Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_33070 Physcomitrium patens HOM05D054063 ORTHO05D020868 1.9e-287 991.9 525 100.0
Pp3c1_33080 Physcomitrium patens HOM05D054063 ORTHO05D020868 8.0e-286 986.5 525 99.6
Pp3c14_17330 Physcomitrium patens HOM05D020729 ORTHO05D020868 4.9e-17 93.6 195 42.6
Mapoly0737s0001 Marchantia polymorpha HOM05D020729 ORTHO05D020868 1.3e-14 85.5 163 42.9
Pp3c1_38440 Physcomitrium patens HOM05D020729 ORTHO05D020868 1.1e-13 82.4 154 42.9
Pp3c2_4600 Physcomitrium patens HOM05D020729 ORTHO05D020868 1.9e-13 81.6 133 46.6
Pp3c17_21430 Physcomitrium patens HOM05D020729 ORTHO05D020868 9.5e-13 79.3 150 42.7
TAR362G0578 Trochodendron aralioides HOM05D001346 ORTHO05D001205 2.7e-07 61.2 110 43.6
Eucgr.H04338 Eucalyptus grandis HOM05D001346 ORTHO05D001205 3.5e-07 60.8 109 43.1
HanXRQChr03g0073411 Helianthus annuus HOM05D000697 ORTHO05D000169 6.0e-07 60.1 90 42.2
Mapoly0034s0126 Marchantia polymorpha HOM05D000697 ORTHO05D000169 6.0e-07 60.1 87 43.7
C07p40130 Brassica napus HOM05D001346 ORTHO05D001205 7.8e-07 59.7 101 42.6
Mapoly0012s0172 Marchantia polymorpha HOM05D001346 ORTHO05D001205 7.8e-07 59.7 106 44.3
Solyc01g097330.3 Solanum lycopersicum HOM05D001346 ORTHO05D001205 7.8e-07 59.7 110 43.6
Sopen01g041000 Solanum pennellii HOM05D001346 ORTHO05D001205 7.8e-07 59.7 110 43.6
CBR_g23827 Chara braunii HOM05D020729 ORTHO05D001205 1.3e-06 58.9 198 32.3
CBR_g29348 Chara braunii HOM05D001346 ORTHO05D001205 1.3e-06 58.9 79 51.9
BcaNung02111 Brassica carinata HOM05D001346 ORTHO05D001205 1.7e-06 58.5 101 42.6
BolC7t44550H Brassica oleracea HOM05D001346 ORTHO05D001205 1.7e-06 58.5 101 42.6
Hund22114 Selenicereus undatus HOM05D001346 ORTHO05D001205 1.7e-06 58.5 110 42.7
MBI11_g15910_MAGBIO Magnolia biondii HOM05D001346 ORTHO05D001205 2.3e-06 58.2 104 42.3
MD15G1022500 Malus domestica HOM05D000697 ORTHO05D000169 2.3e-06 58.2 80 43.8
TWI56G0207 Tripterygium wilfordii HOM05D001346 ORTHO05D001205 2.3e-06 58.2 113 40.7
GSVIVG01000714001 Vitis vinifera HOM05D001346 ORTHO05D001205 2.3e-06 58.2 105 43.8
Hma1.2p1_0817F.1_g223100 Hydrangea macrophylla HOM05D001346 ORTHO05D001205 3.0e-06 57.8 118 42.4
Nn1g02540 Nelumbo nucifera HOM05D001346 ORTHO05D001205 3.0e-06 57.8 105 44.8
A02p38280 Brassica napus HOM05D001346 ORTHO05D001205 3.9e-06 57.4 186 30.6
ClCG02G016610 Citrullus lanatus HOM05D001346 ORTHO05D001205 3.9e-06 57.4 104 45.2
DCAR_017518 Daucus carota HOM05D000697 ORTHO05D000169 3.9e-06 57.4 78 44.9
Potri.005G053200 Populus trichocarpa HOM05D001346 ORTHO05D001205 3.9e-06 57.4 113 41.6
BcaC06g30687 Brassica carinata HOM05D001346 ORTHO05D001205 5.1e-06 57.0 102 42.2
Dinv04732 Davidia involucrata HOM05D001346 ORTHO05D001205 5.1e-06 57.0 110 42.7
PSO210G0790 Papaver somniferum HOM05D001346 ORTHO05D001205 5.1e-06 57.0 110 42.7
PSO832G4214 Papaver somniferum HOM05D001346 ORTHO05D001205 5.1e-06 57.0 110 42.7
Prupe.6G343100 Prunus persica HOM05D001346 ORTHO05D001205 5.1e-06 57.0 106 42.5
PGR004G2685 Punica granatum HOM05D001346 ORTHO05D001205 5.1e-06 57.0 106 40.6
RcHm_v2.0_Chr6g0265831 Rosa chinensis HOM05D000697 ORTHO05D000169 5.1e-06 57.0 86 45.3
PGSC0003DMG400019455 Solanum tuberosum HOM05D001346 ORTHO05D001205 5.1e-06 57.0 109 43.1
MSTRG.1251 Avicennia marina HOM05D000697 ORTHO05D000169 6.6e-06 56.6 78 44.9
A06p38080 Brassica napus HOM05D001346 ORTHO05D001205 6.6e-06 56.6 101 41.6
BraA02t08809Z Brassica rapa HOM05D001346 ORTHO05D001205 6.6e-06 56.6 186 30.6
BraA06t26723Z Brassica rapa HOM05D001346 ORTHO05D001205 6.6e-06 56.6 101 41.6
CiPaw.08G123700 Carya illinoinensis HOM05D001346 ORTHO05D001205 6.6e-06 56.6 111 41.4
HanXRQChr12g0376231 Helianthus annuus HOM05D000697 ORTHO05D000169 6.6e-06 56.6 78 42.3
Peaxi162Scf00282g00338 Petunia axillaris HOM05D001346 ORTHO05D001205 6.6e-06 56.6 109 43.1
SMO364G0162 Selaginella moellendorffii HOM05D001346 ORTHO05D001205 6.6e-06 56.6 118 42.4
MSTRG.20444 Avicennia marina HOM05D001346 ORTHO05D001205 8.6e-06 56.2 110 41.8
CSS0049111 Camellia sinensis var. sinensis HOM05D001346 ORTHO05D001205 8.6e-06 56.2 114 42.1
CAN.G134.98 Capsicum annuum HOM05D001346 ORTHO05D001205 8.6e-06 56.2 105 43.8
Duzib132G0329 Durio zibethinus HOM05D000697 ORTHO05D000169 8.6e-06 56.2 100 41.0
Hma1.2p1_0066F.1_g036170 Hydrangea macrophylla HOM05D000697 ORTHO05D000169 8.6e-06 56.2 86 43.0
Prupe.1G455300 Prunus persica HOM05D001346 ORTHO05D001205 8.6e-06 56.2 129 38.8
SGA_v2.0_scaffold12G06331 Striga asiatica HOM05D000697 ORTHO05D000169 8.6e-06 56.2 96 38.5
vmacro02081 Vaccinium macrocarpon HOM05D000697 ORTHO05D000169 8.6e-06 56.2 78 44.9
HPP92_026289 Vanilla planifolia HOM05D001346 ORTHO05D001205 8.6e-06 56.2 133 40.6


User provided reference genes

Program Settings