Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_40870 Physcomitrium patens HOM05D007131 ORTHO05D009026 2.5e-220 768.5 386 100.0
AagrBONN_evm.TU.Sc2ySwM_368.401 Anthoceros agrestis HOM05D007131 ORTHO05D009026 6.1e-49 199.1 388 37.1
DCAR_004756 Daucus carota HOM05D007131 ORTHO05D009026 1.1e-47 194.9 140 65.0
CANSAT01G0405 Cannabis sativa HOM05D007131 ORTHO05D009026 5.3e-45 186.0 145 63.4
ATR1149G002 Amborella trichopoda HOM05D007131 ORTHO05D009026 1.2e-44 184.9 137 63.5
Eucgr.H00746 Eucalyptus grandis HOM05D007131 ORTHO05D009026 1.5e-44 184.5 138 64.5
Prupe.8G193200 Prunus persica HOM05D007131 ORTHO05D009026 2.0e-44 184.1 138 64.5
FvH4_2g18050 Fragaria vesca HOM05D007131 ORTHO05D009026 4.5e-44 183.0 137 64.2
TAR362G0782 Trochodendron aralioides HOM05D007131 ORTHO05D009026 4.5e-44 183.0 136 63.2
Actinidia09448 Actinidia chinensis HOM05D007131 ORTHO05D009026 7.7e-44 182.2 181 50.3
Carub.0008s0817 Capsella rubella HOM05D007131 ORTHO05D009026 1.0e-43 181.8 138 63.8
Potri.002G248800 Populus trichocarpa HOM05D007131 ORTHO05D009026 1.0e-43 181.8 138 64.5
RcHm_v2.0_Chr6g0283441 Rosa chinensis HOM05D007131 ORTHO05D009026 1.3e-43 181.4 142 61.3
THA.LOC104802654 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 1.7e-43 181.0 138 62.3
AL8G21510 Arabidopsis lyrata HOM05D007131 ORTHO05D009026 2.2e-43 180.6 138 63.0
MD10G1154300 Malus domestica HOM05D007131 ORTHO05D009026 2.9e-43 180.3 142 62.0
MD05G1165000 Malus domestica HOM05D007131 ORTHO05D009026 3.8e-43 179.9 142 61.3
THA.LOC104818990 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 5.0e-43 179.5 139 62.6
SMO201G0137 Selaginella moellendorffii HOM05D007131 ORTHO05D009026 6.5e-43 179.1 116 67.2
Sc24g0003400 Simmondsia chinensis HOM05D007131 ORTHO05D009026 6.5e-43 179.1 145 57.9
Actinidia23782 Actinidia chinensis HOM05D007131 ORTHO05D009026 8.5e-43 178.7 140 58.6
CiPaw.14G041500 Carya illinoinensis HOM05D007131 ORTHO05D009026 8.5e-43 178.7 141 62.4
Ciclev10032761m.g Citrus clementina HOM05D007131 ORTHO05D009026 1.1e-42 178.3 150 59.3
Sabra02G0189500 Salix brachista HOM05D007131 ORTHO05D009026 1.1e-42 178.3 138 62.3
A06p39100 Brassica napus HOM05D007131 ORTHO05D009026 2.5e-42 177.2 136 61.8
Cfa010368 Carpinus fangiana HOM05D007131 ORTHO05D009026 2.5e-42 177.2 142 59.9
Migut.N00650 Erythranthe guttata HOM05D007131 ORTHO05D009026 3.2e-42 176.8 137 61.3
MSTRG.12759 Avicennia marina HOM05D007131 ORTHO05D009026 4.2e-42 176.4 138 60.1
Gohir.A11G141300 Gossypium hirsutum HOM05D007131 ORTHO05D009026 4.2e-42 176.4 136 60.3
PSO675G2392 Papaver somniferum HOM05D007131 ORTHO05D009026 4.2e-42 176.4 184 45.7
BcaC06g30783 Brassica carinata HOM05D007131 ORTHO05D009026 5.5e-42 176.0 136 62.5
FAN15G1265 Fragaria x ananassa HOM05D007131 ORTHO05D009026 5.5e-42 176.0 149 59.7
Os12g0233300 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 5.5e-42 176.0 145 55.9
C07p39240 Brassica napus HOM05D007131 ORTHO05D009026 7.2e-42 175.6 136 61.8
Gorai.007G158200 Gossypium raimondii HOM05D007131 ORTHO05D009026 7.2e-42 175.6 136 59.6
BolC7t44444H Brassica oleracea HOM05D007131 ORTHO05D009026 9.4e-42 175.3 136 61.8
EL10Ac7g17974 Beta vulgaris HOM05D007131 ORTHO05D009026 1.2e-41 174.9 136 59.6
Rhsim01G0249500 Rhododendron simsii HOM05D007131 ORTHO05D009026 1.2e-41 174.9 142 58.5
Thecc.01G214300 Theobroma cacao HOM05D007131 ORTHO05D009026 1.2e-41 174.9 176 53.4
HPP92_007612 Vanilla planifolia HOM05D007131 ORTHO05D009026 1.2e-41 174.9 138 58.0
BcaB04g19580 Brassica carinata HOM05D007131 ORTHO05D009026 1.6e-41 174.5 136 61.8
BcaC04g23770 Brassica carinata HOM05D007131 ORTHO05D009026 1.6e-41 174.5 136 61.8
C09p04870 Brassica napus HOM05D007131 ORTHO05D009026 1.6e-41 174.5 136 61.8
arahy.Tifrunner.gnm1.ann1.4977NQ Arachis hypogaea HOM05D007131 ORTHO05D009026 2.1e-41 174.1 138 60.1
CAN.G181.37 Capsicum annuum HOM05D007131 ORTHO05D009026 2.1e-41 174.1 138 62.3
Aqoxy2G04077 Aquilegia oxysepala HOM05D007131 ORTHO05D009026 2.7e-41 173.7 141 56.0
Dinv22999 Davidia involucrata HOM05D007131 ORTHO05D009026 2.7e-41 173.7 136 60.3
CBR_g28074 Chara braunii HOM05D007131 ORTHO05D009026 3.6e-41 173.3 144 56.9
Medtr7g053220 Medicago truncatula HOM05D007131 ORTHO05D009026 3.6e-41 173.3 120 65.8
Sp2g18910 Schrenkiella parvula HOM05D007131 ORTHO05D009026 3.6e-41 173.3 136 60.3
PSO017G7069 Papaver somniferum HOM05D007131 ORTHO05D009026 4.7e-41 172.9 185 46.5
QL09p048363 Quercus lobata HOM05D007131 ORTHO05D009026 6.1e-41 172.6 137 62.0
TPR.G26850 Trifolium pratense HOM05D007131 ORTHO05D009026 6.1e-41 172.6 119 65.5
Hma1.2p1_1492F.1_g286770 Hydrangea macrophylla HOM05D007131 ORTHO05D009026 1.0e-40 171.8 138 58.7
Lj1g0012821 Lotus japonicus HOM05D007131 ORTHO05D009026 1.0e-40 171.8 128 63.3
Duzib138G1926 Durio zibethinus HOM05D007131 ORTHO05D009026 1.4e-40 171.4 191 50.3
ClCG09G007600 Citrullus lanatus HOM05D007131 ORTHO05D009026 1.8e-40 171.0 191 49.2
Lalb_Chr13g0291041 Lupinus albus HOM05D007131 ORTHO05D009026 1.8e-40 171.0 136 58.1
CBR_g41484 Chara braunii HOM05D007131 ORTHO05D009026 2.3e-40 170.6 202 47.0
Haze_03320 Corylus avellana HOM05D007131 ORTHO05D009026 2.3e-40 170.6 156 55.1
Duzib211G0587 Durio zibethinus HOM05D007131 ORTHO05D009026 2.3e-40 170.6 136 59.6
vmacro14706 Vaccinium macrocarpon HOM05D007131 ORTHO05D009026 3.0e-40 170.2 174 50.0
SGA_v2.0_scaffold77G25283 Striga asiatica HOM05D007131 ORTHO05D009026 5.1e-40 169.5 137 59.9
MELO3C015773.2 Cucumis melo HOM05D007131 ORTHO05D009026 6.7e-40 169.1 197 47.2
Glyma.08G345600 Glycine max HOM05D007131 ORTHO05D009026 6.7e-40 169.1 133 61.7
Nitab4.5_0000040g0390 Nicotiana tabacum HOM05D007131 ORTHO05D009026 6.7e-40 169.1 138 59.4
Sed0006902 Sechium edule HOM05D007131 ORTHO05D009026 6.7e-40 169.1 145 57.9
A09p04560 Brassica napus HOM05D007131 ORTHO05D009026 2.6e-39 167.2 149 57.0
BraA09t36091Z Brassica rapa HOM05D007131 ORTHO05D009026 2.6e-39 167.2 149 57.0
PGSC0003DMG400020651 Solanum tuberosum HOM05D007131 ORTHO05D009026 2.6e-39 167.2 137 59.9
Dinv28824 Davidia involucrata HOM05D007131 ORTHO05D009026 4.4e-39 166.4 143 55.2
CsaV3_7G027510 Cucumis sativus L. HOM05D007131 ORTHO05D009026 5.7e-39 166.0 197 45.7
Psat3g150760 Pisum sativum HOM05D007131 ORTHO05D009026 7.4e-39 165.6 130 59.2
BolC9t53415H Brassica oleracea HOM05D007131 ORTHO05D009026 9.7e-39 165.2 149 56.4
HanXRQChr08g0231751 Helianthus annuus HOM05D007131 ORTHO05D009026 1.3e-38 164.9 141 57.4
Nitab4.5_0001471g0060 Nicotiana tabacum HOM05D007131 ORTHO05D009026 1.7e-38 164.5 141 58.2
Solyc06g007590.3 Solanum lycopersicum HOM05D007131 ORTHO05D009026 1.7e-38 164.5 137 59.1
Lsat_1_v5_gn_9_17941 Lactuca sativa HOM05D007131 ORTHO05D009026 2.2e-38 164.1 172 50.6
Peaxi162Scf01069g00214 Petunia axillaris HOM05D007131 ORTHO05D009026 3.7e-38 163.3 137 57.7
ECA247G2839 Erigeron canadensis HOM05D004243 ORTHO05D005018 4.8e-38 162.9 141 56.7
Oeu064654.1 Olea europaea HOM05D007131 ORTHO05D009026 8.2e-38 162.2 119 60.5
unitig_37.g12881 Utricularia gibba HOM05D007131 ORTHO05D009026 9.1e-37 158.7 141 52.5
Cc01_g16360 Coffea canephora HOM05D007131 ORTHO05D009026 1.2e-36 158.3 122 61.5
TWI36G0143 Tripterygium wilfordii HOM05D007131 ORTHO05D009026 1.5e-36 157.9 155 52.9
Nn1g09828 Nelumbo nucifera HOM05D007131 ORTHO05D009026 4.5e-36 156.4 122 59.8
CDE08G0780 Ceratophyllum demersum HOM05D007131 ORTHO05D009026 6.5e-35 152.5 144 55.6
Atru.chr6.1589 Acer truncatum HOM05D007131 ORTHO05D009026 3.2e-34 150.2 144 52.8
Aa31sc517G10 Aethionema arabicum HOM05D007131 ORTHO05D009026 1.4e-32 144.8 195 42.1
AT5G48545 Arabidopsis thaliana HOM05D007131 ORTHO05D009026 2.3e-32 144.1 94 70.2
Manes.12G051500 Manihot esculenta HOM05D007131 ORTHO05D009026 2.6e-31 140.6 94 70.2
Gohir.D11G147600 Gossypium hirsutum HOM05D007131 ORTHO05D009026 7.4e-31 139.0 94 67.0
FAN27G0491 Fragaria x ananassa HOM05D007131 ORTHO05D009026 1.2e-28 131.7 167 47.3
FAN24G0325 Fragaria x ananassa HOM05D007131 ORTHO05D009026 1.6e-28 131.3 163 47.9
VMungo1383G1151 Vigna mungo HOM05D007131 ORTHO05D009026 2.9e-27 127.1 120 56.7
SalBow3G2460 Salvia bowleyana HOM05D007131 ORTHO05D009026 2.7e-25 120.6 151 43.7
Sopen06g002490 Solanum pennellii HOM05D007131 ORTHO05D009026 2.3e-24 117.5 103 59.2
Phvul.008G134700 Phaseolus vulgaris HOM05D007131 ORTHO05D009026 3.0e-24 117.1 94 61.7
Thhalv10005043m.g Eutrema salsugineum HOM05D007131 ORTHO05D009026 8.2e-22 109.0 73 65.8
AUR62022148 Chenopodium quinoa HOM05D007131 ORTHO05D009026 9.1e-21 105.5 163 36.8
SEGI_25619 Sequoiadendron giganteum HOM05D007131 ORTHO05D009026 8.5e-19 99.0 86 55.8
GSVIVG01002500001 Vitis vinifera HOM05D007131 ORTHO05D009026 1.6e-17 94.7 84 57.1
arahy.Tifrunner.gnm1.ann1.YI3R6M Arachis hypogaea HOM05D007131 ORTHO05D009026 2.1e-17 94.4 59 72.9
CARHR183470 Cardamine hirsuta HOM05D007131 ORTHO05D009026 6.1e-17 92.8 54 70.4
Lj2A1119T34 Lonicera japonica HOM05D007131 ORTHO05D009026 1.4e-16 91.7 103 49.5
MCO06G116 Micromonas commoda HOM05D007131 ORTHO05D009026 5.2e-16 89.7 140 37.1
CiPaw.14G045900 Carya illinoinensis HOM05D007131 ORTHO05D009026 6.6e-11 72.8 75 52.0
QL09p048378 Quercus lobata HOM05D007131 ORTHO05D009026 1.5e-10 71.6 62 56.5
Os11g0295000 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 4.2e-10 70.1 70 52.9
Cre15.g639400 Chlamydomonas reinhardtii HOM05D005501 ORTHO05D007485 2.0e-07 61.2 87 40.2
Cpa.g.sc8.95 Carica papaya HOM05D007131 ORTHO05D009026 4.4e-07 60.1 34 67.6
AUR62001177 Chenopodium quinoa HOM05D007131 ORTHO05D009026 4.4e-07 60.1 96 37.5


User provided reference genes

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