Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 0.0e+00 1166.0 629 100.0
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.2e-171 607.4 591 57.9
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 4.2e-140 502.7 649 49.0
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 1.0e-138 498.0 438 55.0
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 6.5e-133 478.8 648 44.3
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 8.7e-130 468.4 507 48.5
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.1e-129 468.0 492 48.8
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 1.9e-129 467.2 645 42.2
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 1.6e-128 464.2 482 48.5
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 6.3e-128 462.2 652 41.3
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 8.2e-128 461.8 644 43.8
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.4e-127 460.3 492 48.0
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 2.4e-127 460.3 526 45.2
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 3.1e-127 459.9 657 44.6
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 3.1e-127 459.9 647 41.7
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 4.1e-127 459.5 503 46.9
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 4.1e-127 459.5 649 41.8
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 1.2e-126 458.0 483 48.4
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 1.2e-126 458.0 640 42.7
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 2.6e-126 456.8 482 47.5
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 4.5e-126 456.1 651 42.7
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 4.5e-126 456.1 527 45.0
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 4.5e-126 456.1 489 46.4
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 7.6e-126 455.3 658 40.9
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 1.0e-125 454.9 635 41.6
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.0e-125 454.9 640 41.9
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 1.3e-125 454.5 529 43.5
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 1.7e-125 454.1 643 40.9
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 1.7e-125 454.1 483 46.0
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 2.9e-125 453.4 643 40.1
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 6.5e-125 452.2 522 45.2
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 8.5e-125 451.8 531 43.5
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 8.5e-125 451.8 481 47.2
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 8.5e-125 451.8 526 46.0
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 1.1e-124 451.4 483 45.3
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.4e-124 451.1 638 41.1
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 1.9e-124 450.7 484 46.7
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 2.5e-124 450.3 532 45.5
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 2.5e-124 450.3 635 46.0
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 3.2e-124 449.9 662 40.2
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 3.2e-124 449.9 541 43.3
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 3.2e-124 449.9 635 41.4
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 3.2e-124 449.9 484 46.9
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 4.2e-124 449.5 493 45.4
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 7.2e-124 448.7 484 47.5
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 9.3e-124 448.4 641 42.1
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 2.1e-123 447.2 486 48.1
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 2.7e-123 446.8 482 47.1
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 3.6e-123 446.4 657 42.6
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 6.1e-123 445.7 523 45.1
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 6.1e-123 445.7 643 41.5
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 1.0e-122 444.9 634 44.6
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 2.3e-122 443.7 525 44.0
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 3.0e-122 443.4 650 40.9
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 5.1e-122 442.6 645 40.5
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 8.7e-122 441.8 477 46.5
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 1.1e-121 441.4 653 40.6
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 1.1e-121 441.4 488 46.7
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.5e-121 440.3 489 46.4
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.5e-121 440.3 489 46.4
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 2.5e-121 440.3 662 39.4
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 4.3e-121 439.5 489 46.2
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 4.3e-121 439.5 528 43.6
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 5.7e-121 439.1 489 45.8
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 5.7e-121 439.1 536 44.2
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 5.7e-121 439.1 529 44.8
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 7.4e-121 438.7 527 45.0
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 9.7e-121 438.3 648 41.2
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 1.3e-120 438.0 486 46.9
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 1.7e-120 437.6 521 44.7
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 2.2e-120 437.2 537 43.6
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 2.2e-120 437.2 643 39.3
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.2e-120 437.2 489 45.6
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 2.8e-120 436.8 534 43.4
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.1e-119 434.9 641 41.7
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 1.8e-119 434.1 490 46.1
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.4e-119 433.7 528 44.5
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.4e-119 433.7 528 44.5
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 2.4e-119 433.7 517 44.3
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 4.1e-119 433.0 500 44.8
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 5.3e-119 432.6 489 45.6
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 5.3e-119 432.6 483 45.3
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 6.9e-119 432.2 555 42.3
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 6.9e-119 432.2 527 43.1
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 1.2e-118 431.4 555 42.2
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 1.2e-118 431.4 641 42.9
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 1.2e-118 431.4 519 43.5
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.2e-118 431.4 648 40.6
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 2.0e-118 430.6 526 43.2
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 2.0e-118 430.6 493 45.4
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 2.6e-118 430.3 530 43.0
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 3.4e-118 429.9 522 43.5
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 4.5e-118 429.5 530 42.8
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.7e-117 427.6 529 42.9
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 7.2e-116 422.2 482 44.0
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 7.2e-116 422.2 644 39.9
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 3.6e-115 419.9 437 48.3
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 2.2e-112 410.6 645 40.0
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 5.3e-111 406.0 678 35.3
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 2.0e-110 404.1 532 41.5
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.9e-108 397.5 470 43.4
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 1.5e-105 387.9 395 47.3
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 1.5e-100 371.3 385 48.1
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 1.4e-98 364.8 521 41.1
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 3.5e-94 350.1 651 35.0
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 7.2e-92 342.4 524 37.6
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 2.7e-91 340.5 359 47.1
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 5.4e-87 326.2 444 40.1
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 1.1e-84 318.5 359 43.5
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 2.8e-75 287.3 492 34.3
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 3.7e-72 276.9 583 33.1
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 5.3e-26 123.6 304 28.0
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 4.6e-22 110.5 95 51.6
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 1.4e-15 89.0 97 43.3
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 1.4e-15 89.0 97 43.3
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 7.9e-14 83.2 97 41.2


User provided reference genes

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