Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 6.9e-176 620.5 315 100.0
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 1.3e-105 387.1 323 66.6
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 9.9e-66 254.6 335 44.8
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 8.4e-65 251.5 330 44.8
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 6.4e-57 225.3 329 40.1
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 1.1e-56 224.6 330 40.9
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 1.6e-55 220.7 322 39.4
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 6.0e-55 218.8 332 41.0
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 1.0e-54 218.0 322 41.9
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 6.7e-54 215.3 325 39.1
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 1.1e-53 214.5 332 39.2
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 1.5e-53 214.2 323 41.8
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 1.9e-53 213.8 323 39.3
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 1.6e-52 210.7 329 38.6
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 1.6e-52 210.7 322 41.3
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 2.1e-52 210.3 321 41.1
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 8.2e-52 208.4 327 41.6
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 3.1e-51 206.5 325 39.7
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 4.0e-51 206.1 330 40.3
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 9.0e-51 204.9 327 41.6
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 2.6e-50 203.4 328 38.7
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 3.4e-50 203.0 346 40.5
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 4.5e-50 202.6 324 38.0
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 4.5e-50 202.6 321 39.3
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 4.5e-50 202.6 321 39.9
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 5.8e-50 202.2 329 37.7
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 5.8e-50 202.2 330 39.7
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 5.8e-50 202.2 330 40.3
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 7.6e-50 201.8 330 37.9
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 1.0e-49 201.4 328 40.9
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 1.3e-49 201.1 321 37.7
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 1.7e-49 200.7 324 42.0
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 1.7e-49 200.7 324 38.9
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 1.7e-49 200.7 321 37.7
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 1.7e-49 200.7 327 42.5
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 2.2e-49 200.3 319 37.6
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 2.9e-49 199.9 326 39.9
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 2.9e-49 199.9 321 37.7
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 3.8e-49 199.5 348 39.9
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 4.9e-49 199.1 311 41.2
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 8.4e-49 198.4 320 36.9
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 1.1e-48 198.0 323 39.6
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 1.1e-48 198.0 329 38.3
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 1.4e-48 197.6 334 39.5
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 1.9e-48 197.2 322 38.5
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 2.5e-48 196.8 318 39.3
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 2.5e-48 196.8 320 40.0
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 2.5e-48 196.8 322 38.8
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 3.2e-48 196.4 331 39.9
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 4.2e-48 196.1 320 40.0
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 4.2e-48 196.1 327 38.8
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 5.5e-48 195.7 330 37.9
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 7.1e-48 195.3 320 39.7
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 1.6e-47 194.1 325 36.9
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 1.6e-47 194.1 320 38.1
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 2.1e-47 193.7 325 39.4
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 3.5e-47 193.0 321 40.2
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 4.6e-47 192.6 318 38.7
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 4.6e-47 192.6 331 37.8
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 7.9e-47 191.8 335 38.2
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 1.0e-46 191.4 334 38.3
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 1.0e-46 191.4 318 38.1
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 1.8e-46 190.7 324 39.2
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 2.3e-46 190.3 324 39.5
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 2.3e-46 190.3 329 37.4
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 3.0e-46 189.9 323 39.6
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 3.0e-46 189.9 329 37.7
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 3.9e-46 189.5 324 40.1
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 3.9e-46 189.5 323 39.0
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 3.9e-46 189.5 326 38.7
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 5.1e-46 189.1 322 38.2
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 6.7e-46 188.7 324 38.3
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 1.5e-45 187.6 321 38.0
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 7.4e-45 185.3 344 35.2
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 7.4e-45 185.3 327 39.1
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 1.6e-44 184.1 326 39.9
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 1.6e-44 184.1 331 37.8
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 2.2e-44 183.7 328 36.6
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 2.8e-44 183.3 327 36.1
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 8.2e-44 181.8 331 35.3
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 1.1e-43 181.4 335 37.9
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.1e-43 181.4 324 36.4
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 1.4e-43 181.0 327 36.1
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 1.4e-43 181.0 376 33.8
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 6.9e-43 178.7 326 35.6
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 5.9e-42 175.6 326 36.5
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 7.6e-42 175.3 323 36.2
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 2.9e-41 173.3 331 34.4
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 8.5e-41 171.8 328 35.4
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 1.1e-40 171.4 326 35.6
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 1.4e-40 171.0 326 35.6
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 9.4e-40 168.3 405 31.9
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 2.7e-39 166.8 302 36.4
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 1.4e-38 164.5 320 37.5
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 1.4e-38 164.5 318 35.2
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 4.3e-37 159.5 323 35.0
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 5.7e-37 159.1 321 36.1
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 3.7e-36 156.4 280 36.1
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.1e-35 154.8 302 35.8
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 4.1e-35 152.9 335 35.2
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 5.3e-35 152.5 258 37.2
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 7.7e-34 148.7 272 36.0
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 5.0e-33 146.0 295 35.3
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 2.5e-32 143.7 333 32.7
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 5.5e-32 142.5 321 34.3
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 4.7e-31 139.4 229 38.0
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 6.1e-31 139.0 234 38.0
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 1.4e-30 137.9 295 33.9
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 1.1e-29 134.8 319 31.0
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 2.0e-29 134.0 243 36.6
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 2.6e-29 133.7 230 40.0
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 2.6e-29 133.7 313 32.6
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 1.4e-27 127.9 267 34.8
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 5.3e-27 125.9 293 32.4
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 5.3e-27 125.9 159 42.1
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 2.6e-26 123.6 274 33.9
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 3.4e-26 123.2 220 40.0
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 2.9e-25 120.2 331 29.3
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.2e-18 98.2 253 30.8
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 2.9e-17 93.6 246 28.0
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 3.0e-14 83.6 193 30.1
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 2.9e-09 67.0 55 60.0
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 1.5e-08 64.7 220 27.3
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.4e-06 58.2 45 57.8
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.4e-06 58.2 45 57.8


User provided reference genes

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