Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 6.2e-252 873.6 434 100.0
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 3.3e-176 622.1 435 70.8
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 2.1e-175 619.4 431 71.5
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.7e-148 530.0 432 60.0
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 3.8e-132 475.7 442 54.3
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 3.2e-131 472.6 446 52.9
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 1.6e-130 470.3 438 54.3
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 2.1e-130 469.9 445 51.7
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 3.9e-129 465.7 446 52.2
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 6.7e-129 464.9 447 53.2
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 1.5e-128 463.8 436 53.7
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 5.6e-128 461.8 437 52.2
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 9.6e-128 461.1 430 52.8
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 1.6e-127 460.3 449 53.2
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 4.8e-127 458.8 435 51.7
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 4.8e-127 458.8 452 52.9
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 1.4e-126 457.2 424 52.8
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.8e-126 456.8 447 51.9
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 5.3e-126 455.3 440 51.8
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 1.5e-125 453.8 433 52.0
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 1.5e-125 453.8 434 52.3
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 2.0e-125 453.4 431 52.0
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 2.0e-125 453.4 436 52.8
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 2.6e-125 453.0 435 52.4
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 2.6e-125 453.0 433 52.9
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 3.4e-125 452.6 437 51.5
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 3.4e-125 452.6 432 51.9
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 3.4e-125 452.6 440 53.2
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 3.4e-125 452.6 432 52.5
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.0e-124 451.1 447 51.7
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 1.3e-124 450.7 438 52.7
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 1.7e-124 450.3 433 52.2
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 1.7e-124 450.3 442 51.6
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 2.2e-124 449.9 441 51.5
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 4.9e-124 448.7 436 50.5
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 6.4e-124 448.4 424 52.6
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 8.4e-124 448.0 445 51.0
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 1.4e-123 447.2 460 49.8
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 1.4e-123 447.2 444 50.9
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 3.2e-123 446.0 447 50.8
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 4.2e-123 445.7 429 52.4
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 4.2e-123 445.7 437 52.9
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 4.2e-123 445.7 450 50.4
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 7.1e-123 444.9 448 50.0
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 9.3e-123 444.5 431 52.0
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 1.2e-122 444.1 444 50.9
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 1.2e-122 444.1 443 50.8
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 1.6e-122 443.7 435 50.8
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 2.1e-122 443.4 434 50.9
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 3.5e-122 442.6 443 51.0
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 3.5e-122 442.6 442 52.0
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 4.6e-122 442.2 431 52.2
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 7.9e-122 441.4 428 50.7
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 1.3e-121 440.7 433 50.8
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 1.8e-121 440.3 430 53.3
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 2.3e-121 439.9 435 51.3
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 2.3e-121 439.9 435 51.3
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 2.3e-121 439.9 441 52.6
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 2.3e-121 439.9 437 51.3
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 3.9e-121 439.1 451 52.1
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.5e-120 437.2 433 50.8
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 1.9e-120 436.8 445 50.8
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 2.5e-120 436.4 435 51.0
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 2.5e-120 436.4 435 51.0
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 4.3e-120 435.6 451 49.7
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 5.7e-120 435.3 439 50.1
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 5.7e-120 435.3 451 49.7
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 5.7e-120 435.3 437 51.3
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 9.6e-120 434.5 445 50.6
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 2.8e-119 433.0 442 49.3
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 6.2e-119 431.8 419 52.7
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 6.2e-119 431.8 434 50.2
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 8.2e-119 431.4 449 49.4
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 1.1e-118 431.0 448 51.6
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 2.4e-118 429.9 446 49.6
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 5.3e-118 428.7 447 49.2
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 1.5e-117 427.2 434 49.5
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.0e-117 426.8 452 51.1
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 2.0e-117 426.8 448 48.7
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 3.4e-117 426.0 439 49.4
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.3e-116 424.1 438 49.8
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 5.0e-116 422.2 429 50.3
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 1.1e-115 421.0 434 49.8
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 5.5e-115 418.7 441 49.2
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 9.3e-115 417.9 445 49.9
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.2e-114 417.5 440 49.1
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.6e-114 417.2 434 51.2
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 1.3e-113 414.1 439 47.8
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 1.9e-112 410.2 440 49.1
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 3.3e-112 409.5 448 47.5
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 2.8e-111 406.4 379 53.6
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 5.3e-110 402.1 448 49.1
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 2.0e-109 400.2 433 48.5
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 3.4e-109 399.4 435 47.6
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 1.7e-108 397.1 426 48.8
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 6.1e-106 388.7 312 60.6
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 7.9e-106 388.3 432 48.4
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 1.8e-105 387.1 493 44.6
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 3.7e-103 379.4 360 50.8
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.1e-102 377.9 451 45.2
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 1.5e-101 374.0 350 53.1
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 5.0e-100 369.0 466 45.9
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 7.2e-99 365.2 447 45.2
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 4.7e-98 362.5 430 45.3
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.1e-96 357.8 341 53.4
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 4.4e-96 355.9 442 46.6
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 3.1e-94 349.7 334 50.3
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 7.2e-91 338.6 363 49.6
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 1.0e-89 334.7 455 43.3
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 1.3e-84 317.8 331 48.9
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 1.1e-83 314.7 351 46.2
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 5.7e-80 302.4 307 49.8
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 1.3e-76 291.2 288 51.7
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 7.3e-59 232.3 211 55.9
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 1.8e-57 227.6 254 49.2
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 1.6e-53 214.5 402 35.8
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.4e-46 190.7 238 42.9
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 7.1e-46 189.1 217 45.2
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.4e-32 143.3 147 46.9
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-21 107.5 198 35.9
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 9.0e-17 92.4 114 36.8
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 2.0e-16 91.3 120 36.7
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 1.4e-14 85.1 100 38.0
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 8.1e-10 69.3 103 35.9
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.7e-07 61.6 38 71.1
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.7e-07 61.6 93 43.0
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 2.2e-07 61.2 55 47.3


User provided reference genes

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