Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 3.6e-85 318.2 157 100.0
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 3.8e-50 201.8 151 59.6
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 4.7e-24 115.2 151 39.1
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.3e-18 97.1 142 35.9
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.3e-18 97.1 142 35.9
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.9e-18 95.9 142 35.9
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 1.1e-17 94.0 142 31.0
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 1.5e-17 93.6 142 30.3
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 3.3e-17 92.4 144 31.9
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 5.5e-17 91.7 153 29.4
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 9.5e-17 90.9 144 29.9
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 1.2e-16 90.5 145 32.4
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.2e-16 90.5 144 29.9
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 1.2e-16 90.5 144 29.9
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 1.6e-16 90.1 144 29.2
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.8e-16 89.4 144 30.6
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 2.8e-16 89.4 144 29.2
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 2.8e-16 89.4 143 31.5
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 4.7e-16 88.6 144 29.2
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 6.1e-16 88.2 144 28.5
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 1.0e-15 87.4 144 28.5
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 1.0e-15 87.4 144 29.9
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 1.0e-15 87.4 144 27.8
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 1.0e-15 87.4 144 28.5
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.4e-15 87.0 144 29.2
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 1.8e-15 86.7 143 30.8
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 1.8e-15 86.7 143 29.4
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.3e-15 86.3 144 29.2
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 3.0e-15 85.9 142 29.6
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 6.8e-15 84.7 144 28.5
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 6.8e-15 84.7 144 29.9
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 6.8e-15 84.7 144 28.5
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 8.9e-15 84.3 145 29.0
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 1.5e-14 83.6 144 29.2
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 1.5e-14 83.6 146 32.2
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 1.5e-14 83.6 144 28.5
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 2.6e-14 82.8 144 27.8
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 2.6e-14 82.8 144 27.1
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 4.4e-14 82.0 144 29.9
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 4.4e-14 82.0 144 28.5
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 4.4e-14 82.0 144 27.8
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 5.7e-14 81.6 144 28.5
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 5.7e-14 81.6 145 28.3
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 5.7e-14 81.6 144 27.8
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 5.7e-14 81.6 145 27.6
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 5.7e-14 81.6 144 29.9
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 7.5e-14 81.3 144 29.9
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 9.8e-14 80.9 144 29.9
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 9.8e-14 80.9 145 30.3
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 9.8e-14 80.9 145 29.0
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 1.3e-13 80.5 144 29.2
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 1.3e-13 80.5 144 28.5
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 1.3e-13 80.5 144 27.1
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 1.3e-13 80.5 144 27.8
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 1.3e-13 80.5 144 28.5
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 1.7e-13 80.1 144 29.2
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 1.7e-13 80.1 144 28.5
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 2.2e-13 79.7 144 29.2
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 2.2e-13 79.7 144 29.2
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 2.2e-13 79.7 145 29.0
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 2.2e-13 79.7 144 27.1
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 2.2e-13 79.7 145 29.0
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 2.8e-13 79.3 145 26.9
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.8e-13 79.3 145 30.3
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 2.8e-13 79.3 144 27.8
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 3.7e-13 79.0 144 27.1
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 3.7e-13 79.0 145 27.6
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 3.7e-13 79.0 144 28.5
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 3.7e-13 79.0 144 28.5
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 3.7e-13 79.0 144 28.5
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 4.9e-13 78.6 144 28.5
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 6.3e-13 78.2 144 28.5
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 8.3e-13 77.8 146 28.1
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 1.1e-12 77.4 145 26.9
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 1.8e-12 76.6 144 27.1
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 1.8e-12 76.6 150 25.3
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 4.1e-12 75.5 144 31.2
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 4.1e-12 75.5 146 28.1
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 4.1e-12 75.5 144 27.1
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 7.0e-12 74.7 136 27.9
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 2.0e-11 73.2 155 27.7
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 4.5e-11 72.0 145 27.6
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 5.9e-11 71.6 83 38.6
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 5.9e-11 71.6 81 39.5
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.3e-10 69.7 81 40.7
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 2.9e-10 69.3 84 38.1
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 8.6e-10 67.8 101 34.7
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 3.3e-09 65.9 111 33.3
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 7.3e-09 64.7 102 29.4
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 2.8e-08 62.8 160 25.6
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 8.0e-08 61.2 77 33.8
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 3.4e-06 55.8 56 46.4


User provided reference genes

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