Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 6.0e-244 847.0 417 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 3.2e-120 436.0 315 67.6
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 6.0e-111 405.2 291 66.7
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 4.0e-107 392.5 267 71.2
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 1.1e-101 374.4 310 59.0
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 1.5e-101 374.0 286 63.6
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 1.5e-101 374.0 288 61.8
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 3.3e-101 372.9 291 61.5
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 7.4e-101 371.7 291 61.9
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 7.4e-101 371.7 312 58.0
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.6e-100 370.5 288 62.5
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 2.1e-100 370.2 289 62.3
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.1e-100 370.2 289 63.3
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 6.2e-100 368.6 288 61.8
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 8.2e-100 368.2 306 58.8
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.1e-99 367.9 287 62.4
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 1.1e-99 367.9 288 61.8
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.8e-99 367.1 287 62.4
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 1.8e-99 367.1 288 61.5
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 2.4e-99 366.7 327 56.6
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 3.1e-99 366.3 287 62.7
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 5.3e-99 365.5 337 56.7
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 9.0e-99 364.8 287 62.4
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 9.0e-99 364.8 301 60.8
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 1.2e-98 364.4 294 59.5
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 1.5e-98 364.0 291 60.5
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 1.5e-98 364.0 286 62.6
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 2.0e-98 363.6 288 61.5
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 4.5e-98 362.5 310 57.7
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 7.6e-98 361.7 281 63.7
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 7.6e-98 361.7 287 62.4
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 1.3e-97 360.9 288 60.8
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 1.3e-97 360.9 336 55.4
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 1.7e-97 360.5 313 56.2
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 2.9e-97 359.8 346 52.3
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 2.9e-97 359.8 312 58.0
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 4.9e-97 359.0 289 60.6
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 4.9e-97 359.0 288 60.1
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 8.4e-97 358.2 330 54.5
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 8.4e-97 358.2 266 65.0
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 1.1e-96 357.8 288 61.1
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 1.1e-96 357.8 288 59.7
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.1e-96 357.8 289 61.2
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 1.4e-96 357.5 319 55.8
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 1.9e-96 357.1 287 61.7
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 2.5e-96 356.7 289 60.9
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 2.5e-96 356.7 288 58.0
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 3.2e-96 356.3 285 61.1
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 4.2e-96 355.9 288 59.4
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 4.2e-96 355.9 286 60.5
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 4.2e-96 355.9 335 54.9
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 9.3e-96 354.8 310 56.5
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 1.2e-95 354.4 297 58.2
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 1.6e-95 354.0 288 59.0
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 2.7e-95 353.2 310 57.4
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 3.5e-95 352.8 286 60.5
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 6.0e-95 352.1 283 60.8
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 7.9e-95 351.7 286 60.8
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 1.0e-94 351.3 347 53.3
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 2.3e-94 350.1 289 59.2
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 2.3e-94 350.1 273 63.4
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.3e-94 350.1 287 60.3
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 3.0e-94 349.7 304 55.9
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 3.0e-94 349.7 322 55.3
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 6.7e-94 348.6 341 53.7
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 6.7e-94 348.6 286 60.8
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 6.7e-94 348.6 288 58.7
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 8.7e-94 348.2 288 58.3
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.5e-93 347.4 288 58.0
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 2.5e-93 346.7 307 57.0
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 3.3e-93 346.3 294 59.9
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 4.3e-93 345.9 307 55.7
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.6e-92 344.0 348 53.2
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 6.3e-92 342.0 295 56.6
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 8.2e-92 341.7 274 61.7
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 8.2e-92 341.7 313 56.2
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 4.1e-91 339.3 326 54.9
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 4.1e-91 339.3 287 59.2
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 9.0e-91 338.2 274 60.6
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 1.5e-90 337.4 290 57.9
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.5e-90 337.4 303 55.8
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 4.5e-90 335.9 343 54.8
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 1.0e-89 334.7 325 54.8
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.3e-89 334.3 276 61.6
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 8.5e-89 331.6 352 50.6
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 7.9e-87 325.1 291 55.7
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 4.6e-79 299.3 394 43.4
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 6.1e-79 298.9 322 49.4
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 2.3e-78 297.0 221 63.3
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.5e-77 294.3 282 51.4
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.8e-76 289.3 275 52.7
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 5.9e-74 282.3 308 51.3
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.6e-71 273.1 300 48.3
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 8.8e-70 268.5 231 56.3
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 3.3e-69 266.5 201 64.7
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 2.0e-61 240.7 253 50.6
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 6.3e-60 235.7 206 59.7
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 3.4e-53 213.4 156 67.3
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 1.3e-44 184.9 145 62.1
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 2.8e-44 183.7 252 41.3
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 8.3e-44 182.2 141 61.7
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 7.3e-40 169.1 150 56.7
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 5.2e-38 162.9 136 59.6
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.2e-36 157.5 252 37.7
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 2.0e-29 134.4 105 60.0
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 2.6e-29 134.0 110 57.3
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.2e-26 125.2 182 39.6
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.6e-26 124.8 182 39.6
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 4.3e-24 116.7 89 62.9
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 3.6e-23 113.6 82 65.9
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 4.0e-22 110.2 89 59.6
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.2e-18 98.6 71 64.8
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.5e-13 81.6 57 68.4
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 7.1e-11 72.8 128 35.9
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 2.3e-09 67.8 60 55.0
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-08 65.5 56 57.1
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 5.6e-08 63.2 71 43.7
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.2e-07 62.0 61 59.0
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 5.2e-06 56.6 81 39.5


User provided reference genes

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