38 164.1 169 46.7
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 2.0e-38 163.3 157 49.7
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 2.0e-38 163.3 161 48.4
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 2.0e-38 163.3 184 45.1
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 2.0e-38 163.3 161 48.4
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 3.5e-38 162.5 157 48.4
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 3.5e-38 162.5 161 47.8
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 4.5e-38 162.2 169 46.2
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 4.5e-38 162.2 169 46.2
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 4.5e-38 162.2 170 47.1
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 7.7e-38 161.4 161 44.7
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 7.7e-38 161.4 156 48.1
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 1.0e-37 161.0 171 46.2
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 1.3e-37 160.6 159 47.8
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 3.8e-37 159.1 152 50.0
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 5.0e-37 158.7 189 43.9
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 5.0e-37 158.7 169 46.7
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 6.5e-37 158.3 172 47.1
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 6.5e-37 158.3 170 45.9
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 1.1e-36 157.5 170 45.3
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 1.5e-36 157.1 161 46.6
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 1.5e-36 157.1 172 45.9
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 2.5e-36 156.4 171 47.4
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 4.2e-36 155.6 157 46.5
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 7.2e-36 154.8 152 49.3
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 9.4e-36 154.5 152 48.7
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 1.2e-35 154.1 161 45.3
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 2.1e-35 153.3 156 46.8
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 2.1e-35 153.3 169 45.6
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 3.6e-35 152.5 170 45.9
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 6.1e-35 151.8 161 44.7
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 1.4e-34 150.6 147 53.7
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 3.0e-34 149.4 156 46.2
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 4.0e-34 149.1 145 53.1
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 2.0e-33 146.7 152 48.7
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 2.0e-33 146.7 160 47.5
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 2.6e-33 146.4 152 46.7
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 3.3e-33 146.0 158 44.9
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 3.3e-33 146.0 158 44.9
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 5.7e-33 145.2 161 46.0
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 3.7e-32 142.5 163 44.2
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 6.3e-32 141.7 145 49.0
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 1.8e-31 140.2 160 43.1
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 1.8e-31 140.2 165 43.6
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 9.1e-31 137.9 167 40.7
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 1.2e-30 137.5 129 50.4
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 3.5e-30 136.0 170 44.1
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 1.0e-29 134.4 129 49.6
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 2.2e-29 133.3 165 43.0
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 3.8e-29 132.5 147 46.3
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 5.0e-29 132.1 155 42.6
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 3.6e-27 125.9 130 47.7
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.4e-26 124.0 157 40.8
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 2.3e-26 123.2 164 43.9
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 8.8e-26 121.3 126 47.6
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 8.5e-21 104.8 119 39.5
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 2.7e-19 99.8 106 48.1
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.7e-16 90.5 164 32.3
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.3e-13 80.9 85 47.1
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 3.6e-11 72.8 88 42.0
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 1.8e-10 70.5 94 37.2
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 1.3e-08 64.3 52 55.8
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 3.5e-06 56.2 50 52.0


User provided reference genes

Program Settings