Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 2.3e-165 585.5 296 100.0
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 1.3e-83 313.9 192 75.5
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 4.9e-83 312.0 259 61.4
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 1.6e-81 307.0 193 74.6
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 2.7e-81 306.2 285 58.2
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 2.7e-81 306.2 194 74.7
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 6.0e-81 305.1 196 74.0
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 6.0e-81 305.1 256 60.5
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 1.0e-80 304.3 265 59.6
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 1.3e-80 303.9 277 59.6
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 8.7e-80 301.2 237 62.4
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 8.7e-80 301.2 197 73.1
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 8.7e-80 301.2 260 60.4
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 1.1e-79 300.8 199 71.4
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 1.5e-79 300.4 199 72.4
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 1.5e-79 300.4 197 74.1
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 2.5e-79 299.7 236 64.8
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 3.3e-79 299.3 193 73.6
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 4.3e-79 298.9 259 60.2
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 5.6e-79 298.5 193 74.1
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 7.4e-79 298.1 216 69.4
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 1.3e-78 297.4 226 66.8
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 1.6e-78 297.0 200 70.5
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 1.6e-78 297.0 196 71.9
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 4.8e-78 295.4 228 63.6
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 4.8e-78 295.4 195 72.8
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 4.8e-78 295.4 237 62.9
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 6.2e-78 295.0 201 70.6
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 6.2e-78 295.0 201 70.6
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 6.2e-78 295.0 216 66.7
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 1.1e-77 294.3 195 72.3
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.1e-77 294.3 267 58.4
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.1e-77 294.3 244 61.5
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 1.4e-77 293.9 274 56.9
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 1.8e-77 293.5 266 56.8
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 2.4e-77 293.1 229 64.6
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 2.4e-77 293.1 240 59.6
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 2.4e-77 293.1 252 59.1
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 2.4e-77 293.1 277 57.0
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 5.3e-77 292.0 199 70.9
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 5.3e-77 292.0 252 59.1
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 6.9e-77 291.6 203 68.0
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 6.9e-77 291.6 277 57.0
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 9.0e-77 291.2 202 70.8
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 9.0e-77 291.2 195 69.7
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.2e-76 290.8 197 71.6
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 1.2e-76 290.8 265 56.2
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 1.2e-76 290.8 237 61.2
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 1.5e-76 290.4 219 64.8
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 2.0e-76 290.0 266 56.0
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 2.0e-76 290.0 228 63.2
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 2.0e-76 290.0 194 71.6
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 3.4e-76 289.3 226 62.8
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 3.4e-76 289.3 224 62.5
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 5.8e-76 288.5 200 69.0
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 9.9e-76 287.7 270 54.8
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 9.9e-76 287.7 203 67.5
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 1.7e-75 287.0 218 62.8
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 1.7e-75 287.0 226 62.8
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 2.2e-75 286.6 267 56.9
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 2.2e-75 286.6 243 60.5
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 2.9e-75 286.2 199 69.3
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 3.8e-75 285.8 267 55.8
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 8.4e-75 284.6 198 69.2
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 8.4e-75 284.6 242 60.7
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 1.4e-74 283.9 207 66.2
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 1.4e-74 283.9 251 57.4
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 1.4e-74 283.9 267 56.9
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 2.4e-74 283.1 268 56.0
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.4e-74 283.1 205 68.8
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 4.2e-74 282.3 199 64.8
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 4.2e-74 282.3 259 56.8
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 5.5e-74 282.0 250 58.0
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 7.1e-74 281.6 195 69.7
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 1.2e-73 280.8 198 68.2
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 1.2e-73 280.8 284 54.2
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 1.6e-73 280.4 282 54.3
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 4.6e-73 278.9 207 65.2
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 7.9e-73 278.1 239 60.3
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 1.3e-72 277.3 251 57.8
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 1.3e-72 277.3 251 57.8
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 2.3e-72 276.6 246 58.5
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 3.0e-72 276.2 225 62.7
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 1.1e-69 267.7 199 68.3
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 3.1e-69 266.2 225 60.0
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.4e-66 257.3 260 52.7
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 5.5e-66 255.4 255 53.3
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 7.1e-66 255.0 201 63.7
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.3e-64 250.8 173 70.5
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 2.3e-64 250.0 197 64.0
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 2.0e-60 236.9 166 67.5
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 5.9e-60 235.3 359 41.2
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 1.0e-59 234.6 166 68.1
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 6.5e-59 231.9 160 68.8
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 8.5e-59 231.5 231 55.8
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 1.3e-56 224.2 189 59.3
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 1.5e-55 220.7 154 70.1
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.8e-45 187.2 127 71.7
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 1.5e-44 184.1 120 75.0
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 5.0e-43 179.1 127 68.5
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 5.0e-43 179.1 123 70.7
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 1.1e-39 167.9 170 53.5
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 1.3e-38 164.5 105 73.3
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 2.2e-38 163.7 182 51.1
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 1.6e-36 157.5 173 48.6
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 4.2e-34 149.4 107 68.2
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 4.7e-33 146.0 218 45.9
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 4.4e-31 139.4 220 40.0
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 4.5e-28 129.4 93 65.6
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 1.8e-24 117.5 72 73.6
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.2e-23 114.8 81 65.4
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 8.3e-22 108.6 94 60.6
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 2.9e-19 100.1 72 63.9
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.0e-08 65.1 96 38.5
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-07 58.9 44 68.2


User provided reference genes

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