Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_21720 Physcomitrium patens HOM05D000907 ORTHO05D021274 1.5e-113 412.9 214 100.0
SMO122G0003 Selaginella moellendorffii HOM05D000907 ORTHO05D021274 7.0e-47 191.4 205 50.2
SMO286G0008 Selaginella moellendorffii HOM05D000907 ORTHO05D021274 7.0e-47 191.4 205 50.2
Mapoly0008s0046 Marchantia polymorpha HOM05D000907 ORTHO05D021274 1.0e-45 187.6 192 52.6
CBR_g58850 Chara braunii HOM05D000019 ORTHO05D000048 3.9e-13 79.3 82 46.3
PGR102G1205 Punica granatum HOM05D000907 ORTHO05D000753 8.1e-11 71.6 160 27.5
HPP92_007943 Vanilla planifolia HOM05D000907 ORTHO05D000753 8.1e-11 71.6 176 27.8
Phvul.002G235600 Phaseolus vulgaris HOM05D000907 ORTHO05D000753 1.1e-10 71.2 158 29.7
Lalb_Chr04g0253031 Lupinus albus HOM05D000907 ORTHO05D000753 1.4e-10 70.9 146 29.5
Thhalv10020631m.g Eutrema salsugineum HOM05D000907 ORTHO05D000753 1.8e-10 70.5 171 32.7
Glyma.02G209400 Glycine max HOM05D000907 ORTHO05D000753 1.8e-10 70.5 151 25.8
Glyma.14G177500 Glycine max HOM05D000907 ORTHO05D000753 1.8e-10 70.5 146 27.4
A05p30080 Brassica napus HOM05D000907 ORTHO05D000753 2.4e-10 70.1 178 31.5
BraA05t21848Z Brassica rapa HOM05D000907 ORTHO05D000753 2.4e-10 70.1 178 31.5
BcaC05g28464 Brassica carinata HOM05D000907 ORTHO05D000753 3.1e-10 69.7 178 32.0
C05p45500 Brassica napus HOM05D000907 ORTHO05D000753 4.0e-10 69.3 182 31.3
FAN21G2517 Fragaria x ananassa HOM05D000907 ORTHO05D000753 4.0e-10 69.3 173 23.1
FAN25G3622 Fragaria x ananassa HOM05D000907 ORTHO05D000753 4.0e-10 69.3 173 23.1
AT3G19553 Arabidopsis thaliana HOM05D000907 ORTHO05D000753 5.2e-10 68.9 171 32.7
Ciclev10015109m.g Citrus clementina HOM05D000907 ORTHO05D000753 5.2e-10 68.9 160 26.2
PSO675G8970 Papaver somniferum HOM05D000907 ORTHO05D000753 6.9e-10 68.6 167 27.5
CANSAT11G1752 Cannabis sativa HOM05D000907 ORTHO05D000753 8.9e-10 68.2 146 29.5
Eucgr.B03617 Eucalyptus grandis HOM05D000907 ORTHO05D000753 1.2e-09 67.8 158 29.1
Hma1.2p1_2067F.1_g313075 Hydrangea macrophylla HOM05D000907 ORTHO05D000753 1.2e-09 67.8 166 25.9
PSO339G1451 Papaver somniferum HOM05D000907 ORTHO05D000753 1.2e-09 67.8 163 29.4
BcaB06g26015 Brassica carinata HOM05D000907 ORTHO05D000753 1.5e-09 67.4 168 30.4
Carub.0003s1939 Capsella rubella HOM05D000907 ORTHO05D000753 1.5e-09 67.4 171 32.2
CARHR094980 Cardamine hirsuta HOM05D000907 ORTHO05D000753 1.5e-09 67.4 133 33.8
Manes.03G085400 Manihot esculenta HOM05D000907 ORTHO05D000753 1.5e-09 67.4 172 27.9
Aqoxy1G00431 Aquilegia oxysepala HOM05D000907 ORTHO05D000753 2.0e-09 67.0 168 28.6
AL3G32970 Arabidopsis lyrata HOM05D000907 ORTHO05D000753 2.0e-09 67.0 171 32.2
arahy.Tifrunner.gnm1.ann1.NBN23J Arachis hypogaea HOM05D000907 ORTHO05D000753 2.0e-09 67.0 151 29.1
BolC5t33273H Brassica oleracea HOM05D000907 ORTHO05D000753 2.0e-09 67.0 181 30.9
FvH4_3g45240 Fragaria vesca HOM05D000907 ORTHO05D000753 2.0e-09 67.0 173 22.5
FAN11G0035 Fragaria x ananassa HOM05D000907 ORTHO05D000753 2.0e-09 67.0 173 22.5
BcaB04g20695 Brassica carinata HOM05D000907 ORTHO05D000753 2.6e-09 66.6 170 29.4
CDE04G1446 Ceratophyllum demersum HOM05D000907 ORTHO05D000753 2.6e-09 66.6 151 28.5
PSO349G0227 Papaver somniferum HOM05D000907 ORTHO05D000753 2.6e-09 66.6 182 26.4
CiPaw.14G134400 Carya illinoinensis HOM05D000907 ORTHO05D000753 3.4e-09 66.2 158 29.1
Potri.001G007300 Populus trichocarpa HOM05D000907 ORTHO05D000753 3.4e-09 66.2 154 28.6
BcaC05g29165 Brassica carinata HOM05D000907 ORTHO05D000753 4.4e-09 65.9 166 26.5
A01p35120 Brassica napus HOM05D000907 ORTHO05D000753 4.4e-09 65.9 171 30.4
C05p54220 Brassica napus HOM05D000907 ORTHO05D000753 4.4e-09 65.9 166 26.5
BolC5t34088H Brassica oleracea HOM05D000907 ORTHO05D000753 4.4e-09 65.9 166 26.5
BraA01t03594Z Brassica rapa HOM05D000907 ORTHO05D000753 4.4e-09 65.9 171 30.4
BraA05t22383Z Brassica rapa HOM05D000907 ORTHO05D000753 4.4e-09 65.9 166 26.5
CAN.G158.17 Capsicum annuum HOM05D000907 ORTHO05D000753 4.4e-09 65.9 154 27.3
Sp3g17610 Schrenkiella parvula HOM05D000907 ORTHO05D000753 4.4e-09 65.9 170 29.4
Aa31LG8G6300 Aethionema arabicum HOM05D000907 ORTHO05D000753 5.8e-09 65.5 195 26.2
C01p44550 Brassica napus HOM05D000907 ORTHO05D000753 5.8e-09 65.5 171 30.4
CANSAT11G1148 Cannabis sativa HOM05D000907 ORTHO05D000753 5.8e-09 65.5 148 26.4
CDE06G0509 Ceratophyllum demersum HOM05D000907 ORTHO05D000753 5.8e-09 65.5 147 28.6
Thhalv10020694m.g Eutrema salsugineum HOM05D000907 ORTHO05D000753 5.8e-09 65.5 130 29.2
Lalb_Chr17g0344301 Lupinus albus HOM05D000907 ORTHO05D000753 5.8e-09 65.5 130 27.7
Phvul.008G177000 Phaseolus vulgaris HOM05D000907 ORTHO05D000753 5.8e-09 65.5 151 26.5
EL10Ac4g10362 Beta vulgaris HOM05D000907 ORTHO05D000753 7.6e-09 65.1 158 25.9
A05p35760 Brassica napus HOM05D000907 ORTHO05D000753 7.6e-09 65.1 166 26.5
Glyma.05G155500 Glycine max HOM05D000907 ORTHO05D000753 7.6e-09 65.1 158 29.7
unitig_8.g2959 Utricularia gibba HOM05D000907 ORTHO05D000753 7.6e-09 65.1 130 30.8
HPP92_012493 Vanilla planifolia HOM05D000907 ORTHO05D000753 7.6e-09 65.1 158 27.2
BcaC09g48921 Brassica carinata HOM05D000907 ORTHO05D000753 9.9e-09 64.7 171 29.8
BolC1t04421H Brassica oleracea HOM05D000907 ORTHO05D000753 9.9e-09 64.7 171 29.8
AUR62019184 Chenopodium quinoa HOM05D000907 ORTHO05D000753 9.9e-09 64.7 159 25.8
Glyma.08G113400 Glycine max HOM05D000907 ORTHO05D000753 9.9e-09 64.7 158 30.4
Lalb_Chr13g0295001 Lupinus albus HOM05D000907 ORTHO05D000753 9.9e-09 64.7 158 28.5
MD11G1010000 Malus domestica HOM05D000907 ORTHO05D000753 9.9e-09 64.7 154 27.9
AT3G13620 Arabidopsis thaliana HOM05D000907 ORTHO05D000753 1.3e-08 64.3 130 29.2
Duzib168G0005 Durio zibethinus HOM05D000907 ORTHO05D000753 1.3e-08 64.3 160 26.2
TAR623G1168 Trochodendron aralioides HOM05D000907 ORTHO05D000753 1.3e-08 64.3 165 26.7
Potri.001G007200 Populus trichocarpa HOM05D000907 ORTHO05D000753 1.7e-08 63.9 157 29.9
PRCOL_00005500 Prasinoderma coloniale HOM05D000907 ORTHO05D000753 1.7e-08 63.9 126 36.5
Sabra01G0005600 Salix brachista HOM05D000907 ORTHO05D000753 1.7e-08 63.9 154 27.3
Ah.06g192950 Amaranthus hybridus HOM05D000907 ORTHO05D000753 2.2e-08 63.5 158 24.1
AL3G25550 Arabidopsis lyrata HOM05D000907 ORTHO05D000753 2.2e-08 63.5 130 28.5
Carub.0003s1308 Capsella rubella HOM05D000907 ORTHO05D000753 2.2e-08 63.5 130 28.5
COL.COLO4_35019 Corchorus olitorius HOM05D000907 ORTHO05D000753 2.2e-08 63.5 158 26.6
Psat2g068880 Pisum sativum HOM05D000907 ORTHO05D000753 2.2e-08 63.5 151 25.8
Duzib170G0528 Durio zibethinus HOM05D000907 ORTHO05D000753 3.8e-08 62.8 160 25.6
RcHm_v2.0_Chr5g0082951 Rosa chinensis HOM05D000907 ORTHO05D000753 3.8e-08 62.8 154 26.6
Thecc.09G209900 Theobroma cacao HOM05D000907 ORTHO05D000753 3.8e-08 62.8 149 27.5
C03p46490 Brassica napus HOM05D000907 ORTHO05D000753 4.9e-08 62.4 166 24.7
CARHR088320 Cardamine hirsuta HOM05D000907 ORTHO05D000753 4.9e-08 62.4 162 25.3
FvH4_3g45290 Fragaria vesca HOM05D000907 ORTHO05D000753 4.9e-08 62.4 117 30.8
FAN11G3702 Fragaria x ananassa HOM05D000907 ORTHO05D000753 4.9e-08 62.4 117 30.8
Psat7g073440 Pisum sativum HOM05D000907 ORTHO05D000753 4.9e-08 62.4 156 29.5
CsaV3_7G007920 Cucumis sativus L. HOM05D000907 ORTHO05D000753 6.4e-08 62.0 203 24.1
Lj1g0016443 Lotus japonicus HOM05D000907 ORTHO05D000753 6.4e-08 62.0 174 25.3
Medtr5g064750 Medicago truncatula HOM05D000907 ORTHO05D000753 6.4e-08 62.0 130 26.9
Peaxi162Scf00100g00023 Petunia axillaris HOM05D000907 ORTHO05D000753 6.4e-08 62.0 146 26.7
RcHm_v2.0_Chr5g0082861 Rosa chinensis HOM05D000907 ORTHO05D000753 6.4e-08 62.0 146 26.0
RcHm_v2.0_Chr5g0082961 Rosa chinensis HOM05D000907 ORTHO05D000753 6.4e-08 62.0 117 30.8
Atru.chr5.2406 Acer truncatum HOM05D000907 ORTHO05D000753 8.4e-08 61.6 146 29.5
AUR62000014 Chenopodium quinoa HOM05D000907 ORTHO05D000753 8.4e-08 61.6 159 24.5
Nitab4.5_0000775g0030 Nicotiana tabacum HOM05D000907 ORTHO05D000753 8.4e-08 61.6 146 26.7
QL11p032767 Quercus lobata HOM05D000907 ORTHO05D000753 8.4e-08 61.6 156 30.1
MSTRG.18012 Avicennia marina HOM05D000907 ORTHO05D000753 1.1e-07 61.2 158 25.9
BcaB06g25449 Brassica carinata HOM05D000907 ORTHO05D000753 1.1e-07 61.2 130 27.7
Duzib170G0034 Durio zibethinus HOM05D000907 ORTHO05D000753 1.1e-07 61.2 151 27.8
Hund12611 Selenicereus undatus HOM05D000907 ORTHO05D000753 1.1e-07 61.2 151 28.5
PGSC0003DMG400032227 Solanum tuberosum HOM05D000907 ORTHO05D000753 1.1e-07 61.2 146 26.0
VMungo0251G1079 Vigna mungo HOM05D000907 ORTHO05D000753 1.1e-07 61.2 158 28.5
CSS0003107 Camellia sinensis var. sinensis HOM05D000907 ORTHO05D000753 1.4e-07 60.8 158 25.9
CiPaw.05G016000 Carya illinoinensis HOM05D000907 ORTHO05D000753 1.4e-07 60.8 143 28.0
Ciclev10028240m.g Citrus clementina HOM05D000907 ORTHO05D000753 1.4e-07 60.8 145 28.3
Duzib150G0540 Durio zibethinus HOM05D000907 ORTHO05D000753 1.4e-07 60.8 154 27.3
Lalb_Chr08g0237731 Lupinus albus HOM05D000907 ORTHO05D000753 1.4e-07 60.8 154 27.9
Medtr8g085630 Medicago truncatula HOM05D000907 ORTHO05D000753 1.4e-07 60.8 147 28.6
Lj4g0009592 Lotus japonicus HOM05D000907 ORTHO05D000753 1.9e-07 60.5 165 27.3
Rhsim13G0230800 Rhododendron simsii HOM05D000907 ORTHO05D000753 1.9e-07 60.5 154 25.3
TPR.G17776 Trifolium pratense HOM05D000907 ORTHO05D000753 1.9e-07 60.5 176 22.7
TAR375G0755 Trochodendron aralioides HOM05D000907 ORTHO05D000753 1.9e-07 60.5 146 28.8
BcaC01g03986 Brassica carinata HOM05D000907 ORTHO05D000753 2.4e-07 60.1 130 26.9
A03p38290 Brassica napus HOM05D000907 ORTHO05D000753 2.4e-07 60.1 130 26.9
BolC3t16913H Brassica oleracea HOM05D000907 ORTHO05D000753 2.4e-07 60.1 130 26.9
ClCG04G003980 Citrullus lanatus HOM05D000907 ORTHO05D000753 2.4e-07 60.1 183 23.5
FAN21G1326 Fragaria x ananassa HOM05D000907 ORTHO05D000753 2.4e-07 60.1 117 29.9
SHI55251 Sapria himalayana HOM05D000907 ORTHO05D000753 2.4e-07 60.1 146 26.7
FAN25G2190 Fragaria x ananassa HOM05D000907 ORTHO05D000753 3.2e-07 59.7 117 29.1
MD03G1006800 Malus domestica HOM05D000907 ORTHO05D000753 3.2e-07 59.7 162 27.2
MD11G1009700 Malus domestica HOM05D000907 ORTHO05D000753 3.2e-07 59.7 151 27.2
SalBow3G4300 Salvia bowleyana HOM05D000907 ORTHO05D000753 3.2e-07 59.7 130 26.9
Solyc01g005920.3 Solanum lycopersicum HOM05D000907 ORTHO05D000753 3.2e-07 59.7 146 25.3
Sopen01g001930 Solanum pennellii HOM05D000907 ORTHO05D000753 3.2e-07 59.7 146 25.3
VMungo0647G0950 Vigna mungo HOM05D000907 ORTHO05D000753 3.2e-07 59.7 151 24.5
GSVIVG01037860001 Vitis vinifera HOM05D000907 ORTHO05D000753 3.2e-07 59.7 127 29.1
BcaB04g18777 Brassica carinata HOM05D000907 ORTHO05D000753 4.2e-07 59.3 130 27.7
Duzib170G0426 Durio zibethinus HOM05D000907 ORTHO05D000753 4.2e-07 59.3 160 25.0
Lj4g0009610 Lotus japonicus HOM05D000907 ORTHO05D000753 4.2e-07 59.3 138 30.4
vmacro01972 Vaccinium macrocarpon HOM05D000907 ORTHO05D000753 4.2e-07 59.3 107 32.7
arahy.Tifrunner.gnm1.ann1.GDN36T Arachis hypogaea HOM05D000907 ORTHO05D000753 5.4e-07 58.9 146 26.0
THA.LOC104822672 Tarenaya hassleriana HOM05D000907 ORTHO05D000753 5.4e-07 58.9 165 27.3
BraA03t12982Z Brassica rapa HOM05D000907 ORTHO05D000753 7.1e-07 58.5 130 26.9
CANSAT11G0876 Cannabis sativa HOM05D000907 ORTHO05D000753 7.1e-07 58.5 131 30.5
Haze_22973 Corylus avellana HOM05D000907 ORTHO05D000753 7.1e-07 58.5 153 25.5
MELO3C014206.2 Cucumis melo HOM05D000907 ORTHO05D000753 7.1e-07 58.5 159 22.0
Solyc01g034080.1 Solanum lycopersicum HOM05D000907 ORTHO05D000753 7.1e-07 58.5 146 27.4
Solyc10g049640.2 Solanum lycopersicum HOM05D000907 ORTHO05D000753 7.1e-07 58.5 129 28.7
Sopen10g020890 Solanum pennellii HOM05D000907 ORTHO05D000753 7.1e-07 58.5 129 28.7
ATR0030G013 Amborella trichopoda HOM05D000907 ORTHO05D000753 9.3e-07 58.2 127 28.3
arahy.Tifrunner.gnm1.ann1.U5C4L6 Arachis hypogaea HOM05D000907 ORTHO05D000753 9.3e-07 58.2 130 26.9
CBR_g30253 Chara braunii HOM05D000907 ORTHO05D000753 9.3e-07 58.2 166 25.9
Rhsim13G0230900 Rhododendron simsii HOM05D000907 ORTHO05D000753 9.3e-07 58.2 158 25.3
RcHm_v2.0_Chr6g0253031 Rosa chinensis HOM05D000907 ORTHO05D000753 9.3e-07 58.2 127 29.9
Aa31LG8G810 Aethionema arabicum HOM05D000907 ORTHO05D000753 1.6e-06 57.4 130 26.2
CAN.G158.16 Capsicum annuum HOM05D000907 ORTHO05D000753 1.6e-06 57.4 130 26.2
Cfa009600 Carpinus fangiana HOM05D000907 ORTHO05D000753 1.6e-06 57.4 130 27.7
Haze_10246 Corylus avellana HOM05D000907 ORTHO05D000753 1.6e-06 57.4 127 28.3
Phvul.002G052400 Phaseolus vulgaris HOM05D000907 ORTHO05D000753 1.6e-06 57.4 189 24.3
Pp3c6_16980 Physcomitrium patens HOM05D000907 ORTHO05D000753 1.6e-06 57.4 145 26.9
CiPaw.14G134300 Carya illinoinensis HOM05D000907 ORTHO05D000753 2.1e-06 57.0 125 28.0
DCAR_030825 Daucus carota HOM05D000907 ORTHO05D000753 2.1e-06 57.0 130 30.8
Eucgr.G01271 Eucalyptus grandis HOM05D000907 ORTHO05D000753 2.1e-06 57.0 190 24.7
HanXRQChr02g0056901 Helianthus annuus HOM05D000907 ORTHO05D000753 2.1e-06 57.0 159 25.2
Hma1.2p1_0196F.1_g084750 Hydrangea macrophylla HOM05D000907 ORTHO05D000753 2.1e-06 57.0 169 27.2
Rhsim11G0154300 Rhododendron simsii HOM05D000907 ORTHO05D000753 2.1e-06 57.0 127 29.1
RhsimUnG0125500 Rhododendron simsii HOM05D000907 ORTHO05D000753 2.1e-06 57.0 127 29.1
PGSC0003DMG400005455 Solanum tuberosum HOM05D000907 ORTHO05D000753 2.1e-06 57.0 129 28.7
Actinidia00385 Actinidia chinensis HOM05D000907 ORTHO05D000753 2.7e-06 56.6 181 23.2
AL1G45910 Arabidopsis lyrata HOM05D000907 ORTHO05D000753 2.7e-06 56.6 176 26.7
CiPaw.13G175100 Carya illinoinensis HOM05D000907 ORTHO05D000753 2.7e-06 56.6 125 29.6
VMungo1215G1903 Vigna mungo HOM05D000907 ORTHO05D000753 2.7e-06 56.6 127 29.1
Aqoxy7G03112 Aquilegia oxysepala HOM05D000907 ORTHO05D000753 3.5e-06 56.2 149 26.2
CSS0033812 Camellia sinensis var. sinensis HOM05D000907 ORTHO05D000753 3.5e-06 56.2 130 28.5
Cfa004648 Carpinus fangiana HOM05D000907 ORTHO05D000753 3.5e-06 56.2 127 28.3
DCAR_021962 Daucus carota HOM05D000907 ORTHO05D000753 3.5e-06 56.2 151 27.8
Potri.001G296100 Populus trichocarpa HOM05D000907 ORTHO05D000753 3.5e-06 56.2 127 29.9
Prupe.6G006500 Prunus persica HOM05D000907 ORTHO05D000753 3.5e-06 56.2 146 24.7
QL01p008175 Quercus lobata HOM05D000907 ORTHO05D000753 3.5e-06 56.2 154 25.3
SMO137G0311 Selaginella moellendorffii HOM05D000907 ORTHO05D000753 3.5e-06 56.2 140 26.4
Sc06g0004270 Simmondsia chinensis HOM05D000907 ORTHO05D000753 3.5e-06 56.2 130 26.2
Cc00_g07480 Coffea canephora HOM05D000907 ORTHO05D000753 4.6e-06 55.8 173 25.4
QL11p031756 Quercus lobata HOM05D000907 ORTHO05D000753 4.6e-06 55.8 127 28.3
Zm00001eb018230 Zea mays HOM05D000907 ORTHO05D000753 4.6e-06 55.8 129 27.9
Cpa.g.sc119.73 Carica papaya HOM05D000907 ORTHO05D000753 6.0e-06 55.5 129 29.5
ECA233G0943 Erigeron canadensis HOM05D000907 ORTHO05D000753 6.0e-06 55.5 130 28.5
FvH4_2g03970 Fragaria vesca HOM05D000907 ORTHO05D000753 6.0e-06 55.5 127 29.1
FAN15G3557 Fragaria x ananassa HOM05D000907 ORTHO05D000753 6.0e-06 55.5 127 29.1
FAN20G3049 Fragaria x ananassa HOM05D000907 ORTHO05D000753 6.0e-06 55.5 127 29.1
FAN24G1180 Fragaria x ananassa HOM05D000907 ORTHO05D000753 6.0e-06 55.5 127 29.1
Gohir.A06G103000 Gossypium hirsutum HOM05D000907 ORTHO05D000753 6.0e-06 55.5 151 26.5
Hma1.2p1_0196F.1_g084760 Hydrangea macrophylla HOM05D000907 ORTHO05D000753 6.0e-06 55.5 163 26.4
Lalb_Chr16g0376271 Lupinus albus HOM05D000907 ORTHO05D000753 6.0e-06 55.5 127 28.3
THA.LOC104798787 Tarenaya hassleriana HOM05D000907 ORTHO05D000753 6.0e-06 55.5 157 27.4
FAN15G1915 Fragaria x ananassa HOM05D000907 ORTHO05D000753 7.8e-06 55.1 146 26.0
FAN27G2367 Fragaria x ananassa HOM05D000907 ORTHO05D000753 7.8e-06 55.1 146 26.0
MD05G1096900 Malus domestica HOM05D000907 ORTHO05D000753 7.8e-06 55.1 127 27.6


User provided reference genes

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