Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 1.2e-194 682.9 334 100.0
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 1.2e-58 231.1 357 41.5
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 4.7e-58 229.2 290 46.9
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.5e-56 224.2 306 43.1
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 2.3e-52 210.3 352 38.6
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 3.9e-52 209.5 349 39.0
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 3.9e-52 209.5 322 41.0
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 5.1e-52 209.1 354 38.7
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 2.5e-51 206.8 354 38.7
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 4.3e-51 206.1 350 38.9
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 4.3e-51 206.1 358 38.5
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 4.3e-51 206.1 360 37.5
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 9.6e-51 204.9 350 36.3
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 1.2e-50 204.5 367 37.3
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 4.7e-50 202.6 343 40.2
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 6.2e-50 202.2 353 36.3
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 6.2e-50 202.2 352 37.8
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 8.1e-50 201.8 319 40.4
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 1.8e-49 200.7 350 38.9
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.8e-49 200.7 364 35.4
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 4.0e-49 199.5 367 35.7
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 4.0e-49 199.5 361 36.8
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 4.0e-49 199.5 348 36.8
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 4.0e-49 199.5 367 36.0
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 4.0e-49 199.5 344 39.2
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 5.2e-49 199.1 353 36.3
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 5.2e-49 199.1 350 37.1
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 5.2e-49 199.1 344 39.0
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 6.9e-49 198.7 351 38.7
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 8.9e-49 198.4 369 37.4
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 1.2e-48 198.0 336 38.1
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 1.5e-48 197.6 325 40.9
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 1.5e-48 197.6 350 36.3
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 2.0e-48 197.2 351 37.9
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 2.6e-48 196.8 353 40.8
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 3.4e-48 196.4 339 38.3
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 5.8e-48 195.7 325 40.3
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 5.8e-48 195.7 348 37.1
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 7.6e-48 195.3 352 34.4
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 9.9e-48 194.9 339 38.9
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 1.3e-47 194.5 344 39.5
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 1.3e-47 194.5 353 36.5
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 2.2e-47 193.7 314 41.1
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 4.9e-47 192.6 340 38.5
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 6.4e-47 192.2 368 37.0
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 6.4e-47 192.2 344 36.0
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 8.4e-47 191.8 345 37.1
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 8.4e-47 191.8 345 38.3
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 1.1e-46 191.4 341 38.7
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 1.4e-46 191.0 348 37.6
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 1.4e-46 191.0 336 37.2
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 2.4e-46 190.3 373 35.9
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 4.2e-46 189.5 328 39.0
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 1.6e-45 187.6 367 34.9
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 1.6e-45 187.6 356 35.4
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 2.1e-45 187.2 348 36.5
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 2.7e-45 186.8 359 34.8
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.7e-45 186.8 298 39.6
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 4.6e-45 186.0 333 36.6
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 6.0e-45 185.7 349 35.5
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 7.8e-45 185.3 318 40.3
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 7.8e-45 185.3 348 35.9
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 1.0e-44 184.9 357 37.5
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 1.0e-44 184.9 361 34.1
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 1.3e-44 184.5 328 38.4
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 1.3e-44 184.5 347 37.2
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 1.7e-44 184.1 355 35.8
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 2.3e-44 183.7 349 35.5
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 5.1e-44 182.6 337 37.7
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 1.1e-43 181.4 352 37.2
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 1.5e-43 181.0 370 36.8
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 1.9e-43 180.6 332 36.7
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 3.3e-43 179.9 343 35.0
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 5.6e-43 179.1 287 39.4
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 7.3e-43 178.7 277 39.4
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 7.3e-43 178.7 349 35.2
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 1.6e-42 177.6 351 34.5
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 1.1e-41 174.9 381 34.9
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 6.9e-41 172.2 364 33.5
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 2.6e-40 170.2 266 39.1
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 9.9e-40 168.3 335 36.4
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 4.9e-39 166.0 306 36.3
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.1e-38 164.9 308 37.0
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 4.2e-38 162.9 266 39.8
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 7.1e-38 162.2 287 38.7
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 1.6e-37 161.0 296 38.2
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 1.9e-35 154.1 250 39.2
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 2.8e-34 150.2 252 41.7
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 1.4e-33 147.9 258 39.5
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.4e-33 147.1 219 41.1
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 6.9e-33 145.6 220 43.2
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 9.0e-33 145.2 308 35.1
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 1.3e-31 141.4 237 37.6
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 6.4e-31 139.0 243 36.2
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 8.4e-31 138.7 340 32.1
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 1.9e-30 137.5 264 39.0
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 9.3e-30 135.2 263 37.3
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 1.0e-28 131.7 273 34.8
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 1.5e-27 127.9 444 26.1
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 2.5e-27 127.1 283 34.3
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 2.1e-26 124.0 341 32.6
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 4.8e-26 122.9 120 55.8
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 1.8e-25 120.9 261 33.7
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 7.6e-24 115.5 210 37.6
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 4.9e-23 112.8 181 40.9
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 6.7e-20 102.4 222 36.0
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 3.3e-19 100.1 288 31.2
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 2.1e-18 97.4 258 33.7
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 1.7e-15 87.8 173 37.6
SMO112G0074 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 3.8e-15 86.7 161 34.8
PRCOL_00006890 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 1.5e-11 74.7 296 26.4
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 1.3e-10 71.6 98 38.8
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 2.8e-10 70.5 103 42.7
PRCOL_00002155 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 2.8e-10 70.5 187 32.1
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 8.2e-10 68.9 159 31.4
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 8.2e-10 68.9 93 32.3
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 3.1e-09 67.0 172 31.4
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 6.5e-07 59.3 236 30.9
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 2.5e-06 57.4 63 50.8
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 7.2e-06 55.8 188 26.6


User provided reference genes

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