Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_22230 Physcomitrium patens HOM05D005252 ORTHO05D006788 1.3e-260 902.5 441 100.0
PSO782G3987 Papaver somniferum HOM05D005252 ORTHO05D006788 7.8e-85 318.5 439 41.5
TPR.G5289 Trifolium pratense HOM05D005252 ORTHO05D006788 3.9e-84 316.2 437 42.1
SEGI_32636 Sequoiadendron giganteum HOM05D005252 ORTHO05D006788 8.7e-84 315.1 473 39.7
PSO063G5026 Papaver somniferum HOM05D005252 ORTHO05D006788 2.5e-83 313.5 439 41.5
QL02p064187 Quercus lobata HOM05D005252 ORTHO05D006788 2.5e-83 313.5 428 43.9
arahy.Tifrunner.gnm1.ann1.Y82BEI Arachis hypogaea HOM05D005252 ORTHO05D006788 5.6e-83 312.4 442 41.0
arahy.Tifrunner.gnm1.ann1.UX6KKC Arachis hypogaea HOM05D005252 ORTHO05D006788 1.6e-82 310.8 448 38.8
Phvul.008G241400 Phaseolus vulgaris HOM05D005252 ORTHO05D006788 2.1e-82 310.5 445 40.4
LjContig00141g0010829 Lotus japonicus HOM05D005252 ORTHO05D006788 4.8e-82 309.3 448 39.7
MBI06_g19632_MAGBIO Magnolia biondii HOM05D005252 ORTHO05D006788 6.2e-82 308.9 454 40.5
Glyma.14G209800 Glycine max HOM05D005252 ORTHO05D006788 1.4e-81 307.8 445 39.3
VMungo0647G0073 Vigna mungo HOM05D005252 ORTHO05D006788 1.4e-81 307.8 452 40.3
FvH4_1g27420 Fragaria vesca HOM05D005252 ORTHO05D006788 9.0e-81 305.1 441 42.0
Medtr5g076640 Medicago truncatula HOM05D005252 ORTHO05D006788 9.0e-81 305.1 433 40.9
AUR62037491 Chenopodium quinoa HOM05D005252 ORTHO05D006788 2.6e-80 303.5 430 42.6
Ca_05755_v3 Cicer arietinum L. HOM05D005252 ORTHO05D006788 3.4e-80 303.1 453 39.5
MD17G1287300 Malus domestica HOM05D005252 ORTHO05D006788 4.4e-80 302.8 433 43.4
Haze_14323 Corylus avellana HOM05D005252 ORTHO05D006788 5.8e-80 302.4 452 41.4
Psat2g042800 Pisum sativum HOM05D005252 ORTHO05D006788 9.9e-80 301.6 430 40.0
RcHm_v2.0_Chr3g0488621 Rosa chinensis HOM05D005252 ORTHO05D006788 3.8e-79 299.7 446 40.1
Cfa007750 Carpinus fangiana HOM05D005252 ORTHO05D006788 4.9e-79 299.3 453 39.7
Lalb_Chr04g0251511 Lupinus albus HOM05D005252 ORTHO05D006788 6.4e-79 298.9 434 41.0
SMO244G0074 Selaginella moellendorffii HOM05D005252 ORTHO05D006788 1.4e-78 297.7 428 40.9
Actinidia28776 Actinidia chinensis HOM05D005252 ORTHO05D006788 2.4e-78 297.0 445 40.2
Ah.06g191550 Amaranthus hybridus HOM05D005252 ORTHO05D006788 3.2e-78 296.6 430 41.2
COL.COLO4_20051 Corchorus olitorius HOM05D005252 ORTHO05D006788 4.2e-78 296.2 438 42.0
SalBow5G4252 Salvia bowleyana HOM05D005252 ORTHO05D006788 4.2e-78 296.2 431 41.1
TAR622G0726 Trochodendron aralioides HOM05D005252 ORTHO05D006788 4.2e-78 296.2 439 38.3
FAN28G2815 Fragaria x ananassa HOM05D005252 ORTHO05D006788 5.4e-78 295.8 444 40.1
SalBow5G4267 Salvia bowleyana HOM05D005252 ORTHO05D006788 5.4e-78 295.8 440 40.5
CSS0009455 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 1.2e-77 294.7 445 40.7
Ciclev10011537m.g Citrus clementina HOM05D005252 ORTHO05D006788 1.2e-77 294.7 444 41.2
Prupe.3G014000 Prunus persica HOM05D005252 ORTHO05D006788 1.2e-77 294.7 424 42.9
Cpa.g.sc178.38 Carica papaya HOM05D005252 ORTHO05D006788 2.1e-77 293.9 456 39.5
EL10Ac4g08917 Beta vulgaris HOM05D005252 ORTHO05D006788 2.7e-77 293.5 441 39.7
CSS0014125 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 3.5e-77 293.1 445 40.7
Nn5g27060 Nelumbo nucifera HOM05D005252 ORTHO05D006788 7.9e-77 292.0 442 40.5
Potri.004G081400 Populus trichocarpa HOM05D005252 ORTHO05D006788 1.7e-76 290.8 430 40.0
SGA_v2.0_scaffold115G32046 Striga asiatica HOM05D005252 ORTHO05D006788 1.7e-76 290.8 450 38.4
Hma1.2p1_0158F.1_g069575 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 3.9e-76 289.7 453 40.8
Hma1.2p1_0158F.1_g069580 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 3.9e-76 289.7 453 40.8
AUR62004761 Chenopodium quinoa HOM05D005252 ORTHO05D006788 5.1e-76 289.3 420 42.9
Nitab4.5_0000483g0240 Nicotiana tabacum HOM05D005252 ORTHO05D006788 8.7e-76 288.5 432 38.4
Lj2C511T2 Lonicera japonica HOM05D005252 ORTHO05D006788 1.1e-75 288.1 441 40.8
Aqoxy3G04163 Aquilegia oxysepala HOM05D005252 ORTHO05D006788 1.9e-75 287.3 446 37.9
Duzib133G0566 Durio zibethinus HOM05D005252 ORTHO05D006788 1.9e-75 287.3 431 41.1
TWI74G0077 Tripterygium wilfordii HOM05D005252 ORTHO05D006788 2.5e-75 287.0 436 40.8
DCAR_003403 Daucus carota HOM05D005252 ORTHO05D006788 3.3e-75 286.6 445 40.0
Cc07_g12720 Coffea canephora HOM05D005252 ORTHO05D006788 4.3e-75 286.2 421 43.2
BcaC03g18544 Brassica carinata HOM05D005252 ORTHO05D006788 7.3e-75 285.4 435 40.0
HanXRQChr14g0443361 Helianthus annuus HOM05D005252 ORTHO05D006788 7.3e-75 285.4 418 39.7
CAN.G1681.16 Capsicum annuum HOM05D005252 ORTHO05D006788 9.6e-75 285.0 431 38.7
Dinv19082 Davidia involucrata HOM05D000783 ORTHO05D000705 9.6e-75 285.0 431 40.4
THA.LOC104820865 Tarenaya hassleriana HOM05D005252 ORTHO05D006788 1.3e-74 284.6 446 38.8
FAN28G2525 Fragaria x ananassa HOM05D005252 ORTHO05D006788 2.1e-74 283.9 432 40.0
PGR004G2027 Punica granatum HOM05D005252 ORTHO05D006788 2.1e-74 283.9 439 40.5
Atru.chr1.2124 Acer truncatum HOM05D005252 ORTHO05D006788 2.8e-74 283.5 441 40.1
arahy.Tifrunner.gnm1.ann1.2Q625H Arachis hypogaea HOM05D005252 ORTHO05D006788 2.8e-74 283.5 368 42.4
Sc20g0000830 Simmondsia chinensis HOM05D005252 ORTHO05D006788 6.2e-74 282.3 411 39.7
Thhalv10015946m.g Eutrema salsugineum HOM05D005252 ORTHO05D006788 1.1e-73 281.6 447 39.6
CiPaw.04G049400 Carya illinoinensis HOM05D005252 ORTHO05D006788 1.4e-73 281.2 427 41.5
Lsat_1_v5_gn_2_71861 Lactuca sativa HOM05D005252 ORTHO05D006788 1.4e-73 281.2 426 39.0
Sabra04G0054100 Salix brachista HOM05D005252 ORTHO05D006788 1.4e-73 281.2 410 41.2
CARHR195970 Cardamine hirsuta HOM05D005252 ORTHO05D006788 1.8e-73 280.8 434 39.4
Aa31LG11G12430 Aethionema arabicum HOM05D005252 ORTHO05D006788 3.1e-73 280.0 428 40.0
FAN19G2162 Fragaria x ananassa HOM05D005252 ORTHO05D006788 4.0e-73 279.6 349 45.3
Sp6g26990 Schrenkiella parvula HOM05D005252 ORTHO05D006788 4.0e-73 279.6 442 40.3
A02p04080 Brassica napus HOM05D005252 ORTHO05D006788 5.3e-73 279.3 433 40.0
BolC2t06801H Brassica oleracea HOM05D005252 ORTHO05D006788 6.9e-73 278.9 435 39.3
Gorai.008G054300 Gossypium raimondii HOM05D005252 ORTHO05D006788 6.9e-73 278.9 430 39.1
AL6G28290 Arabidopsis lyrata HOM05D005252 ORTHO05D006788 9.0e-73 278.5 435 42.3
BraA02t05370Z Brassica rapa HOM05D005252 ORTHO05D006788 9.0e-73 278.5 430 40.0
C02p08920 Brassica napus HOM05D005252 ORTHO05D006788 2.6e-72 276.9 436 39.4
Gohir.D12G051000 Gossypium hirsutum HOM05D005252 ORTHO05D006788 2.6e-72 276.9 430 38.8
AT5G17240 Arabidopsis thaliana HOM05D005252 ORTHO05D006788 4.5e-72 276.2 438 40.0
BcaNung00410 Brassica carinata HOM05D005252 ORTHO05D006788 7.6e-72 275.4 439 39.6
CANSAT56G0277 Cannabis sativa HOM05D005252 ORTHO05D006788 7.6e-72 275.4 438 39.5
GSVIVG01035253001 Vitis vinifera HOM05D005252 ORTHO05D006788 1.3e-71 274.6 437 37.5
Gohir.A12G052400 Gossypium hirsutum HOM05D005252 ORTHO05D006788 3.8e-71 273.1 434 38.9
Sopen02g025950 Solanum pennellii HOM05D005252 ORTHO05D006788 3.8e-71 273.1 442 38.0
Solyc02g081320.4 Solanum lycopersicum HOM05D005252 ORTHO05D006788 6.4e-71 272.3 442 38.0
ClCG05G011370 Citrullus lanatus HOM05D005252 ORTHO05D006788 2.4e-70 270.4 443 40.2
PGSC0003DMG400016732 Solanum tuberosum HOM05D005252 ORTHO05D006788 2.4e-70 270.4 450 37.1
Eucgr.F02912 Eucalyptus grandis HOM05D005252 ORTHO05D006788 3.2e-70 270.0 407 41.0
Sed0007469 Sechium edule HOM05D005252 ORTHO05D006788 7.1e-70 268.9 441 39.9
Os07g0471100 Oryza sativa ssp. japonica HOM05D005252 ORTHO05D006788 3.5e-69 266.5 451 35.7
Zm00001eb320090 Zea mays HOM05D005252 ORTHO05D006788 4.6e-69 266.2 421 37.1
CsaV3_3G021090 Cucumis sativus L. HOM05D005252 ORTHO05D006788 3.0e-68 263.5 420 39.8
AagrBONN_evm.TU.Sc2ySwM_344.1683 Anthoceros agrestis HOM05D005252 ORTHO05D006788 1.9e-67 260.8 301 45.5
ECA238G3559 Erigeron canadensis HOM05D005252 ORTHO05D006788 1.3e-66 258.1 402 40.0
HPP92_025609 Vanilla planifolia HOM05D005252 ORTHO05D006788 1.8e-65 254.2 418 37.3
Nitab4.5_0008137g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 6.9e-65 252.3 441 36.7
Rhsim08G0021900 Rhododendron simsii HOM05D005252 ORTHO05D006788 2.0e-64 250.8 342 43.0
FAN23G1936 Fragaria x ananassa HOM05D005252 ORTHO05D006788 1.7e-63 247.7 463 36.7
Peaxi162Scf00713g00214 Petunia axillaris HOM05D005252 ORTHO05D006788 1.4e-62 244.6 389 38.3
Nitab4.5_0011448g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 3.2e-62 243.4 433 36.0
Manes.01G124000 Manihot esculenta HOM05D005252 ORTHO05D006788 7.9e-61 238.8 298 47.0
Thecc.04G057900 Theobroma cacao HOM05D005252 ORTHO05D006788 3.3e-59 233.4 361 38.5
Migut.K00975 Erythranthe guttata HOM05D005252 ORTHO05D006788 1.6e-58 231.1 432 36.6
Mapoly0060s0114 Marchantia polymorpha HOM05D005252 ORTHO05D006788 2.8e-58 230.3 281 44.1
Oeu060821.2 Olea europaea HOM05D005252 ORTHO05D006788 3.7e-58 229.9 436 33.7
Carub.0006s1543 Capsella rubella HOM05D005252 ORTHO05D006788 2.4e-57 227.3 245 49.4
arahy.Tifrunner.gnm1.ann1.P1K6DT Arachis hypogaea HOM05D005252 ORTHO05D006788 5.0e-55 219.5 353 36.8
vmacro18507 Vaccinium macrocarpon HOM05D005252 ORTHO05D006788 8.4e-55 218.8 452 33.8
Hund22213 Selenicereus undatus HOM05D005252 ORTHO05D006788 1.9e-54 217.6 523 31.7
CBR_g38413 Chara braunii HOM05D005252 ORTHO05D006788 7.2e-54 215.7 352 40.6
CSS0013830 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 2.6e-48 197.2 432 31.5
unitig_748.g8447 Utricularia gibba HOM05D001485 ORTHO05D001384 1.1e-43 181.8 337 36.8
ATR0807G108 Amborella trichopoda HOM05D005252 ORTHO05D006788 2.5e-43 180.6 213 43.7
SHI24494 Sapria himalayana HOM05D005252 ORTHO05D006788 4.1e-41 173.3 628 25.6
Cre10.g437829 Chlamydomonas reinhardtii HOM05D005252 ORTHO05D006788 2.1e-37 161.0 511 27.8
AagrBONN_evm.TU.Sc2ySwM_344.1689 Anthoceros agrestis HOM05D005252 ORTHO05D006788 6.1e-37 159.5 167 47.9
Nitab4.5_0009456g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 1.4e-36 158.3 205 41.5
Glyma.02G240302 Glycine max HOM05D005252 ORTHO05D006788 2.0e-35 154.5 257 35.8
PRCOL_00004140 Prasinoderma coloniale HOM05D005252 ORTHO05D006788 3.3e-35 153.7 386 33.2
MCO06G238 Micromonas commoda HOM05D005252 ORTHO05D006788 6.3e-34 149.4 262 36.6
CDE04G0719 Ceratophyllum demersum HOM05D005252 ORTHO05D006788 1.7e-31 141.4 253 37.9
CDE04G0131 Ceratophyllum demersum HOM05D005252 ORTHO05D006788 7.5e-27 125.9 128 48.4
Psat6g212680 Pisum sativum HOM05D005252 ORTHO05D006788 1.8e-25 121.3 166 43.4
ATR0807G103 Amborella trichopoda HOM05D005252 ORTHO05D006788 3.1e-25 120.6 235 35.3
DCAR_003402 Daucus carota HOM05D005252 ORTHO05D006788 1.0e-23 115.5 151 41.1
Mapoly0060s0113 Marchantia polymorpha HOM05D005252 ORTHO05D006788 3.6e-21 107.1 119 44.5
CSS0049209 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 2.2e-18 97.8 98 48.0
TAR622G0830 Trochodendron aralioides HOM05D005252 ORTHO05D006788 5.0e-15 86.7 109 37.6
MELO3C020240.2 Cucumis melo HOM05D005252 ORTHO05D006788 2.5e-14 84.3 109 40.4
Gohir.A08G081162 Gossypium hirsutum HOM05D005252 ORTHO05D006788 8.3e-10 69.3 92 40.2
Gohir.A02G112713 Gossypium hirsutum HOM05D005252 ORTHO05D006788 3.1e-09 67.4 101 36.6
Gohir.A06G122900 Gossypium hirsutum HOM05D005252 ORTHO05D006788 4.1e-09 67.0 93 37.6
Gohir.A01G173232 Gossypium hirsutum HOM05D005252 ORTHO05D006788 7.0e-09 66.2 92 38.0
Nn2g10556 Nelumbo nucifera HOM05D005234 ORTHO05D006583 4.5e-08 63.5 218 28.0
Gohir.A01G088400 Gossypium hirsutum HOM05D005252 ORTHO05D006788 1.0e-07 62.4 112 33.9
FvH4_7g20720 Fragaria vesca HOM05D005234 ORTHO05D006583 1.7e-07 61.6 227 26.9
BcaC07g39833 Brassica carinata HOM05D005234 ORTHO05D006583 2.9e-07 60.8 233 24.0
A09p48110 Brassica napus HOM05D005234 ORTHO05D006583 3.8e-07 60.5 238 23.1
BraA09t40265Z Brassica rapa HOM05D005234 ORTHO05D006583 3.8e-07 60.5 238 23.9
CANSAT56G3438 Cannabis sativa HOM05D005234 ORTHO05D006583 3.8e-07 60.5 229 25.3
BolC8t50657H Brassica oleracea HOM05D005234 ORTHO05D006583 1.1e-06 58.9 234 23.5
Pp3c1_8530 Physcomitrium patens HOM05D005416 ORTHO05D007956 1.1e-06 58.9 219 24.2
C08p30350 Brassica napus HOM05D005234 ORTHO05D006583 1.5e-06 58.5 233 23.6
Cc02_g08680 Coffea canephora HOM05D005234 ORTHO05D006583 1.9e-06 58.2 226 23.9
COL.COLO4_05802 Corchorus olitorius HOM05D005234 ORTHO05D006583 2.5e-06 57.8 218 24.3
Nitab4.5_0000271g0220 Nicotiana tabacum HOM05D005234 ORTHO05D006583 2.5e-06 57.8 232 24.1
PSO063G5764 Papaver somniferum HOM05D005234 ORTHO05D006583 2.5e-06 57.8 232 25.4
ClCG09G020200 Citrullus lanatus HOM05D005234 ORTHO05D006583 3.3e-06 57.4 229 23.6
CsaV3_5G026250 Cucumis sativus L. HOM05D005234 ORTHO05D006583 3.3e-06 57.4 229 23.1
MELO3C025470.2 Cucumis melo HOM05D005234 ORTHO05D006583 5.6e-06 56.6 228 24.1
Thecc.10G063300 Theobroma cacao HOM05D005234 ORTHO05D006583 7.3e-06 56.2 227 24.2


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