Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 2.6e-261 904.8 446 100.0
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 6.3e-159 564.7 444 62.2
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.8e-158 563.1 435 63.4
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 6.0e-125 451.8 404 55.0
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 9.6e-123 444.5 402 55.2
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 4.8e-122 442.2 414 54.1
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 8.1e-122 441.4 405 54.1
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 1.4e-121 440.7 380 56.1
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.8e-121 440.3 414 55.6
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 2.4e-121 439.9 390 55.4
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 4.0e-121 439.1 407 54.5
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 5.3e-121 438.7 385 56.1
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 5.3e-121 438.7 405 53.8
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.2e-120 437.6 414 55.1
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 1.5e-120 437.2 425 52.2
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.0e-120 436.8 411 55.5
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 2.6e-120 436.4 390 55.1
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 3.4e-120 436.0 380 56.3
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 7.6e-120 434.9 398 55.0
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 7.6e-120 434.9 407 55.0
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 9.9e-120 434.5 381 55.1
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 9.9e-120 434.5 426 51.9
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 9.9e-120 434.5 386 55.4
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 1.3e-119 434.1 395 54.4
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.3e-119 434.1 419 52.0
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.7e-119 433.7 417 53.0
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.7e-119 433.7 402 54.5
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.2e-119 433.3 380 55.8
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 2.9e-119 433.0 398 55.3
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 3.8e-119 432.6 393 53.9
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 3.8e-119 432.6 416 52.9
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 3.8e-119 432.6 407 53.8
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 4.9e-119 432.2 449 51.0
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 8.4e-119 431.4 385 54.5
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 8.4e-119 431.4 380 55.3
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 1.4e-118 430.6 397 54.7
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 2.4e-118 429.9 404 53.5
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 5.4e-118 428.7 404 53.2
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 1.2e-117 427.6 446 50.4
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 1.2e-117 427.6 380 55.0
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.6e-117 427.2 380 55.0
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.6e-117 427.2 380 55.0
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.6e-117 427.2 402 54.0
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 2.1e-117 426.8 437 51.7
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 2.1e-117 426.8 408 52.2
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.1e-117 426.8 380 55.0
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.1e-117 426.8 380 55.0
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 2.1e-117 426.8 434 51.4
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 2.7e-117 426.4 400 53.0
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 3.5e-117 426.0 384 53.4
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 6.0e-117 425.2 380 54.7
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 6.0e-117 425.2 401 53.9
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 6.0e-117 425.2 405 52.3
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 1.0e-116 424.5 383 54.0
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.0e-116 424.5 409 52.8
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 1.3e-116 424.1 403 52.9
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 1.3e-116 424.1 380 54.2
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 1.7e-116 423.7 427 51.1
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 1.7e-116 423.7 379 54.6
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 2.3e-116 423.3 412 53.6
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 3.0e-116 422.9 380 54.7
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 3.0e-116 422.9 380 53.9
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 5.1e-116 422.2 395 53.2
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 5.1e-116 422.2 411 51.6
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 6.6e-116 421.8 400 52.2
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 8.7e-116 421.4 400 52.2
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 8.7e-116 421.4 416 52.6
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 1.1e-115 421.0 381 53.5
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 1.1e-115 421.0 381 53.5
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 1.9e-115 420.2 381 53.3
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 2.5e-115 419.9 413 51.8
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 3.3e-115 419.5 403 52.1
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 4.3e-115 419.1 388 52.8
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 7.3e-115 418.3 404 52.2
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 1.3e-114 417.5 414 52.2
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 2.8e-114 416.4 413 51.3
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 3.6e-114 416.0 413 51.3
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.6e-114 416.0 392 53.1
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 3.6e-114 416.0 408 51.0
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 4.8e-114 415.6 395 52.7
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 6.2e-114 415.2 407 52.1
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 8.1e-114 414.8 380 53.9
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 8.1e-114 414.8 380 53.9
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 1.1e-113 414.5 403 51.4
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 1.4e-113 414.1 406 51.5
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 3.1e-113 412.9 451 49.4
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 3.1e-113 412.9 392 52.3
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 1.5e-112 410.6 390 51.8
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 1.7e-111 407.1 422 50.7
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 6.4e-111 405.2 364 55.5
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 1.9e-110 403.7 467 46.0
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 5.4e-110 402.1 432 48.6
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 3.0e-108 396.4 357 54.9
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 7.4e-107 391.7 380 51.8
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 1.6e-106 390.6 435 47.1
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 4.8e-106 389.0 406 48.3
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.4e-105 387.5 402 50.0
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 1.5e-104 384.0 404 49.3
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 3.4e-104 382.9 422 47.6
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 1.0e-103 381.3 382 48.7
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 8.4e-103 378.3 285 61.4
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 4.6e-101 372.5 309 56.6
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 6.0e-101 372.1 407 45.7
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 6.7e-100 368.6 415 47.5
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 6.7e-100 368.6 390 47.9
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 1.9e-94 350.5 336 51.8
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.4e-89 334.3 400 45.0
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 5.9e-72 275.8 257 51.4
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 1.3e-39 168.3 120 61.7
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 8.6e-39 165.6 130 59.2
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 8.9e-28 129.0 357 27.5
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 3.2e-25 120.6 148 42.6
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 7.6e-11 72.8 102 36.3
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 8.4e-10 69.3 48 66.7
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 8.4e-10 69.3 70 38.6
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 1.3e-07 62.0 70 31.4
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 7.3e-06 56.2 53 49.1


User provided reference genes

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